Pseudonaja textilis (eastern brown snake): 113440983
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Entry
113440983 CDS
T09005
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04382
Cornified envelope formation
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113440983 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113440983 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113440983 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113440983 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptex04147
]
113440983 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113440983 (COL4A2)
Exosome [BR:
ptex04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113440983 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113440983 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113440983
NCBI-ProteinID:
XP_026563507
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MKSTPHFSLGCWTRQDMQIMLLVGLTVLLPACVQAGGKSYTGPCAGRDCSGGCECVPEKG
ARGQPGLLGQQGPPGPSGVMGIPGLSGHKGDKGERGRPGITGPKGEVGQRGVTGFPGADG
IPGHPGQGGSRGKPGHDGCNGTKGDPGPQGIQGPAGTPGFFGIQGPKGQKGEPFALPEEL
AIQFRGNPGDSGVVGFIGPQGAPGPLGEPGLEGDSGLPGLPGPPGPPGPIGNRGLGFHGK
KGEKGEIGPPGPPGCTSTGEFVGSIDEILIEHKGMKGNKGMRGEPGFPGFPAQEAEKGEE
GITGFPGQRGLPGINGLKGAEGDVGTPGNYGFQGNPGQKGMKGDPGDKGIRGPPGHAQHP
TLIKGVPGDRGLDGIPGPEGERGMKGSPGPPGAEGSFDGVSERRGFPGEMGPKGFIGEPG
FPANRPGPPGLDGEPGTPGFPGPPGPPGSPGYSVGLKGYPGVPGPAGQQGYPGPQGQQGL
KGDTGDCKCVEQIEGRRGPAGQPGPPGFPGPIGHVGRKGELGDQGYHGLPGFAGGKGLPG
EPGPSGPKGIKGDSQYVTIKGAKGEPGTPGIPGSPGEDGSPGRNGIDGLPGLPGLRGDGI
RGEQGDPGSAGQPGPKGFPGETGLPGVSLPGPKGYRGPTGDLGTFGNPGFQGPPGPPGAP
ARTECGQTQDHFLRDNRTESIHSGTSCVMAPKGAPGYPGPPGLPGAKGTKGIPGEFGLHG
PQGPQGLQGDQGRGGAGSPGFTGPRGSRGAPGVPGEKGLRGNPGLPGLLGRLGEKGLTGD
VLGAPPGFPGDNGPPGFPGTKGLQGDQGLPGIKGSDGFPGPSGSKGNPGFRGPTGLTGIR
GPPATFGFPGLPGQQGSLGRKGPQGFVGSPGVRGEPGEPGKVGPVGMKGLPGDKGGQGII
GTKGKAGKTGLPGMAGMPGFPGLKGSKGSRGIEGFNGAMGFKGWPGQKGIYGEKGLPGKQ
GAKGPSGEFGLKGDRGIRGLRGAPPKIMPNIILEVKGEKGSRGTFGVKGNIGLQGSKGMM
GSPGPTGLSGFPGFPGFEKGHKGDAGIKGIRGVPGYIGVPGPRGISGFPGTPGRRGEKGF
PGVPGLIGEAGQLGEIGDRGDTMNLPGSKGSKGIPGPAGPAGLKGDKGKKGDAGDQGYRG
VEGMEGPQGSQGLIGQGGFPGQFGEQGAPGDPGIPGASGDRGNVGNIGLPGRKGVHGSKG
LPGLDGLPGSKGLPGSPGPDGYGTSGFIGALGEKGPAGDPSPIEGSRGPPGQKGQRGDPG
WRGSAGAPGPDGRPGFPGVSNISGIPGDVGSPGFDGVPGYPGVPGIPGTAGSLAIKGEEG
SIGPTGEDGLKGIKGAQGPDGRPGISGLPGAKGYKGEQGVMGFIGPTGISGDFGPIGPKG
DRGPTGFQGPPGSPGLPPLLPKLVAERGAPGAPGKIGPPGPAGEMGPHGPPGDPGFRGPI
GKPGAPGRGGIAATPGFRGDQGGQGLHGLAGFEGAAGAPGTPGIPGMPGRSVNIGYLLVK
HSQSIQEPMCPEGMRQLWSGYSLLYFEGQDKAHNQDLGLAGSCLARFSTMPFLYCNPGDV
CYYASRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPALAIAIHSQDVTIPHCPE
GWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSF
WLTTIDHHFQHSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtactccacacttcagtttaggatgctggactaggcaggatatgcaaattatg
ctcctggtgggattgactgtgcttcttcctgcctgtgtacaagctggtggaaagtcctac
actggaccatgtgcagggagagactgcagtggaggctgtgaatgtgttccagaaaaagga
gctcgtggccagccaggattgcttggacaacaaggaccccccggaccatcgggagtgatg
ggcataccgggactttcagggcacaaaggggacaaaggtgaacgaggtagacctggcatt
actggacccaaaggagaagtgggacaaagaggagtcacagggtttcccggtgcagatgga
attcctggtcatccaggtcagggaggatcaagaggaaaaccaggccatgatggttgcaat
gggaccaagggagatccaggtccacagggaattcagggacctgccgggactcctggtttt
tttggaatccagggacccaaaggtcagaagggggagccttttgcactgcctgaagaatta
gctatacagttcaggggaaaccctggtgactcaggcgtggttggcttcattggacctcaa
ggtgctcctggaccgttgggtgaacctggtctggaaggagactcaggtcttcctggactt
ccaggacccccaggacctccagggcccattggcaatagaggtcttggctttcatggaaag
aagggtgaaaagggtgaaattggacctcctggtccacctgggtgtacatcaacaggagaa
ttcgttggttcaatagatgaaattctaattgaacacaagggaatgaaaggaaacaaagga
atgaggggagaacctggatttccaggttttccagcacaagaagcagaaaagggagaagaa
ggaataactggctttccaggacaaagaggtttgccaggaatcaatggcctaaaaggagct
gaaggggatgtgggtaccccaggaaattatggattccagggcaatcctggccagaaaggg
atgaagggagaccctggagataaaggaattcgagggccaccaggtcacgcacaacatccc
acacttataaaaggtgtacctggtgaccggggattggatggcatcccaggccccgaggga
gagagaggaatgaaaggcagtcctggtccacctggtgcagaaggatcattcgatggtgtt
tctgagagaagaggctttcctggagaaatgggccccaaaggttttattggtgaacctggt
ttcccagctaatcgtcctggtcctcccggtttagatggcgaacctggaacacctggcttt
cctggcccccctggccccccaggaagtccaggttattccgttgggctgaagggttatcca
ggagttccaggtcctgcaggccagcaaggttatccaggcccacaaggacaacaaggactg
aaaggtgatacaggagattgcaaatgtgttgaacagatcgaaggaagaaggggtcctgca
ggacaacctggtcctccaggattcccaggtccaataggacatgttgggagaaaaggggaa
ttaggagatcaaggctaccatggacttccaggctttgctggtggaaagggattacctggt
gaacctggaccttctggaccaaaggggataaagggggattcccagtatgttaccataaaa
ggtgccaaaggagagccaggaactccaggaattcctggaagtccaggagaagatggttca
ccaggcaggaatggcatagatggtttaccagggcttcctggtcttcggggtgatggcata
agaggagaacaaggggatcctggtagtgcaggccagccaggcccaaaaggttttcctggt
gaaactggtctgcctggtgtgagtttgcccggtccaaagggatatcgtggtcctacaggt
gaccttggcacgtttggaaaccctggctttcaaggccctcctggccctccaggcgctcct
gctcggacagaatgtgggcaaacacaggaccactttcttagagataatagaacagaatca
attcattcagggaccagttgtgttatggccccaaaaggagctccggggtacccaggacca
cctggattaccaggtgcaaagggtacaaaagggattcctggtgaatttggtttgcatgga
cctcaaggacctcaaggacttcaaggggatcaaggtcgtggaggtgcaggttcaccagga
ttcactggacccagaggaagcagaggtgccccaggagtgcctggggaaaagggacttcga
ggaaatcctggtttgccaggtttgctaggccgccttggggaaaaggggcttacaggtgat
gttctaggagcaccaccaggctttcctggagacaatgggccacctggattcccaggaaca
aaaggcttacaaggagaccaaggcttaccaggaattaaaggaagtgatggcttccctggt
ccctctggatccaaagggaatcctggttttcgtgggcccactggcctgaccggtatccga
ggaccaccagcaacatttggattccccggactcccaggccagcaagggtctctgggtagg
aaaggcccacaaggatttgttggatcccctggtgtcagaggagaaccaggagagccaggg
aaagttggtcctgtagggatgaaaggtctgccaggggacaaaggtggacagggcattatt
ggaactaaaggaaaggctgggaaaacgggtctccctggaatggctggaatgcctggtttc
ccaggtcttaaaggttctaaaggatctcgtggcattgaaggtttcaatggtgctatgggg
ttcaaaggatggccaggccagaagggaatctatggagagaaaggcctccctgggaagcaa
ggtgctaaagggccatctggggaattcggattaaaaggtgaccgtggaatacgtggtcta
cgaggagcacctcctaaaatcatgccaaacataatactagaagtgaaaggtgaaaaggga
agtagaggaacatttggtgtcaaagggaacatcggtctacaaggaagtaaaggaatgatg
ggatcacctggtccgacaggattgtcaggcttccctggatttcctggtttcgaaaaaggt
cataaaggcgatgccggaattaaaggaataagaggtgttccaggatatattggtgtccca
ggtcctcgaggtatttctggtttccctggaaccccaggacggaggggagaaaaaggtttt
ccgggagttccaggtctgattggtgaagctggccaactgggtgaaattggtgacagagga
gacactatgaatttgccaggaagtaaaggttctaaaggaattcctggaccagctggacca
gcagggttgaaaggcgacaaaggaaagaagggtgatgctggggatcaaggatatcgtggt
gtggaaggcatggaaggccctcaaggctcccagggattaatagggcaaggaggatttcca
gggcagtttggggaacaaggtgcacctggagatccaggtattcctggggcttctggtgac
agagggaatgttggaaacattggccttccaggaagaaaaggtgtgcatgggagcaaagga
cttcctggattagatggtttgccaggttctaaaggcttgccaggatcaccaggtccggat
ggatatggcacatcaggttttataggtgctttgggtgagaagggtccagcaggagaccca
agtcccattgaaggcagtagaggacctcctggccagaaggggcaaagaggggatccaggt
tggcgaggttcagctggcgctcctggaccagatggaagaccaggatttcctggagtctcc
aatatatctggtatacctggtgatgtgggttcacctggttttgatggagtaccaggttac
cctggagttccagggattccaggcacagctggatcacttgccatcaaaggagaagaggga
tcaataggaccgacgggagaagatggtctaaaaggaataaaaggagcccagggcccagat
ggaagacctggaatatcaggcttgcctggcgcaaaaggatataaaggtgaacaaggagtc
atgggctttattggcccaacaggaatttctggtgactttggccccataggacctaaagga
gatagaggccccactggttttcagggacctccaggttcccccggattgccacctttactt
cctaaactggttgctgagcgaggggcaccaggagcccctgggaaaataggcccccctggc
cctgcgggtgaaatgggtcctcatggtcccccaggagatccaggttttagaggcccgata
ggcaaaccgggagcaccaggaagaggaggcatagctgcaactccaggcttcagaggtgat
caaggaggacaaggactgcacggcctagcaggctttgaaggtgcagcaggtgctcctggt
actcctggcattcctggtatgccaggccgcagtgttaacataggttatcttcttgtgaag
cacagccaatctattcaagagccaatgtgtccagagggcatgaggcaactttggagcggc
tacagtttattgtactttgaaggacaagacaaagcacataaccaggatctcgggctggct
gggtcatgtttggctcgattcagcactatgcctttcctttactgcaatccgggagatgtc
tgctactatgcaagtcgtaatgataaatcctactggctctcaaccacagcccctcttcca
atgatgcctgtggcagaagaagaaatcaggccttatatcagtcgctgttctgtctgtgaa
gctcctgctcttgccattgctattcacagccaagatgttactattcctcactgtcctgaa
ggatggcgcagtttatggattggttactctttccttatgcacactgcagctggtgccgaa
ggaggagggcagtcactggtttctccaggtagctgcctggaagacttcagagccacacca
ttcattgaatgcaatggtgctcgggggacctgccactactttgcaaacaaatacagtttt
tggcttaccaccattgaccatcattttcaacactcaccttcttcagatactctcaaggct
ggactcatccgaacacatataagcagatgccaagtgtgtatgaaaaatttgtaa
DBGET
integrated database retrieval system
