KEGG   Pseudonaja textilis (eastern brown snake): 113438107
Entry
113438107         CDS       T09005                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex04115  p53 signaling pathway
ptex04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113438107 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    113438107 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptex04121]
    113438107 (COP1)
Enzymes [BR:ptex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113438107 (COP1)
Ubiquitin system [BR:ptex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113438107 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     113438107 (COP1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_CAF1B_HIR1 zf-RING_2 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 113438107
NCBI-ProteinID: XP_026559120
Ensembl: ENSPTXG00000003864
LinkDB
Position
Unknown
AA seq 706 aa
MSGSRPSPQHPPAGPGAAGPPGSSSTSSVTTSACLGTAMATGSSAVPSRPVLVAAAVSGS
SCGGGLSRLAGTRVGSGNGAACSGTRKRPLLTPLCNGLLNSYEDKSNDFVCPICFDMIEE
AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRF
KLDHSVSSTNGHRWQIFQDLLGTDQDNLNLANVNLMLELLVQKKKQLEAESHAAQLQILM
EFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSI
IDSTEYSQPSGFSGNSQTKKQPWYNSTLASKRKRLTAHFDDLEQCYFSTRMTRLSDDSRT
SNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI
KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR
SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSP
SSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLW
NVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKS
VLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgtccggaagcaggccatcgccgcagcaccctccggccgggccgggtgctgcgggccct
ccgggctcctcctcgacctcctcggtcaccacctcggcctgcttgggcaccgcgatggcg
acgggctcctcagcggtcccctcgcgacccgtgttggtggcggccgccgtgtccggatcc
tcctgtggtgggggtctttctcgcctggcggggacccgagtcgggagcggcaatggagca
gcctgcagcggcaccagaaagaggccgcttctgactccgctttgcaacggccttctgaat
tcctacgaggacaaaagcaacgatttcgtctgccccatctgctttgatatgattgaagaa
gcttacatgacaaaatgtggacacagtttctgttataaatgtattcatcaaagcctggaa
gataacaacagatgccccaaatgtaattatgttgtggataacattgatcatctatatccc
aactttttagtgaatgagctcatccttaaacagaagcaaagatttgaggaaaagagattc
aaattggaccattcagtgagtagcaccaatgggcacaggtggcaaatatttcaagatttg
ttgggaacagaccaagacaatcttaatttggccaatgttaacttaatgttggaacttttg
gtgcagaagaaaaaacaactggaggcagagtcccatgctgcccagctacagattttgatg
gaattcctcaaggttgccaggagaaataagagagagcagttagagcaaatccagaaggag
ctgagtgttttggaagaagatattaaacgagtagaggagatgagtggtttgtattcacca
gtcagtgaagacagcactgtgccccagtttgaagctccatctccttcacacagtagcatt
attgattctacagaatatagccaaccttctggatttagtggcaattcccagactaagaaa
cagccatggtataatagtactttagcttcaaaaaggaagagacttacagctcattttgac
gatttggaacaatgctacttttctaccaggatgactcgtctatcagatgatagtagaacc
tcaaaccagctggatgaatttcaagagtgcctgtctaaatttactcgctacaattctgtt
cgacctttggcaacactatcttatgcaagtgatctctacaacggatctagcatagtctca
agtattgaatttgatcgagactgtgactattttgctattgcgggagtcacaaagaagatt
aaagtctatgaatatggcacagtcattcaggatgcagttgatattcattatccagaaaat
gaaatgacatgtaattccaaaatcagctgtatcagctggagtagttaccacaaaaacctt
ttggccagcagcgactatgaaggaacagtgatcttatgggatggattcacagggcaacgt
tcaaaagtctatcaggagcatgagaaaagatgctggagtgtggactttaatttgatggat
cctaaactcttggcttcaggttctgatgatgcaaaagtgaagttgtggtcaaccaacctg
gacaattcagtagcaagtattgaggccaaggcaaatgtgtgttgtgtaaaattcagcccc
tcatcccggtaccatcttgcttttggctgtgcagatcactgtgtccactactatgacctt
cggaacactaaacagcccattatggtcttcaaagggcaccgcaaagctgtttcatatgca
aagtttgttagtggagaagaaatagtctctgcgtcaacagatagccagctaaagctatgg
aatgtagggaagccacattgtttgcgttcttttaagggtcacatcaatgagaagaatttt
gtaggcttggcatctaatggagactatattgcctgtggaagtgaaaataattcactttac
ctgtactataaaggtctctcaaagacactgctaaccttcaaatttgacactgtcaaaagt
gtcctggacaaagaccgtaaggaggatgacacaaatgagtttgtcagtgctgtatgctgg
agggcgctaccagatggggagtccaatgtattgattgctgctaacagtcagggtacaatt
aaggtactggaactggtatga

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