KEGG   Pseudonaja textilis (eastern brown snake): 113441718
Entry
113441718         CDS       T09005                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex03410  Base excision repair
ptex04140  Autophagy - animal
ptex04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113441718 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113441718 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    113441718 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptex03036]
    113441718 (HMGB1)
   03400 DNA repair and recombination proteins [BR:ptex03400]
    113441718 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptex04147]
    113441718 (HMGB1)
Chromosome and associated proteins [BR:ptex03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    113441718 (HMGB1)
DNA repair and recombination proteins [BR:ptex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113441718 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     113441718 (HMGB1)
Exosome [BR:ptex04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113441718 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 DUF4667 NOA36
Other DBs
NCBI-GeneID: 113441718
NCBI-ProteinID: XP_026564649
Ensembl: ENSPTXG00000005350
UniProt: A0A670YD45
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKSYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSGEDKLPFEKKAAKLKEKYEKDIAAYRAKGKPDAAKKVAPKPEK
SKKKKEEEDEDEDDEDEDEDEEEEEEEEEEEEDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcatatgcctattttgtg
caaacctgccgggaagagcacaagaagaaacacccagaagcctcagtgaatttctcagag
ttctcaaagaaatgttcagaaaggtggaagacaatgtccgctaaggaaaaggggaaattt
gaagatatggcacgagctgacaaggttcgttatgaaagagaaatgaaaagttatgtaccc
ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttca
gcatttttcttattttgttctgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tccattggggatgttgcaaagaaacttggagagatgtggaataatacatctggagaggat
aaactgcccttcgaaaagaaggctgctaaactgaaggagaaatatgaaaaggatattgct
gcataccgagctaagggaaagcctgatgcagccaaaaaggtagctcctaagcctgagaaa
agcaagaaaaagaaagaagaggaagatgaggatgaggatgatgaagacgaggacgaggac
gaggaggaagaagaggaggaggaggaagaagaagaagatgatgaataa

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