Pseudonaja textilis (eastern brown snake): 113439291
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Entry
113439291 CDS
T09005
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04120
Ubiquitin mediated proteolysis
ptex04137
Mitophagy - animal
ptex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113439291 (PRKN)
04120 Ubiquitin mediated proteolysis
113439291 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113439291 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptex04131
]
113439291 (PRKN)
04121 Ubiquitin system [BR:
ptex04121
]
113439291 (PRKN)
03029 Mitochondrial biogenesis [BR:
ptex03029
]
113439291 (PRKN)
Enzymes [BR:
ptex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
113439291 (PRKN)
Membrane trafficking [BR:
ptex04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113439291 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
113439291 (PRKN)
Xenophagy
Other xenophagy associated proteins
113439291 (PRKN)
Ubiquitin system [BR:
ptex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
113439291 (PRKN)
Mitochondrial biogenesis [BR:
ptex03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113439291 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
113439291
NCBI-ProteinID:
XP_026560876
Ensembl:
ENSPTXG00000008480
UniProt:
A0A670YTR4
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MIVFVRFNSSHGFPMEVDSDTSIFQLKEAVAKRQGVPADQLRVIFAGKELRNDLTLKNCD
LPQQSIVHIIQNQRKSENENPRILISSDGREPTSLTRVDLSTNLLPSDSLGLAVILDNRV
PIPSEAAKDSSFYVFCKSFCQAVKPGKLRVRCKTCKQGTLTLARDPSCWEDVLIPNSISG
ICHYQNCSGEIAEFYFKCGAHPTSDSETSVPLNLITTNTRYISCITCTDVRSPVLVFPCI
HHHVICLDCFHLYCVTMLNNRQFVHDPIFGYSLPCVAGCPDSLIKELHHFRILGDEQYNR
YQGYGAEEYVLQMGGVLCPTPGCGAGLLPESEMRKIVCEARNGLGCGFVFCRECKEEYHE
GECHSFFKSPGATAQMGFEIDKHAAMKARWEDASKETIKRTTKPCPKCHVPVEKDGGCMH
MKCPQSQCKFEWCWKCSLEWNRTCMGDHWFD
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccaatggaggttgattcagat
accagcatcttccagctcaaggaggcggttgctaagcgacagggagttccagctgaccag
ttacgtgtgatttttgcaggcaaggagctcaggaatgacttgacactgaagaactgtgat
ctaccccagcaaagtattgttcatattattcagaatcagcggaagagtgagaatgaaaac
cccaggatcctcatctcaagcgatggaagggaacccacaagtctcactcgtgtggatctt
agtaccaaccttttaccttctgactcattgggactagcagtgattttggacaacagagtt
cctattccatcagaagctgctaaggacagcagtttttatgttttctgcaaaagtttctgc
caagctgtgaaacctgggaaactccgggttcgttgcaaaacatgcaaacaagggacactg
actttggcacgggatccatcttgctgggaagatgttttgattccaaacagcatcagtggg
atttgtcattaccaaaactgcagtggagaaatagcggaattctactttaaatgtggagca
cacccaacctctgacagtgagacatctgtgccgctgaacctcattacaacaaatactcgg
tacatctcatgtataacctgtacagatgttaggagtcctgtgttagtgttcccatgtatt
catcaccatgtcatttgcctggattgttttcacctctactgtgtgactatgttgaacaat
cgccagtttgtccacgatcctatctttgggtattcgttgccatgtgtggcgggctgtcca
gattccttgattaaagagctgcatcatttcagaattcttggagacgagcagtacaatcgt
tatcaaggctatggtgcagaagaatacgttctgcagatgggcggtgttttgtgtcccact
ccaggatgcggagctggcctgcttcctgaatcagaaatgaggaaaatagtgtgtgaagca
agaaacggactgggttgtgggtttgtgttctgccgtgaatgtaaagaagaataccatgaa
ggggaatgccatagctttttcaaaagtccaggagccaccgctcaaatgggatttgaaatt
gataagcatgcagccatgaaagctcgttgggaagatgcatccaaagaaacaataaaaaga
acaaccaagccatgccctaaatgccatgttccagtagaaaaggacggtggatgtatgcat
atgaaatgtcctcaatctcagtgtaaatttgaatggtgttggaaatgtagcctagaatgg
aacagaacgtgcatgggagatcactggtttgactga
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integrated database retrieval system
