Pseudonaja textilis (eastern brown snake): 113440756
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Entry
113440756 CDS
T09005
Symbol
RGPD4
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03013
Nucleocytoplasmic transport
ptex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113440756 (RGPD4)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113440756 (RGPD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113440756 (RGPD4)
03110 Chaperones and folding catalysts [BR:
ptex03110
]
113440756 (RGPD4)
04121 Ubiquitin system [BR:
ptex04121
]
113440756 (RGPD4)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113440756 (RGPD4)
Chaperones and folding catalysts [BR:
ptex03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113440756 (RGPD4)
Ubiquitin system [BR:
ptex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113440756 (RGPD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_16
TPR_14
TPR_8
ANC1_spectrin
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
113440756
NCBI-ProteinID:
XP_026563146
Ensembl:
ENSPTXG00000000398
LinkDB
All DBs
Position
Unknown
AA seq
3024 aa
AA seq
DB search
MMRRSRAEVDRYVSSLQASAPSPKEKSMKGFFFAKLYYEAKEYELAKRYISIYLSVQERD
PKAHKFLGQLYEAENNIEKAVGCYKRSVELNPIQKDLVLKIAELLCSNDITDGRAKYWVE
RAAKLFPGSPSIFRLKESLLDCRSENGWNQLFDLIQTELYTRPDDVYVNIRLVKLYLSNN
RLGDAVAHCQEAEKKISLRSNLEWCSCVVQTFKEYLESVEDSESDKISWRKIQRDLLLAY
CNLVVMKLSARDVEESRASLESFDHTLHLVKSHADGSDELSVTFLEMRGHFYMHAGTLLL
KMAQQSEMQWRAVSELAALCYLHAFQVPRPKSKLIKGDHAEQEKLEMLACDRQSQSGFML
LNLSYGKQDFLTEVVESFANESGHSALFYALFGDVSSKENSFLGTDDIKNVGIQAPECIE
LARYDTGAIRAHDGSLQHITWLGLQWNSAQAVPAIRKWLKQLFHLPQETSRLETNAPESI
CMLDLEVFLLGVIFTSNLQLQEKFHTKYTVHQPRFLPLPICKQLCTERQRAWWDSVYTLI
HKQAVPGTAAKVRLLVQHELNTLRALGKHGLQPSLIVHWAKSLLKTGCSLNSFYDQREYI
GRSVYYWKKVLPMLETIKKKRSISEPIDPLFKHFHSEDIQLSQVEEYQEEARIAFAILDA
VDGKTDDATHAFEAINNIVAYWNLALIFQRKAEEIENDGLSPEEQEEGRKYLKKCRDYLL
KIIDESCMDSSVIEKLPVSIRTVKEMLEGIMQDLGDNGEERSLVNNLSHPLESEVKHSTP
SPTAFSLSPSKSYKFSPKTPPRWVEDQKSLLQMICQQVESIKHEMQEMKLNNSNTNLSNR
WPAENYSTETMPDGYQGAQNFHGAPLTVATTGPSVYYNPSPVYNSQYLLRTAATNVTPTK
APVYAMNRLTPQQHLYTYQQPMHTPPLPNTSACMFSQDMYGAPLRFDSSATGILSPRGNE
DYYNYSVPPTSTNPPLPEPGYFTKPSTAPPVSRSAETKVIEFGRPNFGQPPISADGAKPS
LIISAQPTTFKFNSNFKSNDGDFTFSSPQVVGQPHNANYSNSDSLLGLLTSDKPIKEDRY
SGQKPLAEYVTGQRNIFSFGGKNSSGVSLTDKMGHTQSKPSGFGKDDMFGCQELGKPVFG
MPNLDGANRSHETDGGSVHGGEEEDDGPHFDPVVPLPDKIEVKTGEEDEEEIFCNRAKLF
RFDSECREWKERGVGNVKILRHKITGKIRLLMRREQVLKICANHYINPDMTLKPNAESDK
SFVWHALDYADELPKPEQLAIRFKTPEEAILFKHKFQEAQNSLKGAGSDLGRQVVPNIRP
SRETASQDRKEPGKAETGFLNSGFHFKNGGTPFSGSSQVPSPDVNSTAKNTNVRSTFSIT
SGGTTPASFSFGKDVSGTHTTYGFGEQFMLKKDQWECSTCLVRNKITSQKCIACQSPSPF
NWEAQAVLPEESSASLKPGSEGAQNTFGPLSTTMENQWECKNCSRKNEASASHCTSCKNP
SGISNPTFGSQTPFKFGQTDTSKDTSKVPQSGFGAAFMKKEGQWDCGICLVRNEGSLPAC
AACQAPNPSCDASPLSANGSPAAFGFKSKLSESAGKPQETGFKCEVSGKTFKFGIPTEPE
KSPFPFQVPATTEPKAVIKGGFNFSMPIPPGEFKFGIQDSSEAVAKSEQNEEVNVFKSID
DKEKKSEKETETQLPSACNQPSSDLVFGHQSDTFTFADLAKSGEGFKFGQKDPNFKGFTG
AGEKLFSSQISKMSPKLNTSADLEKDDDEYKTEDSDDIHFDPVVQMPEKVELVTGEEDEK
VLYSQRVKLFRFDAEIKQWKERGVGNLKILKNEVNGKLRVLMRREQVLKVCANHWITTTM
NLKPLSGSDKAWMWLANDFSDGDAKLEQLAAKFKSSEQAEEFRLKFEECQRLLLDIPLQT
PHKLVDTGKTAELIQKAEEMKSGLKDLKTFLTDDKTKLIDEEKTLVSSSNSSDLVIKPHA
ESTGPTLEWDNYDLRGEALDDSTDSSVYPMPRASSPVRKNLFRFGESATGFNFSFKSALS
PSKSPSKQNQSRVSVGTDEESDVTQEDERDGPYFEPVVPLPDLVEVTSGEENEQVVFSHR
AKLYRYDKDANQWKERGIGDIKILQNYDTKQVRVVMRRDQVLKLCANHRITPNMNIQQMK
GAERAWVWSACDFAEGERKMELLAVRFKLQDVADSFKRIFEEAKHAQEKDILITPLSSRT
NTPKESPCGKIAVAVLEETTRERTDLKEAEETVVEVAETPVVESTAEMPTKAVVSPPKFV
FGSESVKTIFNDKKSKPFTFGNTSATGSLFGFSFNAPPKSQSDDSVCQTMNAKKSDSSQD
AMACRHAEHQENSSAANWKPSEGQGETPAATSKAEAVSNFSFKTLEKAEIKKEPNTIPSD
DVLIVYELTPTADQRALAESLKLPPTFFCYKNKPGYLSEDEDDEDYETAVRRLNGKLYLE
EPKENSEIMNTSAVEHSDPETSNEVIVVWEKKPTPKEKAKAEALKFPPTFLCGINSDTDE
DNDNLDFETELRKTQETKESQAEEIITSTDDVCSGEEGGPDVSCSITEVSDSTTNLRCTT
WDTLRTDGNSTPETEQSFKNLLGTDDKPVDLSNKKECDSSSEASVNQENNPFSFALHNVS
SLSFADLASNNSGDFAFGSKADKNFKWANTGAAVFGIQAATKGDCDDDASDEDVVHSDDI
HFEPIVSLPEVEVKSGEEDEEIIFKERAKLYRWDREVNQWKERGIGEIKILFHMQKKCYR
ILMRRDQVLKVCANHIITKAIDLKPLNSSNNAMVWTATDYADGEAKVEQLAVRFKTQELA
DTFKKKIEECQLILSEEQKGHVSFAEKFSKESNPVVYLDISADDEPLGHVRIELLSNVVP
RTAENFRALCTGEKGFGYRNSRFHRIIPDFVCQGGDITKHDGTGGQSIYGNSFEDENFEI
KHTGPGLLSMANCGRNTNNSQFFITLKKAEQLDFKHVVFGFVKDGMDIVKKIESFGSPEG
IVSKRIVITDCGQIQNDSADILEA
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcgcagcagggcggaagtggaccgctatgtttcctccttacaggcctcggcc
ccttcgccgaaggagaaatccatgaaaggattcttttttgctaagctgtattatgaagca
aaggaatatgaacttgctaaaaggtatatatctatatatctcagtgtccaagaaagagat
cccaaagcgcacaaattcttgggacaactgtatgaagctgaaaataatattgaaaaagca
gtgggctgttataaacgttcagtggaattgaatccaatacagaaagaccttgtattgaag
attgcggaactgttatgtagcaatgatattactgatggaagagcaaaatattgggttgag
agagcagccaaactttttcctggaagtccttcaattttccggttgaaggaaagcctcttg
gattgtagaagtgaaaatggatggaaccaactttttgacttaattcagacagaattgtat
actcgaccagatgatgtatatgttaatatcagattagtaaaattatacctgtcaaataac
aggcttggcgatgctgtggcacattgccaggaagcagagaagaaaatatccttacggtca
aatttggaatggtgttcctgtgttgttcaaacatttaaggaatatctggaatctgtagag
gactctgaatcagataaaattagttggagaaagattcaaagggaccttttactggcatac
tgtaatctggtagtaatgaaactttctgccagagatgtagaagaaagtagagcatcactt
gaaagctttgatcatacacttcatttggtaaaatcacatgcagatggaagtgatgagctt
tctgtcactttcctggaaatgagaggacatttctatatgcatgctggaactctgctgctg
aaaatggcccagcagagtgagatgcaatggagggctgtttctgaactggcagctttatgt
taccttcatgcttttcaggttccaagaccaaagtcaaaactaataaaaggagatcatgct
gaacaagaaaagttggagatgttagcctgtgaccgacagagccagtctggctttatgctc
ttaaacctaagctatggaaaacaggattttttaacagaggttgttgagtcatttgcaaat
gagagcggacactctgctttattttatgctctgtttggggatgtttcttctaaagagaac
tcatttcttggcacagacgatataaaaaatgttggtatacaggctccagaatgcatagaa
ctagctagatatgatactggtgccattagagcacatgatggtagtctccagcacatcacg
tggcttggtctgcagtggaattctgcacaagctgtgccagccattcgtaaatggctaaag
cagcttttccatttgccccaggagacatcaagacttgaaaccaatgctcctgaatctatc
tgtatgctggatcttgaagtgtttctacttggggtaatatttaccagtaacttgcaatta
caagagaagtttcatactaagtacactgtacatcagcctcgattcctgccactgccaata
tgcaagcaactttgtactgaaagacaaagagcctggtgggattcagtttatacgctcatt
cataagcaagcggtacctggaacagcagcaaaagtaagacttctagttcaacatgaattg
aacaccctcagggccttaggaaaacatggtcttcaaccatctcttatagtgcactgggca
aaaagtctccttaaaacaggctgcagtcttaattctttctatgatcagagagaatacatt
gggcgaagtgtttattattggaagaaagttttgccaatgcttgagacaataaagaaaaag
aggagtatttctgaacctattgacccattgttcaaacattttcatagtgaagatattcag
ctttctcaggttgaagaatatcaagaagaagctcgtatagcatttgctattttggatgct
gttgatggcaaaacagatgatgctacgcatgcatttgaagctattaataatattgttgca
tattggaatcttgctttgattttccagaggaaagctgaagagatagaaaacgatggtttg
tcaccagaagaacaagaagaaggcaggaaatatttgaaaaaatgtagggattatctccta
aagataattgatgagagctgcatggattcatctgtcattgaaaagttacctgtatccatc
aggacagttaaggagatgctggaaggcataatgcaggatcttggagataatggagaagaa
aggagtcttgtgaataatttgagccaccctttggaatcagaagtgaaacattctacgcca
tcacccacagcattttcactatctccaagtaaaagttacaagttctctcccaaaactccc
cctcgctgggtcgaggatcagaagtctctgctgcagatgatctgtcagcaagtggagtcc
attaagcatgaaatgcaagaaatgaaacttaacaactctaacacaaatctgtctaatcgg
tggccagctgaaaactattcaacagagacaatgccagatgggtaccagggagcacaaaac
tttcatggagcaccattaactgttgccactacaggaccctcagtctactacaacccatca
ccagtatataattctcagtatcttctacgaacagcagcaaccaatgttactcccacaaag
gctcctgtctatgccatgaatagacttacgccccagcaacacctatatacctatcaacag
cccatgcatactcctccactgccgaacacatctgcttgtatgttttcacaagatatgtat
ggtgcaccactgcgttttgattcttctgcaactggaattttgtctccacgaggcaatgaa
gactactacaattacagtgtgccaccaacaagcacgaatccccccctccctgaaccaggc
tactttacaaaaccttccacagcacctcctgtttccagatcggctgaaacaaaggtgata
gaatttgggaggccaaactttggacagcctcctatatcagcagatggagcaaaaccttca
ttaataatttctgctcagccaaccacttttaaatttaattctaatttcaaatctaatgat
ggcgatttcaccttttcatcgcctcaagttgtaggacagccccataatgcaaactatagc
aacagtgacagcctattgggtcttttgacatcagataaacctatcaaagaggatcgctac
tcaggacagaaaccacttgctgaatatgtcacaggacaacgcaacatattcagttttggt
ggtaaaaattcttctggtgtttcattaacagataaaatgggccatactcaatccaagcct
tctggatttggcaaggatgatatgttcggttgtcaagaactgggcaagcctgtatttggg
atgccaaacttagatggagcaaacagaagtcatgaaacagatggcggcagtgtccacggt
ggggaggaagaagatgatggtcctcattttgaccctgttgtccctctgcctgataagatt
gaagtaaaaacaggtgaagaagatgaagaagagatcttctgtaacagagcaaaacttttc
cgttttgacagtgaatgccgagaatggaaagaaagaggtgttggtaatgtcaaaattcta
aggcataaaataacaggcaaaattcgactacttatgagacgagaacaagtgttgaaaatt
tgcgcaaatcattatataaatcctgatatgactttgaaaccaaatgctgagtcagacaaa
tcttttgtatggcatgctttggactatgcagatgaattgccaaaacctgagcaacttgcc
attagatttaaaactccggaagaagcaatccttttcaagcacaaatttcaggaagcacaa
aatagtttgaaaggtgctggatcggaccttggccgtcaagtggttccgaacattaggcca
tccagagaaactgcttcacaggacaggaaagagcctggtaaagctgaaactggattcctg
aattccgggtttcatttcaagaatggggggacccccttcagtggtagctctcaggttcct
agtcctgacgttaacagcacagcaaaaaataccaatgtcaggagcactttctcaattaca
tcaggtggaactacaccagcatccttttcatttgggaaagatgtttctggaacacacaca
acatatggctttggagagcagttcatgttgaagaaagatcagtgggaatgtagcacgtgt
ttagttaggaataaaataacctcacaaaagtgtatagcatgccagtctccaagcccattt
aattgggaagctcaggctgtacttccagaagaatcatccgcatctttaaagcctggaagt
gagggagcacagaatacatttgggcccctttctactaccatggagaaccagtgggaatgc
aagaactgttctcgtaagaatgaagcaagtgcttctcattgtactagctgcaagaatccc
agtgggatcagcaatccaacgtttggttctcaaaccccatttaaatttggccaaacggat
acttcaaaggatacttcaaaagttccacagagtggctttggggctgcttttatgaagaag
gaagggcagtgggactgtggtatatgtttagtacgaaatgaaggatctttgccagcttgt
gcagcttgtcaggctccaaatccctcttgtgatgcttcccctctgtctgctaatggctca
ccggctgcttttggcttcaagagcaagttatctgaatctgctggaaaaccacaagagacg
ggttttaaatgtgaagtatcaggcaagacttttaaatttggcattcccacagagccagaa
aagtctccctttccattccaggttcctgctactactgagccaaaggctgtaataaaggga
gggtttaatttttcaatgcctatccccccaggagaatttaaatttggtattcaggactct
agtgaagcggttgcaaaatctgaacaaaatgaagaagttaatgtctttaaaagtatcgat
gataaagagaagaaaagcgagaaggagactgaaacacagttgcccagcgcatgtaaccaa
ccaagcagtgatttggtttttggtcaccagagcgatactttcacttttgctgatcttgcc
aagtcaggtgaaggatttaagtttggtcaaaaagatcctaattttaagggcttcacaggt
gcaggtgaaaaactcttttcttctcagatttctaaaatgtctcccaagctaaatacttct
gctgatcttgaaaaagatgatgatgaatataaaacggaagatagtgacgatattcatttt
gatcctgttgttcagatgcctgaaaaagtggagcttgtgacaggagaagaggatgagaag
gtactgtattcacaaagagtgaaactgttcaggtttgatgcagaaatcaagcagtggaaa
gagcgtggcgtgggcaacctgaaaatccttaagaatgaagttaatggtaaacttcgggtg
ctgatgaggcgtgaacaagtgttgaaggtttgtgcaaatcactggatcacaactactatg
aatctgaaacctctctctggctcagacaaagcatggatgtggctggctaatgacttctct
gatggggatgcaaagctggagcaattggcagctaaattcaagtcttcagaacaggccgaa
gaattcagactgaaatttgaagagtgtcagagactgttgttggatataccacttcaaact
ccacacaagcttgtagatactggaaagacagctgagctgatacaaaaagcagaagaaatg
aaaagtgggttgaaagatctcaaaaccttccttacagatgataaaactaaactcatagat
gaagagaaaactttagtgtcttcctctaacagttctgatctagttataaagccacatgct
gaaagtactggacctacattagaatgggacaactatgatttgcgtggggaagctctggat
gacagcactgacagttcagtgtatccaatgcctcgggcaagtagccctgtgaggaaaaat
ctatttagatttggagagtctgccacaggatttaacttcagtttcaaatctgcattaagc
ccttcaaaatctccttccaaacagaatcagagtagggtttccgttggtacagatgaagag
tctgatgtcacccaagaagatgaaagagatggtccatattttgagccagttgtgccttta
cctgaccttgtagaagtaacaagtggtgaagagaatgagcaagtagtctttagtcaccga
gctaaactatatagatacgataaagatgctaaccagtggaaagagaggggcattggggat
ataaagattttacagaactatgatactaagcaggtccgtgtagttatgagaagggatcag
gtgttaaagctttgtgccaaccatagaataacccccaatatgaacatccagcaaatgaaa
ggtgcagagagagcctgggtgtggagcgcgtgtgactttgccgaaggggaaagaaagatg
gagctcttggctgtgcgatttaaacttcaggatgttgctgattcatttaagagaattttt
gaggaagcaaaacatgctcaagaaaaggacatattaatcacaccactctcttcccgtact
aacaccccaaaagaatctccctgtggaaagattgctgttgcagtgttggaagaaaccacg
agggagagaacggatttaaaggaggccgaagaaacagttgttgaagttgcagagactcca
gtagttgagagtacagctgagatgccaacgaaagctgttgtttcccctcctaaatttgta
tttggctctgaatctgttaaaactatatttaatgacaaaaaatcaaaaccttttacgttt
ggaaacacatcagcaacaggctcactctttggtttcagttttaatgctcctcccaagagc
caaagtgatgattcagtgtgtcagaccatgaatgctaaaaaatcagatagctcacaagat
gctatggcttgcagacatgcggaacaccaagaaaacagtagtgctgctaattggaagccc
tcagaaggccaaggagaaaccccagcggctacctcaaaagcagaagcggtttctaacttt
tcattcaaaacactagaaaaagctgagattaagaaggaaccaaatacaatcccatcagat
gatgtattgattgtgtatgagttaacaccaaccgctgatcaaagagctcttgcagaatct
cttaaactacccccaacgttcttctgctataagaataaacctgggtatctgagtgaagat
gaagacgatgaagactatgaaacagctgtcagaaggcttaatggaaaattgtatttagaa
gaacctaaagagaactcagaaataatgaatacaagtgctgtagaacattctgatccagag
actagtaatgaagttattgttgtttgggaaaagaaaccaactcctaaggaaaaagctaaa
gcagaagctctaaagtttcctccaacttttctctgtggtattaacagtgacactgatgaa
gacaatgacaacttagattttgagacagaacttagaaaaactcaagaaacaaaagaatct
caggcagaagaaataattacttcaactgacgatgtgtgctccggtgaggaaggaggacca
gatgtatcctgcagtattactgaagtatcagattctacaaccaaccttagatgtactaca
tgggatacattaagaacagatggcaactctactcctgaaactgaacaaagctttaagaat
ttattaggaacagatgacaaacctgttgatttatcaaataagaaggaatgtgattccagt
tctgaagcctctgtaaatcaagaaaataatccgttttcctttgctcttcataatgtatcg
agcttgtcatttgctgatctggcttcaaacaattctggggattttgcttttggttccaaa
gcagacaaaaactttaagtgggcaaatacaggagcagctgtatttggaatacaagcagcc
actaaaggggattgtgatgatgatgcaagcgatgaagatgtggtacacagtgacgatatt
cattttgaaccaatagtctcactgccagaggttgaagtaaaatctggagaagaagatgaa
gaaattatcttcaaagaaagggccaaactatacagatgggacagagaagtcaatcagtgg
aaagaacgtggtattggagaaataaagattctcttccatatgcaaaagaaatgttaccga
attttaatgagaagggatcaagttctcaaagtctgtgcaaaccatataatcacaaaagca
atagacttaaaacccttgaattcttcaaacaatgctatggtttggactgcaacagattat
gctgatggtgaagctaaggtagaacagcttgcagttagatttaaaacccaagaactggct
gataccttcaagaagaaaattgaagagtgtcaactgattttgtcggaagaacagaaggga
cacgtatcttttgcagaaaaattttcaaaggaatctaaccctgtagtatatcttgacatt
tctgctgatgatgaacctctagggcatgtaagaatagaattgctttccaatgttgttcct
cgaaccgctgaaaacttcagggcattgtgcacaggagaaaaaggatttggatatcgaaac
tctagatttcacagaataattccagattttgtctgtcagggaggtgacatcactaagcat
gatgggacaggggggcagtccatttatggaaattcatttgaagatgaaaattttgaaata
aaacacactggtcctggcctattgtcaatggcaaattgtggcagaaataccaacaattct
caattctttattactctcaaaaaagcagaacagttggactttaaacatgttgtctttggg
tttgtaaaggatggtatggatatagtgaaaaaaatagaatcttttggctctcccgaagga
atagtgtcaaaaagaattgtgattacagattgtgggcaaatacaaaatgattctgctgac
atattggaagcttaa
DBGET
integrated database retrieval system
