Pseudonaja textilis (eastern brown snake): 113441448
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Entry
113441448 CDS
T09005
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113441448 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptex04131
]
113441448 (RABGEF1)
Membrane trafficking [BR:
ptex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113441448 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
113441448 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
BTB_2
DUF5601
zf-A20
BTB_3
Motif
Other DBs
NCBI-GeneID:
113441448
NCBI-ProteinID:
XP_026564238
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MVVVTGQTKACGHLGDAMSSSDAEDDFQEPATPTATQAEHSLPLLPQQFPEVVPLNVGGT
HFMTRLSTLRRHEDTMLSAMFSGRHYIPTDAEGRYFIDRDGTYFGDVLNFLRSGDLPPRE
RVRSVYKEAQYYSIGPLLDSLEELQPLKGEKVRQAFLGLMPYYKEHLERIIEIAKLRAMQ
RKARFAKLKICVFKEEMPITPYECPLFNSLRFERSEGEAKLFEHHCEVDVSFGPWEAVAD
VYDLLHCIVTDLSDRGITVDHQCIGVCDKHLINHYYCKRPIYEFKITWWRKPVKGREEAE
RRRQRVRRREAGEGSLSLGWVWSRKQAAEKSRSKMSVKSERRGIHVDQSELLCKKGCGYY
GNVAWQGYCSKCWREEYQKARQKQIQEDWELAERLQREEEEAYANTHTHGAQSLTFTKFE
EKKTSEKLRKVATVKKFFGASSRPGTKKEVPEAKAPSPSISRQVSIETDRVSKDFIEFLK
TYNRAGQEVYKQCKLFLDTMHRKRELSIEEQSEYAQSLYQNVADKLQTRWKVPPEKVEKV
TDQVEKYIMTRLYKYVFCPETTEDEKKDLAVQRRIRALHWVTPQMLCVPVNEEIPEVSDV
VVKAITDIIEMDSKRVPRDKLACITSCSKHIFNAIRTTKAEPASADDFLPTLIYIVLKGN
PPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSG
QTSPKKQEPENWPANVCVGMRQMYRNLGLLSQLNERQERIVSEAKKLERDLIDWTDGITK
EVQEIVEKYPLEIKAPNPALAAIDSENVENDKLPPPLQPQVYAG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggttgtagtcacagggcagaccaaagcttgtggacacctgggcgatgccatgtcgagc
tcagatgcagaggatgattttcaagagcctgccactccaacagcaacccaggcagagcac
tccctgcccctgcttcctcagcagttccctgaagtagttccactaaatgttggaggcacc
catttcatgaccaggctgtcaacactgagacgtcatgaagacaccatgttgtcagccatg
ttcagtggtcggcattacatcccaacagatgctgagggcagatattttattgacagagat
ggaacatattttggtgatgtacttaattttctacgatctggtgacttacccccaagagaa
cgagtgaggtctgtttacaaggaagctcagtattattctataggaccattgctagacagt
ctagaagagctccagcccctcaaaggagagaaagtccggcaggcgttcctgggcttaatg
ccttattacaaagagcatctagaacgaatcattgaaatagccaagctgagggcaatgcaa
aggaaagctcgatttgctaagctaaagatctgcgtcttcaaagaagagatgcccatcaca
ccctacgagtgcccacttttcaactccctccgttttgagaggagtgaaggagaggccaag
ctttttgagcaccactgtgaggtggatgtgtcctttgggccatgggaagctgtggcagat
gtgtacgacctcctccattgcattgtgacagacctttccgataggggcatcacagtggac
caccaatgtattggtgtgtgtgacaaacacttgattaaccattactactgcaagcgccca
atctatgaattcaagatcacgtggtggcgtaaacccgtcaagggacgggaagaagctgag
agaagaaggcagcgggtgaggcggagggaggccggagaggggagcctgtccctcggctgg
gtttggtcccggaagcaagcggcggagaagagcaggagcaaaatgagtgtgaagtcagaa
cgccgagggatccatgttgatcagtcagaactgctttgcaagaaaggatgtggctactat
ggcaacgtagcttggcaaggctactgttccaaatgctggagagaagagtaccaaaaagcc
aggcagaagcaaatccaggaagactgggagcttgctgagagactacagcgtgaagaagaa
gaggcctatgctaatactcatactcatggggctcagtcactaactttcacaaaatttgag
gaaaaaaaaacaagtgagaagctgcggaaagtggcaacagtgaagaaattctttggagca
tcttcgcgtcctggaactaagaaggaagtcccagaagccaaggcgcctagtccttctatc
agtaggcaggtcagcattgaaaccgatagagtgtccaaggacttcattgaatttcttaag
acctacaatagggctggccaggaggtctacaagcagtgcaaactgttcctggacacgatg
catcgcaagcgggagttgagtattgaggaacagtctgaatatgctcagagcctctatcag
aatgtggcagataagctacagactcgctggaaagtgcctccagaaaaagtggaaaaagtg
acggatcaagtggagaaatacataatgacccgcttgtataaatacgttttctgcccggaa
accacggaggatgagaagaaagatctggctgtccagagaagaatcagagctttgcactgg
gttactccacaaatgctttgtgttcctgtcaatgaagaaatccctgaagtctcagatgta
gttgtgaaagctatcacagacatcattgaaatggactcaaagcgtgtcccccgggacaag
ctggcctgcatcactagctgcagcaagcacatctttaacgccatcaggaccacaaaggct
gagccagcttcagctgatgactttttgcccactctcatctacattgtcctgaagggcaac
ccacctcgcctgcagtccaacattcagtacatcactcggttctgcaatcccagcaggctg
atgactggggaagatggatattactttacgaacctgtgttgtgctgttgccttcatagag
aagttggatgctcagtccttaaacctgagccaggaagactttgaccgctatatgtctggc
caaacctctccaaagaagcaagaacccgagaactggccagctaacgtatgtgtggggatg
cgccaaatgtacaggaaccttggtctcctctcacaactgaatgagaggcaggagaggatt
gtcagtgaggccaaaaagcttgagagggacctcattgattggactgatgggatcaccaag
gaagtccaggagattgtggagaagtaccctctggagattaaagccccaaacccagccttg
gcggccattgactctgaaaatgttgaaaatgacaaactgccccctccgctgcaacctcag
gtttacgctggatga
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