Pseudonaja textilis (eastern brown snake): 113439397
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Entry
113439397 CDS
T09005
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113439397 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113439397 (PNLDC1)
Enzymes [BR:
ptex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113439397 (PNLDC1)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113439397 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
113439397
NCBI-ProteinID:
XP_026561039
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MRRRESSLGGMDVGAAQFPEMLPWLEELVLGCDFVGLDMEFTGLHSDSQPSLFDLPAEWY
RKGRQSVQRFTVNQLGLSIFYKGMSNEYIAHSYNFFLFPATFGQMDSEFSCQTSSIQFLS
HYDFDYNKFLKDGIPYMNETQEKKLQHLLSGNWMVQSFDKDKVKKVIDQVTCWISSAEEE
DSMVLHDIYGFQVIELQLILRKAFPDIWTIPLEDEKLMVRKMNPQYRWVLENTAFDPCQR
EQILYSARGFTNIFQTLVRAKKPLVGHNMLMDLLYLHEKFYKPLPENYEEFKDNIHFLFP
VLLDTKNIAKATWKEFQFRQVSYLFELYETLCSIVNPTDQLCPEIFHSDDSFRYAINKCP
HEAAYDAFLCGAVLLKIAHLLLCRKTGHQTAAPTFSQYLDVLAAYMNQVNLIRGAIQKIN
FSGADDLTTRPPLLLATVKGWRGATEEQIHQELRSFCRFDVRRLRKNQFLLLSNHLKDIR
IVMKVYKAHPNLQISVYHHWKHSPRVTSFLRICGIVASWSLLAFLLGGSYSCRV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagagaaagcagcctgggcgggatggatgtgggggcagcgcagtttccagaa
atgttgccttggttagaggagcttgtcctgggctgcgactttgttggccttgatatggaa
ttcacaggtttgcattctgacagtcagcctagtctctttgatttacctgctgagtggtat
cggaaaggcagacagagtgttcagcggtttacagtgaatcaacttggtttgtccatattt
tacaaggggatgtcaaatgagtatattgcacattcgtataacttcttcctattccctgcc
acatttggccaaatggattccgagttctcctgccaaacatctagtattcaattcctgtct
cattatgactttgactataataagtttcttaaagatggaatcccttatatgaatgaaaca
caagagaagaaacttcagcatctgttatctggtaattggatggtccaaagttttgataaa
gacaaggtgaaaaaagtgattgatcaagtaacttgctggatatcctcagcagaagaggaa
gattctatggttctgcatgatatatatggctttcaagtaattgaactacagctcattcta
agaaaagcttttccagatatttggactattcctttggaagacgaaaaattgatggtgaga
aagatgaatccacaataccgctgggtcctggaaaacacggcttttgatccatgtcagaga
gaacaaattctttattccgcaaggggctttaccaacattttccagacacttgtgagagct
aagaagccgctggtgggacacaatatgctgatggatcttctgtatctacacgagaaattt
tacaagccccttcctgaaaattatgaagaattcaaagataacattcacttcctgtttccg
gttcttttggatacaaaaaacattgccaaagccacgtggaaggaattccagtttcgtcaa
gtttcttatcttttcgaattgtatgaaacactgtgcagcattgtgaatccaacagaccag
ctttgtccagagatctttcactcagatgattccttcagatacgctataaataagtgtcct
catgaggccgcctatgatgcattcctctgtggagcagttcttcttaaaatagctcacttg
ctcctttgcagaaaaactggtcatcaaacagcagcaccaactttttctcagtaccttgac
gtattagctgcatacatgaatcaagtgaacttgattcgaggcgcaattcagaaaattaat
ttttctggtgcagatgacctaacaacacgtccacccctcctactagccactgtgaagggg
tggcgtggggcaactgaagagcagattcatcaagagttgaggtctttctgcaggtttgat
gtccgtcggctaagaaagaaccagtttctcctgctctccaatcatttaaaagacatcagg
atagttatgaaagtatataaagcccatcccaacctgcagatttctgtgtatcaccattgg
aagcattctccacgagtgactagcttcctacgaatatgtggcattgtggcttcttggtct
ctgctggctttcttgcttggaggctcttatagttgtcgtgtgtaa
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