Pseudonaja textilis (eastern brown snake): 113438456
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Entry
113438456 CDS
T09005
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptex04131
]
113438456 (VPS13A)
Membrane trafficking [BR:
ptex04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113438456 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
113438456
NCBI-ProteinID:
XP_026559611
Ensembl:
ENSPTXG00000005943
LinkDB
All DBs
Position
Unknown
AA seq
3192 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLQLGIWGGAVALKNLEIKENALYQFDVPFKVKAG
HIGQLNLQIPWKNLYTQPVEAVLDEVYLLIVPTASIKYDAEKEEKQQLEAKQKELQRIED
AKQKIADKDKPQEKQDTFIEKLITQVIRNLQLKISNIHIRYEDDITNKEIPLSFGISLEN
FSLQTSDQNWNPCIQDATTKLFYKLVRLDNFFAYWNVKSEMYYHGDYKESLSHLKYGIAS
TNVIPEGYTFVFRPISAKAKLRMNPRSDVDFSAPKLDLDINLQDITIELNKPQYFSIMEL
LESIDMMTRNLPYRKYRPDVPVHNNARKWWRYVTQGILEVNIQPRLQMWSWEHIRYHRNQ
VKSYKELYKIKITSKKATQETLFMLEDLEKTLDIFNITLARQQAEFEAIKAGLKIFKPGA
KQDDEDSGGWFSWMWGWSGGKSSETKQEPKGIEQFMTPQEKDKLYAAIGYSETAVDPTLP
KTYEAMKLYVKLISMSVLIRENKEKPELIKLALIDLRTTLAQRPGAEAIRFESSVSAFEV
QGMAQKKTVPCLLSSHTVHSQHNASLFTIMFETNPLDENCNQRLIIESQPLEIIYDAMTV
NSLVDFFRPPSDVHLEQITSATLTKLEEFRDKTATGLVYVIETQKVLDLKINLMSSYVIV
PQNGFYEATSNKLLLDLGHLKMSSKCRSTLSDIKVGESALEDIMSRAYDRFDIQLSSIQL
LYSRHYENWEEARRLQSSSQHILQPLDVKMELNRAMVVTDARMPKYKMYGELPLLSFNIS
DEKLKSILELIDSIPKPKNSSDSTAALQPSKLQTSSLITTPQMSTLVIPFLEPLSIAGSS
ESEDEFYDAPSSPLEDLPFFEAPLGSLSRASSFRKNTAKTEPLKNMTDFQLRFEISEVFL
QVCRLAEDIEKPILRLEILKLGTELKLRTYDMTATAFLREICLMCPEYIDNKEKPVYIIS
TLDNSVEDLLSIEYTKADINAPDLKSTYQNVLQLIKVTFSSIDIHLHTEALLSTMNFLNN
LLPTQEANTVEIVQEKEEKKEVLRKFSSKKSKHEDVCDLHLLVDMNCLRIFIREQKRWIS
EISIEGLDSQVIMKKETTEISAKLKNIIIVDCDVTALYKKALYITGKEVFSLKMITYTCA
TDGASFTNMNAVDSNIYLTVGCIQIVFVNKFVSAILAFVNNFQMAKEAITEATVQAAEKA
ATGVKELSKQSSRMALDINIKAPVVIIPQSAVSTDVLVADFGMITIKNEFLLVKTKLRYS
VPPVLDSICVKLSELKLYRSNIMNGLLQNELQLLQPLNLEVKVERNLAALWYHEIPDINI
FGRLKPINLILSEGDITTMLRTLNENLGDSFEPPSAQEKKDVLSIHSGAASVSQHSGAGT
TVVTSAVVEMHSSVKVKTTLKLDFQFDSLTLVLYSPQSKQPQVKDERDNSLKLAEFKLLL
IAAAVKMLSDGSLNASVKLTDCTLDDKRETVQKATPRMVEMKHGSEKKVMVNISYKQGRD
DTTVVDTIVEETYLCASVEFLLAVAEIFLNANAESTAANKNFRQTLTTKEQAPVQSASTM
EINLTVKNPDIVFVADLTRKDASALVATAQCEISIKNAPGMYKMTAVVEDINVKACPFFP
ALRKGNITTILQPCDLFFNMMQSGEEPQKAELSIKSLTIKVSPIIINTVITITSALFPTK
EAAEKDLSPVPPDLWDKKNITNLNMWFLEESIENKHPASVAELIPTGESLTMKIETVVIT
LEAGVGHKTIPMLSAKSSFSGEVKNWSSLINLSSRLELEVHYFNEMFGVWEPLLEPLEVE
NSDEFSPWVLELKMKKKNKKAFVESVAEEEHYKVPEYKTVITIYSQNQLNITLSKCGLLM
LSNLGTAFAEAATEASETFKKDRAPFVLINSLGVSTNVLPSESFSVLNHEPKANSFHLED
GQSLNMEYIRTKSEQDQFTAMTTLSSKVFYIWLTPQNHSTTDKIPLTKVGRSLYRVRHND
SGVVRSIVCQIDTVDGSKIVTVHSPIQIKNHFSIPLSIFEDGKCLGVALPDNEFNIPLTS
YRSLLFFRPVIDADETSEEYESSEGVSFDEMVKNFDKLLQKKCRSLKSPNNPLIINIVPM
QDTLITSTCTDDQWDLPYVVHLWSSVILRNLLPYQIAYSLEGYSTTCSALEAGCSAQIHN
ALLDQSKLELHLLNYLDKDWTTEYCLQSNQQEISFITFSHISDLDRTDLDIAIHVTYATG
QVIVAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKLPLLFSFQPKHFYHDNKVQLMVTD
SELSDHFSLDTVGSHGFVKCKSHKKEYQVGVTIHNSSFNITRIVTFTPFLMITNRSTHIL
EVAEHGNENWIPVLFQQCVPFWPENNDSKLQVRVKDSYIPSKVIQLDKQENCLLLHLDNK
LGGIVVDITLAEHSTTITFSNYHDGAAPFLIINHTKEEVIEYGQSSLTSMEETLEPNKAV
LYTWADPVGSRKLKWKCGRNSEEITQKDDLMTPFQVGTKHIFIVSFFEGLQRIILFTEDE
KVFKMTYESEKVELAEQEIIVSLQDVGISLVNNYLRQEIAYIGITSSDVIWETKPKKKSR
WKPLSVKQTDKLEKEFIEYCDNSPTENKVVELDDNIPVCLTPTGNDMKILQPYEFPVRRS
FLPALKVQYSTSEHQSSFRVQIYRIQIQNQIPGAIFPFVFYPIKPPKSISLDSEPKPFTD
VSIVMRTAGHSRISRIKYFKVLIQEMDLRLDLGFLYALSDFFTLVDELPKDQEVELFKKD
VESAQEELKNAVSTDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNRDEKHKELIPFQSL
NLLLKSIGATLTDVQDVVLKLAFFELNYNFCTTQQLQWTVIMHYSKQAIKQMYVLVLGLD
VLGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRI
TGAMAKGVAAITFDDDYQQKRREAMNKQPAGLKEGFTRGGKGLVSGFVSGITGIVTKPIR
GAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATNASEDVISLRPPRFFG
DDGVIRPYRLRDGAGSQMLQNIENGRFAKLRYFTHAMVNNTDLLMVTKSGILFVTRGTFG
QLTCEWQYTYDEFTKKPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFRTPEDAKWILSK
LEEKVKESQPKL
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaatcgctggtggtggacgttctgaaccggttcctgggcgattatgtggtg
aacctggatagttcccagctgcagctgggcatttggggaggagctgtagcacttaaaaat
cttgaaataaaagaaaatgcattgtatcaatttgatgtcccctttaaagttaaagcaggt
catattggtcagctaaatttgcaaataccatggaaaaatctttatactcagccagttgaa
gctgttttagatgaagtttatctgcttatagtacctacagctagtatcaaatatgatgct
gaaaaagaagaaaagcagcagctggaagcaaagcaaaaagaattgcaaagaattgaagat
gcaaaacaaaagattgctgacaaagataaaccacaagaaaagcaagatactttcatagaa
aagctaattactcaagttataagaaaccttcaattgaaaatttccaacatccatatacga
tacgaggatgatatcacaaataaagaaattccactgtcatttggtatctcacttgaaaat
tttagtttacagacttcagatcaaaattggaacccatgtattcaagatgcaaccactaag
ttgttctataagttagttcgattggacaacttctttgcatactggaatgtaaagtctgaa
atgtattatcatggtgactataaagaatctttgagtcacttaaaatatggaattgcaagc
actaatgtgattccagaaggctatacttttgtattccgtccgatttcagctaaagctaaa
ctccgtatgaatccgcgatccgatgttgacttttctgcaccaaaactagatctggatata
aatcttcaggatataaccattgaactgaataaaccacagtatttcagtattatggaactc
cttgaatcaattgatatgatgacacggaatttaccatataggaaatataggccagatgtt
cctgtacacaacaatgccaggaaatggtggcgatatgttacacaaggcattcttgaagta
aacatccaacctaggctacaaatgtggtcttgggaacatattcgataccataggaatcaa
gtgaaaagttataaagaactctataaaataaaaataacttccaagaaggctacacaagag
actttgtttatgttggaggatctagagaagactttagatatattcaacatcactctagca
agacaacaggcagaatttgaggctattaaagctggattaaagattttcaaaccaggtgct
aaacaagatgatgaagactctggtggctggtttagttggatgtggggatggtctggagga
aaaagcagtgaaacaaaacaagaaccaaaaggtattgaacagttcatgactccacaagaa
aaagataaactttatgcagcaattggttatagtgaaaccgctgtcgatccaacattgcca
aaaacgtatgaagctatgaagctttatgtaaaattaataagcatgtcagtgctaatcagg
gaaaacaaggagaaacctgagctgataaaacttgcattaattgatctgcgtacgacatta
gcacaacgacctggtgctgaagcaataagatttgaatcaagcgtaagtgcatttgaagtt
cagggcatggctcagaaaaaaacagtaccctgtctgttgtcctctcacacagtccattca
cagcacaatgcatcactcttcacgataatgtttgaaaccaatcccttagatgagaattgc
aatcagagactaataatagagtcacagcctttggaaataatatatgatgctatgactgtg
aatagtttagttgatttcttccgacccccaagtgatgttcatttagagcaaataacttca
gcaaccctaacaaaattggaagaatttcgtgacaagacagctacaggattagtgtatgtt
atagaaacccagaaggtcttagatttaaaaataaatcttatgtcttcctatgtcattgtt
ccacaaaatggattttacgaagctacatcaaataagctacttttggatctaggtcattta
aagatgagtagtaaatgtcggtctaccttgtcagatatcaaagttggcgaaagtgctcta
gaagatattatgtcaagagcttatgataggtttgacattcaactcagtagcatacagcta
ctttatagcagacattatgaaaactgggaggaggctcgtaggttacaatcctcatctcaa
catatcttgcaacctctagatgtgaaaatggaactgaacagagcaatggttgtaacagat
gcaagaatgcccaagtacaaaatgtatggtgagctgccattactttcttttaatatctca
gatgagaaattaaaatctattctggaacttattgacagcattccaaaaccaaaaaattca
tctgactccacagctgctctacaaccttccaagcttcaaacatcttctctgataacaaca
cctcaaatgtcgaccttagtaattccatttttagaacctctttcaatagctggatcaagt
gaatctgaggatgaattttatgatgctccaagtagtcctttggaagacctaccatttttt
gaagcacctttgggctcactgagtagagctagtagcttccgaaaaaacacagcaaaaaca
gaacctttgaaaaacatgactgatttccaattaagatttgaaatatctgaggtgttcctt
caagtgtgtcgtcttgcagaagacattgaaaagccaattcttcggctggaaattttaaaa
ttaggcactgaacttaagctcagaacatatgacatgactgctactgcttttcttagagaa
atttgcttaatgtgtccagaatatatagataataaagagaagcctgtttatattatttca
actttggataattcagtggaagatcttctatcaattgaatataccaaggcagatattaat
gctccagacctgaagagtacttaccagaacgttctgcagctgataaaggtgactttttct
tctatagatattcatttacatactgaagcacttctgagtacaatgaattttctaaataat
ctccttccaactcaagaggctaatacagtagaaattgtccaggaaaaagaagaaaaaaaa
gaagttcttaggaaatttagttcgaaaaaatcaaaacatgaggatgtttgtgatctccat
cttttggtagacatgaattgtttgcgtatttttataagagaacagaaacgttggatctca
gaaattagcatagaaggtcttgatagccaagtgataatgaagaaagaaacaactgaaata
tctgctaaattaaagaatataattattgtggattgtgatgtgacagcactatataaaaag
gctctgtatataactggaaaagaagtctttagtttaaaaatgattacatacacatgtgcc
acggatggtgcttcctttacaaatatgaatgctgttgacagcaacatttatttaactgtt
ggatgtattcaaattgtttttgtcaacaaatttgtttctgcaattttggcttttgtaaac
aattttcagatggcaaaggaagcaattactgaagccactgttcaagctgctgaaaaagca
gccacaggtgtaaaggaattatctaagcagagttcccgaatggcactggacattaacatt
aaagcacctgttgtcataataccacagtcagcagtatctactgatgttttagttgctgat
tttggtatgatcacaataaaaaatgagtttttgcttgtgaaaacaaaacttcgttacagt
gtcccaccagttcttgacagtatttgtgtgaagctgagtgaactaaaattatacagatca
aatattatgaatggattattacaaaatgaattacaattactacagccattaaatcttgaa
gttaaagttgaacgcaatttagctgctctttggtatcatgaaattcctgacattaatata
tttgggcgtctcaagccaattaatctgattctcagtgaaggggatataactacaatgttg
aggactttgaatgaaaatttaggagatagttttgagcctccatctgcacaagaaaaaaaa
gatgtgttaagcattcacagtggagctgcaagtgtctcccaacattctggagctggaaca
acagtggtgacatcagctgtggtggaaatgcactcctcagttaaagtaaaaacaacatta
aaactagacttccagtttgattccctgactctagttttgtacagcccacagtccaagcag
cctcaagttaaggatgaacgagataatagtctgaaacttgcagaatttaaattattgtta
atagctgctgctgtcaagatgttatcagatgggtcactgaatgcttcagttaagttaaca
gattgcaccttagatgataaacgagaaactgtacagaaggcaacaccaagaatggtagaa
atgaaacatggatctgaaaagaaagtcatggtgaatataagctataaacaggggagagat
gacaccactgttgtggacacaattgttgaggaaacctatctttgtgctagtgtagagttt
ctgcttgctgttgcagaaatatttctaaatgctaatgctgaaagcactgctgcaaataaa
aacttcaggcaaactctgactacaaaggaacaagctcctgtgcagtcagcatccacaatg
gaaataaatcttactgttaaaaaccctgatatagtgtttgtggctgatttaactcggaaa
gatgcttctgcattagtagccacagcacagtgtgaaatctccataaaaaatgcacctgga
atgtataaaatgacagctgttgtagaagatataaatgtgaaagcttgtccattttttcca
gctctgaggaaaggaaatattaccacgatattacaaccatgtgatcttttctttaatatg
atgcagtcaggtgaagaaccacagaaagctgagctgtcaataaaatccctaacgattaag
gtgtcacccattatcataaatacagttataactatcacatcagcacttttccctaccaaa
gaggctgcagagaaagatcttagccccgtaccaccagatctttgggataagaagaatatt
acaaatctaaatatgtggtttcttgaagaatccattgaaaacaaacatcctgcttctgta
gctgagttgattcctacaggagagtcattaacaatgaaaattgaaaccgttgttataact
cttgaagctggagttggtcacaaaacaataccaatgctttcagcaaaatcctcattttct
ggagaagttaaaaattggagtagtttaatcaatctctcatcacgtcttgaactcgaggta
cactatttcaatgaaatgtttggtgtttgggaaccattacttgagcctctagaagtagaa
aacagtgatgaattcagtccatgggttctagaattaaagatgaaaaagaaaaacaaaaag
gcctttgttgaatcagtggcagaagaagaacactataaagtgcctgaatataaaacagta
atcactatttattctcaaaaccagctgaacattactttatctaaatgtggactactaatg
ttgagtaatctaggcacggcatttgcagaagcagctaccgaagcttcagaaacattcaaa
aaagatagggccccttttgtattaataaattccttaggagtctctaccaatgttttgcct
agtgaatccttcagcgttcttaatcatgaaccaaaagcaaattcatttcatcttgaagat
gggcaaagtctaaatatggaatatatcagaaccaaaagtgagcaagaccagttcacagca
atgaccactctaagcagcaaggtattctacatttggctcactcctcagaatcattctact
actgacaagatcccattgacaaaagtgggtcgaagcttgtacagagttagacataatgat
tcaggtgttgtaagatctattgtttgtcaaattgatactgttgatgggagcaagatagta
accgtacattctccaattcagataaagaatcatttttcaattcctttgagtatatttgaa
gatggaaaatgtttaggagtagcactaccagataatgaatttaacataccattaacttcc
tataggtcattactgttttttcgaccagtaattgatgcagatgaaacttctgaagaatat
gaatccagtgaaggtgttagctttgatgaaatggtgaagaattttgacaaattgctacag
aagaaatgccggtctttaaaatcacctaataacccacttattatcaacattgttccaatg
caagatactttgataacttcaacttgtacagatgatcagtgggatttaccatatgttgtt
catttgtggtcttctgttattctccgcaatctacttccatatcagattgcctattcttta
gagggatatagtaccacatgcagtgctctagaagctggatgttctgctcagattcataat
gcattactggatcagagcaagctagaattgcatttacttaattatcttgataaagattgg
actactgagtactgcctccagtcaaatcaacaagaaattagtttcatcacattttcacac
attagtgatctggataggacagatttggatatagctatccatgtgacatatgctacagga
caagtgattgtagcaattcacagtccctattggatggtcaacaagacgggtcgaatgtta
cagtataaagccgatggaattcaccgcaaacatccacctgactacaagttgccacttctc
ttttctttccagcctaaacacttttatcatgataataaggttcagctcatggtgacagac
agtgaactttctgatcatttttccctggatacagttgggagtcatggctttgtaaaatgt
aaaagccacaaaaaagaatatcaggttggtgttactatacataatagcagctttaatatc
actagaatagtgactttcacaccttttttaatgatcacaaacagaagtacacacatttta
gaagtagctgaacatggcaatgaaaattggataccagtactttttcaacagtgtgttcca
ttttggcctgaaaataatgacagcaagttacaggttagagtaaaagattcttacattcca
tccaaagttatacaacttgataaacaagaaaactgcttactacttcatttagataacaag
cttggtggcattgttgtggatattacgctagctgaacattcaacaacaattacattctct
aattaccatgatggtgcagccccattcctgataattaatcataccaaagaagaagtaatt
gaatatggacaaagttctctcacttcaatggaggaaactttagaacccaataaagcagta
ttgtatacatgggcggatcctgtaggatccagaaaactgaaatggaaatgtggaagaaac
agtgaagaaataactcagaaagatgacctgatgacaccatttcaagtgggaaccaagcac
atttttatagtttcattttttgaaggtttgcagcgtataatcttattcactgaagatgaa
aaagttttcaaaatgacatatgaaagtgaaaaagtggaattagcagaacaagagataatt
gtatcattgcaagatgttggaatttctttagtaaataactatttaagacaggaaatagca
tacattggaatcacaagctccgatgtaatttgggagacaaaacccaagaaaaagtcaaga
tggaagccacttagtgtgaaacaaacggacaaactggagaaagagtttattgaatactgt
gataactcacctacagaaaataaagtagtggagcttgatgataatattccggtctgtttg
actcctactggtaatgacatgaaaatattgcagccatatgaatttcctgtgagaagaagc
tttttgccagctttaaaagtacaatacagtacctctgaacatcagtcttctttcagagtt
caaatctatagaatacagatacaaaatcagattcctggagccatatttccttttgtgttc
tatcccattaaacctcccaagtccatctcattggattcagaacccaagccatttactgat
gtaagtattgtgatgagaactgcaggacattctcggatatcacgcataaagtattttaaa
gttttaattcaagagatggatctccgattagatcttggtttcctttatgcgctgtctgat
ttctttacacttgttgatgaacttcccaaagaccaagaggttgaactttttaaaaaggat
gtcgaatctgcacaggaagaattaaagaatgcagtatcaactgacacatcacaaatcagt
ttatatgaatactttcatatctctccaattaagttgcatttaagcttttcactcagtact
ggtggagaagacagcaacagagatgaaaaacacaaagaactgattccgtttcaatcctta
aacctcttgttaaagagcattggggccacacttacagatgtgcaggatgttgttcttaag
ttggctttctttgaactgaactataacttctgtactacccaacaattgcagtggacagtt
atcatgcattattcaaagcaggcaattaaacaaatgtatgttcttgttcttggtctggat
gttttgggcaatccatttggattcataagagatttatctgaaggagttgaagcatttttt
tatgagccgtatcagggggctatccagggtccagaagaatttgtagaaggaatggcacta
ggattgaaagccttagttggtggcgctgttggtggactagctggtgctgcttcaagaata
actggtgctatggctaaaggagtagcagcaataacttttgatgacgattatcagcagaaa
cgacgagaagcaatgaataagcaacctgctggcctgaaggagggctttactcgtggagga
aaaggcttagtatctggttttgtcagtggtataacaggaatagtaactaagccaataaga
ggagcccaaaaggaaggagcagcaggtttcttcaaaggagttgggaaaggattagtagga
gcagtagcaagacctaccggaggaataatagatatggctagcagcacttttcaaggaatt
aaaagagctacaaatgcttctgaagatgtcataagcctgcgtcctccacgcttctttggg
gacgatggagtcattagaccgtacagattaagagatggtgctggaagtcaaatgttacag
aatattgaaaatggaagatttgcaaaactgcgatactttacacatgcaatggttaataat
acagatttattaatggttacaaaaagtggcatattgtttgtgacaagaggtacgtttgga
cagttaacatgtgaatggcagtacacttacgatgaatttaccaagaaaccattcattgtt
gatggaagaaggttgcgcattgaagcaaaggaacgagtgaagtctgtatttcatgccaaa
gaatttggaaaaataattaattttagaacaccagaagatgcaaagtggatcctctctaag
ctggaagaaaaagtaaaggagagtcaaccaaaactatga
DBGET
integrated database retrieval system
