Pseudonaja textilis (eastern brown snake): 113437880
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Entry
113437880 CDS
T09005
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113437880
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113437880
09142 Cell motility
04820 Cytoskeleton in muscle cells
113437880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptex04147
]
113437880
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113437880
Exosome [BR:
ptex04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113437880
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113437880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113437880
NCBI-ProteinID:
XP_026558861
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MKGFPGLDGLPGRPGEQGLPGPPGLWGPKGTSGFPGSKGEKGSVGMIGFPGMPGPPGRPG
VDGPKGTFGAPGRNGNPGFSGFPGSKGDRGVRGPPGPPIFRPPGLGLKLKGNRGDPGLVG
QRGFPGPRGDKGAPGVRGQPGLPGRAGSPAREKGPPGDPGFPGMFGSPGLLGQKGSGGIS
GFPGMPGRSGAEGIPGSPGSPGITGLRGPKGDRGESRGIPGGVGPKGQRGDRGFQGIAGI
QGTSGDPGYPGGLGPNGQKGLPGDAGQEGPRGFPGSGGSRGNPGFPGNPGQRGAPGFPGS
PGTVGPKGYPGFPGLSGLNGLPGTKGSPGKQGPSENGLPGSAGIPGVKGQRGDPGFQGGT
PGFRGSKGPAGEMGLPGSPGVPGARGPPGISVPSRIPGKPGDAGRPGEDGLPGFQGPRGP
PGPPGPAFNQGDRGNPGRPGPPGFPGLKGDAGIPGLNGIPGASGFKGFRGDPGFMGMPGK
DGLPGDPGFPGPKGKAGPPGSPGLQGATGITQPPEEIKVPPGLIGLPGNNGNPGLNGDPG
FQGQTGPQGPKGKAGIPGQMGFNGLPGPPGVVGDPGSPGTPGLPGFEGRPGNPGLAGLPG
MPGRSIGVGYTLVKHSQSDQIPPCPVGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPR
FSTMPFIYCNIDEVCYYASRNDKSYWLSTTAPIPMMPVSSYQIAQYISRCSVCEAPSQAV
AVHSQDITIPQCPEGWRSLWIGYSFLMHTAAEGGGQSLVSPGSCLEDFRATPFIECNGAR
GTCHYFSNKYSFWLTTVEANHQFAESPVSETLKAGQLRTRVGRCQVCMKNL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggttcccagggcttgatggcctgccaggacggcctggagaacaagggttgcct
ggacctccaggtctctggggcccaaaaggaacttcaggtttcccaggctcaaaaggggaa
aagggttccgtgggcatgatcggttttcctgggatgccggggccacctgggcgccctggc
gtggatggcccgaagggaacttttggtgcgccaggaagaaacggaaaccccggattctct
ggcttccctggctccaaaggggacagaggtgtccgtggccctcctggacctcccattttc
agacccccaggcctgggcctcaaactcaaagggaacagaggagatcctggattggtggga
cagagaggattcccagggccgagaggggacaaaggagcccccggtgtccgggggcagcct
gggcttccagggagagctggatcaccagctagagagaaaggaccgccaggagacccaggt
tttccagggatgtttggttctcccgggctgttgggacaaaagggatctggtggcatctca
gggtttcctggaatgcctgggagaagtggtgcggaaggtatacctggctctcctggctcc
ccaggaattaccggattgcgtggtccaaaaggtgaccgaggggaatcccgaggaattcca
ggtggtgtgggacctaagggccaacgaggggaccgagggtttcaaggtatagcaggtatc
caaggaacaagcggtgacccaggatatccaggaggtcttggaccaaatgggcagaaaggt
ctaccaggtgatgctggacaagaaggaccacgaggctttcctggatctggtggttctagg
ggcaacccaggttttccaggtaatcctgggcaacgtggggccccaggatttcctggatct
cctggcactgtaggaccaaaaggatacccaggattcccaggactgagcggtctaaatggc
ttaccgggcaccaaaggctctcccggaaaacaaggcccgagtgaaaatggactgcctgga
tcggcaggaattccaggtgtcaaaggtcaacgaggtgacccaggtttccagggtggaact
cctggctttcgtggatcaaaaggacctgcaggagaaatgggtcttcctggaagcccaggt
gtccctggtgcgcgaggcccccctggcatctctgtgccttcaaggattcctgggaagcct
ggtgatgcgggacgtcctggagaagatgggctgccaggcttccaaggacctcgtggacca
ccaggaccaccaggaccagccttcaatcaaggtgatcgaggtaatccaggccgccctggt
cctccgggcttcccaggcctcaaaggcgatgcaggcatccctggacttaacggaatccct
ggtgcatcaggtttcaaaggattcagaggggacccaggtttcatgggaatgcctgggaaa
gatggactgccaggtgatccaggtttccctgggccaaaaggcaaagcaggccctccaggt
tctcctgggctgcaaggagctacaggcataacccaaccaccagaagagatcaaagttcct
cctggcttaatcggattgcctggaaataatggcaaccctggtttaaatggagaccctggc
ttccaggggcaaactggaccacaaggtccaaaaggaaaagcaggcatacctggccagatg
ggatttaatggcttaccaggtccacctggtgtggtaggagacccaggttccccaggaacg
ccaggactaccagggtttgaaggacgtcctgggaatccaggcctggctggattgcccggg
atgccaggtcgtagcattggggttggctataccttggtgaaacatagccagtcggaccag
atcccaccctgtccggtgggcatgaacaaactctgggacggctacagtttgctgtatgtg
gagggccaggagaagtcccacaatcaagacctgggttttgctggctcctgcctgcctcgc
ttcagcactatgccttttatttattgcaacattgacgaagtgtgctactacgccagccgc
aatgacaaatcctactggctttccaccaccgctccgatacccatgatgcccgtcagcagc
taccaaatcgcccagtacatcagtcgctgctcggtgtgcgaagcaccatcccaagccgtg
gctgtgcacagccaggacatcaccattccgcaatgtcctgaaggctggcggagtctctgg
attggctactccttcctcatgcacacggctgccgaaggcggtggccagtccctggtctct
cccggatcctgcctggaggacttccgcgccacgcctttcattgagtgcaacggtgcccgg
gggacgtgccattatttttccaacaagtacagcttttggctgaccacggtggaggcgaac
catcagtttgctgagtctcccgtctccgaaacgctgaaggcgggtcagctccggacacgg
gtgggacggtgccaagtctgcatgaaaaatttgtag
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