Pseudonaja textilis (eastern brown snake): 113441630
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Entry
113441630 CDS
T09005
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113441630 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptex04121
]
113441630 (TRIM54)
Ubiquitin system [BR:
ptex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113441630 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
RHH_9
Prok-RING_4
UvrD_C
Zn_ribbon_FGT1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
113441630
NCBI-ProteinID:
XP_026564523
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCEEHEEEKINIYCLTCEVPTCSMCKVFGAHKDCEVAPLTNIYKRQKGELSDGIAM
LVAGNDRIQAIITQMEEICKTIEDNARRQKQHLCLRFDSLYSILEERKKELLQEIGREQE
EKVQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQSKELIKKITDMSKASMSS
RPESGYENMDHFSINVDHVAEMLRTIEFQTDISGEETESEGIIAEGSVEAGEEDHPEGSE
GPEGAEDGENLSRFRPKPPNIPPRGQH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctggggacttcacagagcatggataacctg
gagaagcagcttatctgccccatctgtttggagatgttcaccaagccagtggtcatcctg
ccctgccaacacaatctctgtcgtaagtgtgccaacgacatctttcaggcctccaaccca
ctgtggcaatcccgtggatctacatcagtgtcctcaggaggccgattccggtgcccatcc
tgtcggcatgaagtggtgctggaccggcatggagtttatggcctgcaacgcaatcttttg
gtggaaaacataattgatatctacaagcaagaatcctctcggcctctccatgccaaggca
gagcagcagctgatgtgtgaagaacatgaagaggaaaagatcaacatatactgcttgacc
tgtgaggttccaacctgctctatgtgcaaagtctttggagcccacaaagactgtgaagtg
gctcctctgaccaacatttataagcgccaaaagggggagctgagtgatggcattgccatg
ttagtggcagggaatgaccgtatccaagccatcatcacccagatggaagagatctgtaaa
actattgaggataatgctcggcgacagaagcagcacctttgtctgcgctttgactctttg
tacagcatcctggaggaacgcaaaaaagagctgttgcaagaaattggacgagagcaagag
gaaaaagtccaaagggtgcgggggctcatccggcaatatggagaccaccttgaggtctcc
tctaagctggttgagtcagccatccaatccatggaggaaccccagatggccctctatctg
cagcagtcaaaggagctgatcaaaaagatcacagacatgtccaaggcatccatgagtagc
cggcctgagtctggctatgaaaacatggaccatttctctatcaatgtagatcacgttgct
gaaatgctgagaactattgaatttcagacagatatttctggagaagaaactgagtctgaa
ggaattatcgcagaaggaagtgttgaagctggagaggaagaccatccagaaggatcagag
gggcctgaaggagcagaagatggagagaacctgtctcgattcagaccaaagccacctaat
ataccacctcggggacaacactga
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