Pseudonaja textilis (eastern brown snake): 113440331
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Entry
113440331 CDS
T09005
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptex03009
]
113440331 (IGHMBP2)
03012 Translation factors [BR:
ptex03012
]
113440331 (IGHMBP2)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113440331 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
113440331 (IGHMBP2)
Ribosome biogenesis [BR:
ptex03009
]
Eukaryotic type
Other ribosome biogenesis factors
113440331 (IGHMBP2)
Translation factors [BR:
ptex03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113440331 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
ResIII
Helicase_RecD
Viral_helicase1
DEAD
AAA_22
nSTAND3
UvrD-helicase
AAA_16
SLFN-g3_helicase
Flavi_DEAD
IstB_IS21
AAA
AAA_25
PhoH
DnaB_C
NTPase_1
DAP3
ABC_tran
AAA_18
UvrD_C_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
113440331
NCBI-ProteinID:
XP_026562472
Ensembl:
ENSPTXG00000001821
UniProt:
A0A670XZ48
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MAALVEEFVSRQMELLKEEREAEISEARAWQEGISLKELQRRGVCLLKLELHCQKTGLYG
HLLVTLQPQKHGLDTELPSNNFGPGDIAGLYEATGQNNQICTGIVTRIASNSITIAVDEP
QSNLVSLDQENLYRLLKLANDVTYNRLKRALSTLNHYGSGPASDLIDVLLCSSEPSAASD
TKLLKFYNESLDASQKEAVCFSLAQKELAIIHGPPGTGKTTTVVEIILQAVEQGLKVLCC
APSNIAVDNLVERLSNRNLRILRLGRPARLLESIQHHSLDAVLLRGDNAQIVADIRKDID
QAFMKARKTQDKGERKHFFNEIKILRKELKEREEMAMSETLQKAHVILATNTGASSDGPL
KLLPENHFDLVVIDECSQALEASCWIPLLKVRKCILAGDHKQLPPTIISHKAAAQGLSLS
LMERLIQKCGDRVVKMLTVQYRMHQAIMQWASTEMYDGHLSAHCSVAQHLLKDLPGVAPT
EDTSIPLLLIDTAGCGLFELEVEEEQSRGNPGEVQLTGLHIEALMEAGVKAKDVAVIAPY
NLQVDMLRKHLYQKYPQLEIKSVDGFQGREKEAVVFSFVRSNRKGEVGFLAEDRRINVAI
TRARRHVAVICDSHTVSSHSFLKRLMEYMNTHGEVRTAFEYLDDIVPGNYTPKNSLGPRN
QEKRLKCSTAPVPKALGGKPKGRPAPRPRERLTECSLENTGKVTTSETKENENSCKYKAQ
ILEFLDSGEVQLDFPSSLNAHDRMLIHQLAEEYGLKHLSTGEGSARHISIHRRDSPTELS
LGDTVVCQAEVIQGCSKEIDAGSEERESGAGPGATDLKTLHAERMKRERDKKEERVKQSR
ESNVNLREVIGKKEKNTGGKASRKSKKEIAAEEDFDSMISAAIKADNTCGFSKCKASITT
LGQLCQHCNRRYCLSHHIPEVHGCGEKARANARQRISKEGILYPGSGVKDKSLDPDKRAH
LQRCLDQKLSELSKQRKSKRKDREK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttggtggaagagtttgtgtcccggcagatggagttgctaaaggaggagaga
gaagccgaaatttcggaagcaagagcatggcaagaaggaatctccttgaaagagctgcag
cgtagaggagtttgcttactgaaacttgaactacattgtcaaaaaactgggctatatggc
catctgcttgtaactttacagcctcaaaaacatggcttagatacggagttaccttccaat
aattttgggcctggtgacatagcggggctttatgaagcaactggacaaaataatcagatc
tgcacaggaattgtcactcgaatagcttccaattcaattactatcgcagttgatgagcct
caaagtaaccttgtgagtttagatcaggagaatttgtaccgtctgttgaaacttgccaat
gatgttacatacaacagactcaaaagggctttaagtacacttaatcactatgggtctggt
ccagcatctgatcttattgatgtgctgttgtgttcttctgaacctagtgctgccagtgat
acaaagcttttgaagttctacaatgaatccctggatgcctctcagaaggaggcggtttgc
ttttcattggcacagaaggagcttgctatcattcatggaccacctggaactggcaagaca
acaactgtagtggagataatactccaagctgtggagcaaggcttgaaagttctctgttgt
gctccctcgaatattgcagtcgataacttggtggaaaggctctcgaatcgtaatctgcgg
atcctgcgtcttggtcgcccagctcgtctcctagagtccatacagcaccattcactggat
gctgtcctgttgcgtggagataatgcccagattgtagcagatatcaggaaggacattgat
caagcatttatgaaagctaggaagacccaagacaaaggagagagaaaacatttttttaat
gaaattaagatactgagaaaggaactgaaggaacgagaagaaatggctatgtctgaaact
ttgcaaaaagctcatgttattcttgctacgaacacaggtgcctcttctgatggtccgttg
aagcttcttcctgagaaccactttgatcttgtggtgattgatgaatgttcgcaagctctt
gaagcaagctgttggatcccactgctaaaggttaggaagtgtatcctggctggtgatcac
aaacagctgcctcccacaatcatttctcacaaggctgctgcacaaggtctttctcttagc
ttaatggaacggctgattcagaaatgcggggaccgtgttgtgaagatgctcactgttcag
taccgaatgcaccaagccataatgcaatgggcttccactgagatgtatgacggccatctc
tcagctcactgttctgtcgcacaacatttactgaaagacttaccaggagtggcccccaca
gaagacactagtatcccattgttgcttatagatacagctggttgtggcttatttgaactt
gaagtggaagaagaacaatctagaggaaacccaggtgaggtgcagcttaccggtttgcat
atagaagctttgatggaagctggtgtgaaagccaaagatgtagctgtcattgctccttac
aatcttcaggtcgacatgctaagaaaacatctgtatcagaagtacccacagctggagatt
aaatcagtggatggcttccaaggaagagaaaaggaggcagttgttttttcttttgtaaga
tccaatcgaaaaggtgaagtgggattccttgccgaagacaggagaataaatgttgcaatt
acccgggcccgacgtcatgtggcggtaatctgtgactctcacaccgttagcagccatagt
tttcttaaacgactgatggagtatatgaacacccatggagaggtgcgcacagcctttgaa
tacctggatgacattgtacctggaaactacactcccaagaattctctgggtccccgtaac
caggaaaagagacttaaatgcagcactgccccagtcccaaaggctcttggagggaaacca
aaaggaagacctgccccaaggcctagagagaggctaacagaatgttccctggaaaacacg
ggcaaagtcacaacatcagaaaccaaagagaatgaaaactcatgtaaatataaagcacaa
atattggagtttctggacagtggtgaggtccaactggatttcccttcctctttaaacgct
cacgatagaatgcttatccatcagttggctgaagaatacgggctgaagcacctgagcacc
ggagaaggcagcgcacggcacataagtattcataggagagattctcccacagaattatct
ttgggagatactgtggtttgtcaagctgaagtaattcagggctgttcaaaagaaatagat
gcaggcagtgaagagagggagagcggtgctggcccaggggccacagatctaaaaacgttg
catgcggaacggatgaaaagagagagagataagaaagaagagagagtgaaacaaagccga
gaatctaatgtaaatcttcgggaagtaattgggaaaaaagaaaaaaacactggaggaaag
gcatccagaaaatccaagaaggaaattgcagccgaggaagattttgattctatgatctct
gcagcaattaaagcggacaatacatgtggtttctccaaatgcaaagccagcataacaacc
ctgggacagctctgccagcattgcaacagacgctactgtctcagccaccatatcccagag
gttcatggatgtggggagaaagccagagcaaatgcccggcagagaatcagcaaggaaggg
attctctatcccgggagtggggtgaaggacaagtccttggatcctgacaagagagctcac
ctccagagatgcttggaccagaaactcagtgaactgtccaaacagcgaaagagcaaaagg
aaagatagagagaaataa
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integrated database retrieval system
