Pseudonaja textilis (eastern brown snake): 113438928
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Entry
113438928 CDS
T09005
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03440
Homologous recombination
ptex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113438928 (PALB2)
03460 Fanconi anemia pathway
113438928 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113438928 (PALB2)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113438928 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
113438928 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
113438928
NCBI-ProteinID:
XP_026560349
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MEGLGSAVLTPQQKEQLKEKLAVLKREYNRTFHRLQRAERAARVKNDIKETVAEQNLLLG
QEEAVKNHAGNLSQLSPEEGQAGISCPGSTAETTPVLFKSGACEGSLPETSDSRRAHQPS
RRVLFDSAEPPLARNSSLHSTGGRGREQREGPSLATWGETAWEAHRREPERATEQGWESP
GFRRSSSLLDPGQRSPPKSSLRASPGGSGDVTPAMSDRGSELGRRMQTDVPAATQELPCS
LPQASQGSCHEPPSQQEGVSGLGDLAAGSRSFWASVRSEEQPGQGCEEGAGSLPVTPDAA
RGGRAVADWLRDDGEPPRRETSREDEGHSLEAGSAPLGGVTPSEEGLSSCTVVEGLMFPL
EYYVRVTRRLSRRQKEVNLEAVVQSQLGKGRKGRRGPHKGQGGNPAQPPQELPKRDDRPS
STPRMRGDASGSPPRSPESGGSGQGRRGRRLRRRTQQRTSFSTGSPPASSPGLASPALWM
VEDSPAPAALPLTPLVGQGSRLSWLPPGLLPQEFHLPEEDFGHLKSKKLKVCPEKPLGAW
DAGGSSKSPPRPPGEAPLEEGAALGQTLLSGMSGGSSALSSRELLLSPALEAGQSLLQTP
NFPLVGATPAPLQSSPGAPGASLTQAAVAASSDPGRGIGWPCSPAGIGRKAQEEAASPSQ
KPLERDKEPPRQSGPAKEVQVEAPADTLREGHLKMTSKVKNGSGSCLVDMSAVWWEGTDF
AELCMVTAEEASISLWRPLEPGQWGTVHTWHFTKLPVLQIVPLSGAHSVVCAVLGRLETA
EIRLLFGCAEEELLKAGNINAVLGLADRKLVSSCWSLQGQAVEVFSFSEVGRSHQRWALK
PPEETVLAFADVAGLQEALLGMTAMNCIVLWNLGSGQLLKKIPVGWSFPASVCHKAYSDS
GLLFLVFSHPHAKDSQLPGNPAFQIMALNPKTARSSGVMLLAPPPGVQGRYLERDVRGSS
AAAVLTSGAIAVWDLFLGQCTALLPPNSGGSWSLVRWSVTDTCLLAGQEDGSVYLYRYSG
GLHPG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggagggtctcggctcggcggttctgaccccgcagcagaaggagcagctgaaagaaaaa
ctggctgtattgaaaagagaatacaacagaacattccacaggttgcagcgagctgagaga
gcggcgagggttaaaaatgatatcaaggaaacggttgcagagcagaacctgctcctcgga
caggaggaagctgtgaagaaccatgcaggaaacctcagtcaactgtctcccgaggagggt
caggccgggatttcctgccccggcagcaccgcagagaccacgccggtcctctttaagtcc
ggagcctgtgaaggcagcttgccagaaacgtcagattccagaagagcccatcagcctagc
cgaagggtgctctttgattctgcggagccacctctggcgaggaacagcagcctgcactca
accggcggacgtggcagagagcagcgagaagggccttctttggccacatggggagaaacg
gcgtgggaggcgcatcggagagagcctgagagggccacagagcaaggctgggagtctcca
ggctttaggagaagcagcagcctcttggaccccggccagaggagcccccccaagtcctcc
ctgcgggctagcccaggagggagtggcgatgtgactcctgcaatgtcagaccgaggctct
gaactgggcaggcggatgcaaacggatgttcctgcggcaacgcaagaacttccttgttcc
ctgccacaagcgagtcaagggtcctgccatgagcctccgagccaacaagagggtgtttcc
ggtctgggggacttggctgctgggagcaggtccttctgggccagtgtgcggagcgaggag
cagcctgggcaggggtgcgaggaaggtgcgggaagcttgccggtgacccctgacgctgct
cgaggaggcagagctgttgccgattggctcagagacgacggggagccccccaggagggag
acaagcagggaggacgaagggcacagccttgaagcggggtcagcccccctgggaggggtc
acccccagtgaggaggggctgagctcttgcacagtggtggagggactcatgttccccttg
gagtattacgtgcgcgtgacccggaggctctccaggcgccagaaggaggtgaacttggag
gcggttgtccagagccagctgggcaagggcaggaagggccggagaggcccccacaaaggg
cagggggggaatccggcccagccgccccaggagctccccaaaagggacgaccggccgagc
tcaactcccaggatgcgaggagatgcttctgggtctccacctcgctctcccgagagcggc
gggtctggccagggcaggaggggccggaggctgagaaggaggacccagcagaggacttcc
ttcagcacaggcagcccaccagcaagctccccaggtctggcttctcctgccctctggatg
gtggaggattctcctgctcctgcagccttgcctctcacccccctggttgggcaggggtcc
cgcctcagctggctgcctcccggcctgctgcctcaagagttccacctgcccgaggaggat
ttcggccacctgaaatccaagaagctcaaagtctgtcccgagaagccactgggggcctgg
gatgccggggggtccagcaagagtcctcccagaccccccggggaggctcctctcgaggaa
ggagcagcgttgggccaaaccctcctgtccgggatgagtgggggctcctccgctctttct
tcccgtgagctgctcctctccccggccttggaggctggacagagccttttgcagacccct
aattttcccctggtgggggcaaccccggctcccctgcagtcctccccaggcgcccctggg
gcctctcttacgcaagcagcggtggcagcgtcttccgacccaggaaggggcatcgggtgg
ccttgttcgccagctggcatcggcaggaaggcccaggaagaagccgccagcccatcgcag
aagccacttgagcgtgacaaggagccccccaggcagagcggcccagcaaaggaggtccag
gtggaggcaccggcggacactctgagagaaggacacttgaaaatgacttcaaaagtgaag
aacggctccggctcctgcttggtggacatgagtgccgtgtggtgggaaggcactgacttc
gcagaattgtgtatggtgacggccgaggaagcgtccatctctctctggaggcctctggaa
cctggccagtgggggacggtgcacacctggcactttacaaagcttccagttcttcaaata
gttcccctgtcgggagctcacagcgtggtgtgcgcagtgctggggcgcctggagacagct
gagataaggcttttgtttggctgtgctgaagaggagctgctcaaagctggaaacataaac
gctgtccttggtctggccgataggaagctggtcagcagctgttggtcactacaaggtcaa
gcagtggaagtcttctctttctctgaggtgggaaggagccaccagcgttgggctttgaag
cccccggaagagaccgtcttggcgtttgccgatgtggctggactgcaggaggctctgctt
ggaatgaccgccatgaactgcatcgtgctctggaacctgggaagcgggcagttgctgaag
aagatcccggtgggctggtccttccctgcgtccgtctgccacaaggcctactctgattcg
ggcctcctgttcctggtcttcagccacccacacgccaaagacagccagctgcctgggaac
ccggccttccagatcatggcgctcaaccccaagaccgccagaagctctggggtgatgctc
ttggccccgccccccggcgtccaaggaagatacttggagcgcgacgtgaggggctcttcg
gccgcagctgtcctgacatctggagccattgcggtctgggatttatttctggggcagtgc
actgcgttgctgccccccaactctggaggcagctggtccctggtcaggtggtcagtcacg
gacacttgcctgctggctgggcaagaagacggctcggtttacctctataggtactcaggg
gggctccaccccgggtga
DBGET
integrated database retrieval system
