Pseudonaja textilis (eastern brown snake): 113440945
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Entry
113440945 CDS
T09005
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04518
Integrin signaling
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113440945 (COL6A3)
04518 Integrin signaling
113440945 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113440945 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113440945 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptex04147
]
113440945 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113440945 (COL6A3)
Exosome [BR:
ptex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113440945 (COL6A3)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113440945 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
113440945 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
vWA_SIBA-E
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
113440945
NCBI-ProteinID:
XP_026563430
LinkDB
All DBs
Position
Unknown
AA seq
2115 aa
AA seq
DB search
MISPLTTYVSGDVEEVPSTSTENKIDILFLIDGSSNVAGQFPTIREFLLQIISDLNVGPD
TIRVAVAQFSDNVNVEFNFDTPSKIEILQKVRKMRMKGGKLLNIGAALDYAVKNIFVRHA
GSRIEEGVPQFLVLLVAGTSDDTVDESADTVIRTGVITFVIQTKTSDPAELERIVYAPQF
ILKVDTLSQIGDIQHEIVNLLKTIELKPQATKKDVVFLIDGSQFAISEFPSIREFIERLI
NNMNVGSDATRVAVIQFSDSPKVEFLLNAHSTKEEVLAAVRRLSPKGGRQVNLGSALEYV
SKNIFTRPSGSRIEEGAPQFLILLYSHQPHDDTENPVHLIKQIGVAPLPIGKNVDPEEMT
KIALSSDYVFQVSSYQDLPTLEQKMLTPLTTLTTQQIRKIIADTSRPTDIDSEAMDIVFL
VDSSDDVRPDGLAHIRDFIYRIVQKLDIQPSKVRIAVVQFSNEVFPEFDLKTYRTKESVL
QSIRRLRHKGGSPLNVGKALDHVMKTLFIRSAGSRREDGIPQHLILLLGGRSQDDISRPT
ILVQNSGIRTLGIGTRQVDSAELQRITNNPQTAIIVRDFTELPAIEKRVRAAIDTVQPPT
EQPTEVISVDKKQGDIVFLLDSSINFGRDNFHHVVEFIHDLIDAIYDEGDSIQVGLVQYN
SDVSDEFFLKDFSDKERILEAVKRITYKGGRIANTGAGVKHIQAKHFVKEAGSRKDQNVP
QIAVIVTAGKSEDDGEAAVLGLSQSGVRVFAVGVRNIDMNEITKLSSDSTTAFRAPTPQV
LSELNEAVLVTLNDVMREQLCRGVVEVSRDCNLDVILGFDVSNTIQGQNIFREQTMLEST
VEDILNRISQMPKISCTPNQAPTVRVALLAQTPSGVVEAFDFSEYQPELFEKFQALRTGG
PYVLTADTLKSYQNKFKTAPTGSTKVVIHLTDGIEGAMGPLAAASANLKKEGVKALILIG
LDQVSNFKEAMKLEFGRGFTYNRPLQVNQMDLDFEVTEQLDNIAERSCCEVPCKCSGERG
DNGFPGIVGQKGIPGENGYRGYPGDEGGLGERGPPGINGTQGFQGCPGERGMKGGRGFPG
EKGEVGENGLDGIDGEEGERGFPGVPGERGSPGRQGGRGSKGEIGDSGDHGLRGDPGTFG
TDSTDRGPKGEKGELGPAGEVGRTGPRGDAGGAGRDGALGRRGPPGIKGNKGAPGSPGFN
GEQGTKGPQGPPGTNGIPGIQGDSGLPGQRGSSGPGGTVGERGRSGPLGKKGEAGEPGLK
GPIGPPGPRGEMGDDGRDGAGNEGLRGRTGQPGFPGYPGLRGVPGDHGDDGKSGPKGSSG
ERGHSGDPGQSGQKGESGYPGPPGLMGNKGESRDHCTLIRNIKDKCPCCYGPKECPVYPT
ELAFALDTAAGGSADTFNRMKDTVKSIVNNITITESNCPRGARVALVTYNNEVTTEIRFA
DSRKKKDLIKQIEDLQFVQTSKQRSLETAMAFVARNTFKRARSGFLMRKVAVFFTNGPTR
ASPELNEAVLRLYNAGVVPVFLTNREDRVLTNALQINNTGGQAFAFTGGAGQLAATLRKV
FTCHICLDVCDPDPSCGIQRAGFGRDRRAVPTDVDIDIAFILDSSESTTQMQFKEIKSYI
SYIVNQLEISSDPKVSQHHARVAIIQHAPFEFQSNTSISPVKVELSLTDYGPRDKLTDFI
QNQMSQLYGTRAVATAVDYTMRHIFESAPNPRDHKVIVLMMTGGIEKEELEHLQKVIVEA
KCKGYFVVIIGIGRNINIPSIYSLASEPNDVFFKYADMASELHEEPLLRFGSLLPSFINS
ENTFYLSPDIRKKCDLFQGDQPIKKFGQKQLNIPNNVTVTPVVTEKLEVIKNNGEVKITD
ITENSAKLHWMIPEPQKVYTYHITVTSAHDHSLVVKLNLTSNERVIGGLQSGEKYDVTIT
GYHNAQAKATYRGTFNTKSMPGAKIPSAGTAAVAAATNVMVNTEPLEVPEKDPCLLDLDM
GTQCKEYQVKWFFDYKNEICTQVWYGGCGGNANRFETEADCISRCVKPSDEKDMQLPVLE
KSHLSVTDICQLKKKDGPCRKFVLKWYFDPKTASCARFWYGGCDGNENRFDTQKDCENVC
LSAHIKSGVVTMIGT
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgattagtccgctaacaacatatgttagtggagatgtggaagaagttccgagcacatca
acagaaaacaagattgatattttatttttgattgatggctcatcgaacgtggctggccag
tttcctactattcgagagtttctgctccaaattatttctgatctgaatgtggggccagat
actatacgagtagctgtagcacaatttagtgacaatgtaaacgtggagttcaactttgac
accccatccaagatagaaatccttcagaaagtgagaaagatgaggatgaaaggaggaaag
ctactgaacattggagctgcactagattatgctgtaaaaaacatctttgtaagacatgct
gggagcaggattgaagaaggcgtgccacaattcctggttcttcttgtggctgggacatca
gatgacactgtggatgaaagtgctgataccgtgatacgaactggtgtgattacttttgtt
atccaaaccaagacctctgatccagctgaattagaaaggatagtttatgcccctcagttc
attctaaaggttgataccctttctcaaattggagacatacaacacgaaatagtcaatcta
ctgaaaaccatagaacttaaacctcaagctacaaagaaagacgttgttttccttattgat
ggctctcagtttgcaatttctgagttcccttcaattcgtgaatttatcgaacggctcata
aacaacatgaatgtgggttcagatgctactcgagtagctgtaattcaattcagtgatagt
cccaaagttgaatttttgctgaatgcacattctactaaggaggaggtgctagctgcagtg
agaagactaagtcccaaaggtgggaggcaagtgaatcttggttctgccttagaatatgtg
tcaaagaatatctttacaaggccttctgggagccgcatagaggaaggagcacctcagttt
ttaatccttctttactctcaccaacctcatgatgatacagagaacccggtacacctgatc
aaacagattggtgtggctccgcttcctattggaaagaatgtggatcctgaggaaatgacc
aaaatagcacttagttctgattatgtgtttcaagtgtcaagttaccaagatctacctact
ttggaacagaaaatgttaacccctcttacaacattaactacccaacagatacgaaaaatc
attgctgatacaagtcgccctacagacattgacagtgaagccatggacatcgtcttcctt
gttgatagctctgatgatgtcagaccagatggacttgctcatattcgtgatttcatttac
cggattgtccagaagctagatatccaaccaagcaaagtgagaattgctgttgtccagttt
agcaatgaagtgtttcctgagttcgacttaaaaacctaccggaccaaagagagtgtacta
caaagcatacggcgcttaaggcacaaaggtggttctcccctgaatgttgggaaagctctg
gaccatgtcatgaagacactcttcatcagatcggcaggaagtaggcgagaagatggaatc
ccccagcatttaatcctcttgcttggagggagatcccaggatgatatcagcaggcctact
attctggtgcagaactctgggattcgtactctgggaattggaacaagacaagtagacagt
gcggaattgcaaaggatcaccaacaatccccaaactgcaattattgtgagagatttcact
gagctcccagcaatagaaaaacgggtccgtgcagcaattgatacagtacaaccaccaact
gaacaacctactgaagttatcagtgttgataaaaaacaaggtgatattgtcttcttgctg
gatagctctatcaattttgggagagacaatttccaccatgttgttgaatttatacatgac
ttaatcgatgctatttatgatgaaggcgattccattcaagttggtttagtgcaatacaac
tctgatgtgagtgatgaattctttctgaaggatttctctgacaaggaacgtatcttagaa
gcagtgaaaaggataacctacaaaggaggcagaattgccaacacaggagcaggtgtcaag
catatccaagcaaaacattttgtgaaggaggctggcagcaggaaagaccagaatgtccct
cagattgctgtcattgtaacagcaggcaagtcagaagatgatggggaggcagcagtctta
gggctgtcccagtcgggtgtcagggtcttcgcagttggtgtgagaaacattgatatgaat
gaaattacgaagctctccagtgacagcacaacagcctttagggctccaactccccaggtc
ctctcagagctcaatgaggctgttctggtgaccctgaatgatgtcatgagagaacagtta
tgtcgtggtgtggtggaagtctccagagattgcaatctggatgttatacttggatttgat
gtttcaaatactatacaagggcaaaacatattccgtgaacaaacaatgctggaatcaaca
gttgaagatattctgaacaggatcagtcaaatgccgaaaatcagctgcactcccaaccaa
gcacccacagtgcgtgtagcacttctggcacagactccctctggagttgtagaagccttt
gatttctcagagtatcagccagagttgtttgaaaagttccaagccttgcgaactggtgga
ccatatgtactcacagcagacaccctcaagtcttaccagaataaatttaaaacagctcct
actggaagtacaaaggtggtgatccatctaactgatggtattgagggtgctatgggacca
ctggcagctgcatcagctaatctaaagaaagaaggtgtcaaggctcttattcttattggg
ttggaccaagtatctaattttaaagaagcaatgaaactggaatttggacgtggctttact
tacaataggcctctccaagtgaatcagatggatttagattttgaagtgacagaacaattg
gacaacattgcagaaagatcatgttgtgaagtcccatgcaaatgttctggagaacgggga
gacaatggatttccaggcatagttggacaaaagggaattccaggggaaaatggctatcga
ggctatccaggagatgaaggtggactgggtgaacgtggacctcccgggataaatggaact
caaggtttccaaggctgccctggtgaaaggggaatgaaggggggccgtggattcccagga
gaaaagggtgaagtaggggaaaacgggcttgatggaatagatggagaagagggagagaga
ggctttccaggtgttcctggggagagggggagccctggtagacagggtggccgaggaagc
aaaggagaaataggagactcaggtgaccatggacttcgaggcgatccgggtacttttgga
accgatagcactgacagaggacccaaaggcgaaaagggagaacttggaccagcgggagaa
gttggaagaactggaccacgaggtgacgcaggaggagctggaagagatggagcacttggc
agaagaggaccacctgggattaaaggaaataaaggtgcccctggctcaccaggatttaat
ggggaacaaggaactaaaggtccccagggaccacctggcacaaatggaatccctggcatt
caaggagactccggcctccctggtcaaaggggttctagtggtccaggtggaactgttggg
gagcgtggtaggtctggtcctcttggtaaaaagggtgaagctggtgagcctggtcttaag
gggcccattggtcctcctggtccccgaggagaaatgggagatgatggacgagatggagct
ggcaacgaaggactgagaggcagaacgggacaacccggtttcccaggatacccaggatta
cggggtgtacctggagatcatggtgatgatggtaaatctggccccaaaggaagcagcggt
gaacggggacattcaggggaccctggccaaagtggacagaaaggagagagtggctatcca
ggaccacctggacttatgggtaacaaaggagagtctagagatcactgcacgctgatacgc
aacatcaaagataaatgcccttgctgttatggtccaaaagaatgtcctgtttatccaact
gaattggcctttgctcttgatactgccgctggtggaagtgcagacactttcaatagaatg
aaggacacagtaaagtcaattgttaacaatatcacaattacagaaagcaactgccccaga
ggtgcccgggtagcactggttacatacaacaatgaagttaccactgagatacgttttgct
gacagcagaaagaagaaggatttgatcaaacaaattgaggacctccaatttgttcagacc
tccaaacaacgtagcttagaaacagccatggcatttgtggccaggaatactttcaagcgt
gcacgtagcggcttccttatgaggaaagttgctgtgttcttcaccaatgggccaacaaga
gcatctccagagttgaatgaagcagtactaagactctacaatgctggagttgtacctgta
ttccttacaaacagagaagacagggtccttaccaacgcattacagataaataacactggt
ggacaagcttttgcatttactggtggcgccggtcaattggctgcaactcttagaaaagtg
ttcacatgccatatttgtctagatgtatgtgatcctgatcccagctgtggtatccagagg
gctggctttggcagagacagacgggcagttcctacagatgttgacattgatatagcattc
atcctggatagctctgagagtaccactcaaatgcagttcaaagaaattaagagctacatt
tcatatattgtaaatcaactggaaattagttctgatcccaaggtatcacaacatcatgct
agggttgccattatccaacatgctccttttgaatttcaatcaaacacaagcatatctcct
gtcaaagttgaattgtcactcacagattatggcccaagggacaaattaacagatttcatt
cagaaccaaatgtcacaattgtatggaacacgggctgtggcgactgcagtagactataca
atgaggcatatttttgagagtgcaccaaatcccagagatcacaaagtcattgttttgatg
atgacaggaggcattgaaaaggaagaacttgaacaccttcagaaagttattgtagaagct
aaatgtaagggatattttgttgtcattatcggcattggtaggaatattaatattccaagt
atctacagcttggcaagtgagcctaatgatgtcttcttcaaatatgctgatatggcgtca
gaacttcatgaagagccattgctacgttttggaagccttttaccatccttcatcaatagt
gaaaataccttttacttatctccagatatcagaaaaaaatgtgatttgttccagggtgac
cagccaatcaaaaaatttggccaaaaacaactaaatattccaaataatgttactgtcaca
cctgttgtaacagaaaaattggaagtgattaaaaataatggagaagtcaagataactgat
ataactgaaaacagtgctaagctgcattggatgattcctgagcctcagaaagtctatacc
tatcacatcacagtcacctcagcacatgaccactccttggttgtgaagcttaatttaact
agcaatgaaagagtcattggaggtcttcagagtggagaaaagtatgatgttactatcaca
ggctaccataatgcccaggccaaagctacttatagaggaacatttaatacaaagagcatg
ccaggagccaagatcccttcagcaggaacagcagcagtagcagcagcaaccaatgtaatg
gtgaacactgaacctttggaagtccctgaaaaagatccttgcttactggaccttgacatg
ggcacgcagtgcaaggagtatcaggttaagtggttctttgactacaaaaacgagatctgc
acccaggtttggtatggtgggtgtggcggtaatgccaatagatttgagacagaagctgac
tgcattagcagatgtgtgaagccatcagatgagaaagacatgcagcttcctgttcttgag
aaaagtcatttgtcagtcacagatatctgtcagttgaagaaaaaagatggtccttgcagg
aaatttgttctaaaatggtattttgatccaaagactgcaagttgtgctagattctggtat
ggtggctgtgatggaaatgaaaatagatttgacacacaaaaagactgtgaaaatgtctgt
ctttcagctcacatcaagtctggtgttgtgacaatgattggaacttaa
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integrated database retrieval system
