Pseudonaja textilis (eastern brown snake): 113437880
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Entry
113437880 CDS
T09005
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04382
Cornified envelope formation
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04518
Integrin signaling
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113437880
04518 Integrin signaling
113437880
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113437880
09142 Cell motility
04820 Cytoskeleton in muscle cells
113437880
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113437880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptex04147
]
113437880
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113437880
Exosome [BR:
ptex04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113437880
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113437880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113437880
NCBI-ProteinID:
XP_026558861
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MKGFPGLDGLPGRPGEQGLPGPPGLWGPKGTSGFPGSKGEKGSVGMIGFPGMPGPPGRPG
VDGPKGTFGAPGRNGNPGFSGFPGSKGDRGVRGPPGPPIFRPPGLGLKLKGNRGDPGLVG
QRGFPGPRGDKGAPGVRGQPGLPGRAGSPAREKGPPGDPGFPGMFGSPGLLGQKGSGGIS
GFPGMPGRSGAEGIPGSPGSPGITGLRGPKGDRGESRGIPGGVGPKGQRGDRGFQGIAGI
QGTSGDPGYPGGLGPNGQKGLPGDAGQEGPRGFPGSGGSRGNPGFPGNPGQRGAPGFPGS
PGTVGPKGYPGFPGLSGLNGLPGTKGSPGKQGPSENGLPGSAGIPGVKGQRGDPGFQGGT
PGFRGSKGPAGEMGLPGSPGVPGARGPPGISVPSRIPGKPGDAGRPGEDGLPGFQGPRGP
PGPPGPAFNQGDRGNPGRPGPPGFPGLKGDAGIPGLNGIPGASGFKGFRGDPGFMGMPGK
DGLPGDPGFPGPKGKAGPPGSPGLQGATGITQPPEEIKVPPGLIGLPGNNGNPGLNGDPG
FQGQTGPQGPKGKAGIPGQMGFNGLPGPPGVVGDPGSPGTPGLPGFEGRPGNPGLAGLPG
MPGRSIGVGYTLVKHSQSDQIPPCPVGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPR
FSTMPFIYCNIDEVCYYASRNDKSYWLSTTAPIPMMPVSSYQIAQYISRCSVCEAPSQAV
AVHSQDITIPQCPEGWRSLWIGYSFLMHTAAEGGGQSLVSPGSCLEDFRATPFIECNGAR
GTCHYFSNKYSFWLTTVEANHQFAESPVSETLKAGQLRTRVGRCQVCMKNL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggttcccagggcttgatggcctgccaggacggcctggagaacaagggttgcct
ggacctccaggtctctggggcccaaaaggaacttcaggtttcccaggctcaaaaggggaa
aagggttccgtgggcatgatcggttttcctgggatgccggggccacctgggcgccctggc
gtggatggcccgaagggaacttttggtgcgccaggaagaaacggaaaccccggattctct
ggcttccctggctccaaaggggacagaggtgtccgtggccctcctggacctcccattttc
agacccccaggcctgggcctcaaactcaaagggaacagaggagatcctggattggtggga
cagagaggattcccagggccgagaggggacaaaggagcccccggtgtccgggggcagcct
gggcttccagggagagctggatcaccagctagagagaaaggaccgccaggagacccaggt
tttccagggatgtttggttctcccgggctgttgggacaaaagggatctggtggcatctca
gggtttcctggaatgcctgggagaagtggtgcggaaggtatacctggctctcctggctcc
ccaggaattaccggattgcgtggtccaaaaggtgaccgaggggaatcccgaggaattcca
ggtggtgtgggacctaagggccaacgaggggaccgagggtttcaaggtatagcaggtatc
caaggaacaagcggtgacccaggatatccaggaggtcttggaccaaatgggcagaaaggt
ctaccaggtgatgctggacaagaaggaccacgaggctttcctggatctggtggttctagg
ggcaacccaggttttccaggtaatcctgggcaacgtggggccccaggatttcctggatct
cctggcactgtaggaccaaaaggatacccaggattcccaggactgagcggtctaaatggc
ttaccgggcaccaaaggctctcccggaaaacaaggcccgagtgaaaatggactgcctgga
tcggcaggaattccaggtgtcaaaggtcaacgaggtgacccaggtttccagggtggaact
cctggctttcgtggatcaaaaggacctgcaggagaaatgggtcttcctggaagcccaggt
gtccctggtgcgcgaggcccccctggcatctctgtgccttcaaggattcctgggaagcct
ggtgatgcgggacgtcctggagaagatgggctgccaggcttccaaggacctcgtggacca
ccaggaccaccaggaccagccttcaatcaaggtgatcgaggtaatccaggccgccctggt
cctccgggcttcccaggcctcaaaggcgatgcaggcatccctggacttaacggaatccct
ggtgcatcaggtttcaaaggattcagaggggacccaggtttcatgggaatgcctgggaaa
gatggactgccaggtgatccaggtttccctgggccaaaaggcaaagcaggccctccaggt
tctcctgggctgcaaggagctacaggcataacccaaccaccagaagagatcaaagttcct
cctggcttaatcggattgcctggaaataatggcaaccctggtttaaatggagaccctggc
ttccaggggcaaactggaccacaaggtccaaaaggaaaagcaggcatacctggccagatg
ggatttaatggcttaccaggtccacctggtgtggtaggagacccaggttccccaggaacg
ccaggactaccagggtttgaaggacgtcctgggaatccaggcctggctggattgcccggg
atgccaggtcgtagcattggggttggctataccttggtgaaacatagccagtcggaccag
atcccaccctgtccggtgggcatgaacaaactctgggacggctacagtttgctgtatgtg
gagggccaggagaagtcccacaatcaagacctgggttttgctggctcctgcctgcctcgc
ttcagcactatgccttttatttattgcaacattgacgaagtgtgctactacgccagccgc
aatgacaaatcctactggctttccaccaccgctccgatacccatgatgcccgtcagcagc
taccaaatcgcccagtacatcagtcgctgctcggtgtgcgaagcaccatcccaagccgtg
gctgtgcacagccaggacatcaccattccgcaatgtcctgaaggctggcggagtctctgg
attggctactccttcctcatgcacacggctgccgaaggcggtggccagtccctggtctct
cccggatcctgcctggaggacttccgcgccacgcctttcattgagtgcaacggtgcccgg
gggacgtgccattatttttccaacaagtacagcttttggctgaccacggtggaggcgaac
catcagtttgctgagtctcccgtctccgaaacgctgaaggcgggtcagctccggacacgg
gtgggacggtgccaagtctgcatgaaaaatttgtag
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