Pseudonaja textilis (eastern brown snake): 113442021
Help
Entry
113442021 CDS
T09005
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03440
Homologous recombination
ptex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113442021 (BLM)
03460 Fanconi anemia pathway
113442021 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptex03032
]
113442021 (BLM)
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113442021 (BLM)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113442021 (BLM)
DNA replication proteins [BR:
ptex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113442021 (BLM)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
113442021 (BLM)
Bloom's syndrome complex (BTR)
113442021 (BLM)
FA (Fanconi anemia) pathway
113442021 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
BDHCT
RQC
HRDC
BLM_N
ResIII
Motif
Other DBs
NCBI-GeneID:
113442021
NCBI-ProteinID:
XP_026565103
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MNCLDDCASEHLGGTKPLAPKDKNINSSLEKQSAIKNKQTKINVLFKTTLKVQEGKQEYS
NDQHAKNLDCFISSVKEGDAEDKVGGSEIPTPDNNCLNNSFIDLTDIWEDMEDFETTGPQ
KICPKLSVSFRDKLSVNNGKTAKKPSISKSKISSTGRDNEKCDDVYICTNRKTQTLREEQ
EGGSLPVPRLDSSNSSQRDFSNGEHEEEKSLETFQTEKKEKSWIGQNDSGLPLSGNEEPD
DGRDDPPVFSESEDYVDFIPPSPEEEMLPALFGLKSTRSADETTLNPALSTNQLPEFGES
TKRSEGRKEGQPLLCVMEDICKLVDSVPEGELKSLVGGQELLRLRDCRRKLLRNPRNGNR
TGADTFLDITCKHNFKHDSSHDGSYSSQLPQGGAPTPGPFSGKRLGDVAPLHGLHPPPPQ
GWAGPDPSVSVKGSTWDTSSPAVERPGASGPRREAGAIAGRQNPNLEAETRWWPPALSGT
GSESRREQAPPLMSSGGSESPWATGGQKLHQDDFDIEDLDDLDDAVSASLARGASQGLAR
PAAGASPAPKLFLEGNSLASKEGADFLHSNFSFTDLSVSGKSCPVPPLMKDTPSRNAALD
PFRGLAFPHSNEMLKIFHKKFGLHHFRTNQLEAINAALLGQDCFILMPTGGGKSLCYQLP
ACVSEGVTIVISPLRSLIVDQVQKLTSMDIPATYLTGDKTDAEASRIYMQLSKKDPIIKL
LYVTPEKVCSSGRLMSALENLYQRQLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRKKFS
LVPMMALTATANPRVQKDILNQLEMHQPQVFTMSFNRHNLKYYVLPKKPKNVALDCLQWI
RKYHPCDSGIIYCLSRYECDSVANALQGGGLSALAYHAGLPDGTRDLVQQKWINQDGCQV
ICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQESGRSGRDGEISHCLLFYSYSDVTRLR
RLILMEREGNSHTRQTHFNNLYSMVHYCENIMECRRIQLLAYFGETGFNPRFCKEHPEVS
CDNCSKQQVYKLKNVTEEVKNIVRFVKEYCGEKGTRNIKRNAGRYTLNMMIDIFLGSKAA
KIQQGLFGKGAAYSRHNAERLFRKLVLDKILDEDLYITANDQAIAYIQLGEKAVAVLNGS
LKVEFCETESASNIRRQRALDTKMSLREEMVKKCLSELTDVCKNLGKVFNIHYFNIFNTA
TLKRIAETLSSDPEVLLQIDGVTEDKLEKYGAEIIGVMQKYCTEILSVENKPRAATEVDV
SRYGSEGEEGEATSTTSSYFQTKNGKGRKRKKSHFFRESKKRKGSGGQQAYSRRSYKACK
SASSNSRSSTSRVFPGQPGAGKRPGVMAPPKPQSRQYLKPSYTLL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaattgccttgatgactgcgcatcagaacatctgggtggaacaaaacctctggccccg
aaggacaagaatatcaattcttctttggaaaaacaaagtgctattaaaaacaaacaaacc
aaaattaatgtgctgtttaaaacaacactgaaagttcaagaaggaaaacaagaatattcg
aatgatcaacatgccaagaatttagattgttttatctcttctgttaaagaaggtgatgca
gaggacaaagtggggggatctgagatcccgaccccagacaataattgtttaaacaactca
tttattgaccttactgatatttgggaagacatggaagattttgaaacaactggaccacag
aaaatatgtccaaaactgtctgtatcatttcgagataagctgtctgtaaacaatggaaag
actgcaaaaaaaccctctatcagcaagtcaaagatatctagcacaggaagagataatgaa
aaatgtgatgatgtgtatatttgtacaaataggaaaacacaaacacttcgtgaggaacaa
gagggaggcagcctgcctgttcctcgtcttgattcttctaattccagtcagagagatttt
tcaaatggagaacatgaagaggagaaatctttggaaactttccagacagagaaaaaagaa
aaatcttggattgggcaaaatgattctggcctccccttaagtgggaatgaagagcccgat
gatggaagggacgaccctccagtgttcagtgagtctgaggactatgtggacttcataccc
ccatccccagaagaggagatgctgcctgctttgttcgggctgaagagcactagatcagct
gatgagacaacactgaatcctgcactctcgacgaaccaacttccagagtttggagaatcg
accaaaagaagcgaaggaaggaaggaaggccagcccctcctctgtgtaatggaagacatc
tgcaagctggtggactccgttccagaaggagagctgaagtctttggtgggtggccaagag
ctgcttcgtctcagagactgcagaagaaaactgttgcgcaatcccaggaacggaaaccga
accggtgcggatacatttctagatataacctgcaaacataattttaagcatgacagctcc
cacgatggaagttactcttctcagcttcctcaagggggcgctcctactcctggaccattt
tccggcaagcggctcggtgacgttgccccgctgcatggccttcacccgccaccccctcaa
ggatgggccggccctgatccgtccgtttctgtgaaaggttctacctgggacacgtcctct
cctgccgtggaacgtccaggcgcatctggccccaggagggaagccggtgccatagctgga
cgccaaaacccaaacttagaagccgagacgcgctggtggcctccagcgctgagtggaaca
ggttcggagagccgaagggagcaggctcctccgctcatgagcagcgggggaagtgagagt
ccttgggcaactggagggcagaagcttcatcaggatgattttgatatcgaagatttggat
gacttggacgatgcagtgagtgcttccttagccagaggcgcttcccagggcctggcccgg
ccggctgcaggcgcctcccctgcaccaaaactgtttttggaaggaaactcgctggcgtcc
aaggaaggcgctgattttctgcatagcaatttttctttcacagacctttctgtgagcggc
aagagttgccctgttcctccactaatgaaggacacgccttccagaaacgctgctctggac
ccgttcagaggtctggcatttccacattctaacgagatgctgaagatattccataaaaag
tttggtctccaccattttcggaccaatcagcttgaagccatcaatgctgctttgctgggc
caggactgcttcatcctgatgcccacaggaggcggcaagagtctctgctatcagctgcca
gcctgtgtttcagagggagtcaccatcgtcatctctccgttgaggtccctgatcgtggat
caagtccagaagctgacctcaatggacattccagccacgtacctcacaggtgacaagact
gacgccgaagcatcccgaatttacatgcagctctcaaagaaggaccccatcataaaactc
ctctacgttactccagagaaggtttgctcgagcggtcggctgatgtcagcgctggagaat
ctgtaccagcggcagctcttggctcgcttcgtgatcgatgaggcccactgcgtcagtcag
tggggtcatgattttcgccaagactacaagcggcttaacatgctccgaaagaagttctcc
ttggttcccatgatggctcttactgccaccgccaacccccgagtgcagaaggacatcctg
aaccaactggagatgcaccagccccaggtgtttacaatgagctttaacaggcacaacttg
aaatactacgtgttacccaagaaacccaaaaatgttgctttagattgcttacaatggatc
agaaaataccacccctgtgactcgggaataatttattgtctctcgcggtatgaatgtgac
tccgtggccaacgccttgcaagggggcggcctctcagccctggcgtaccatgctggcctc
ccggacggcacccgagacctcgtgcagcagaagtggatcaatcaggatggatgccaggtc
atctgtgccaccattgcatttggaatggggatcgacaagcctgacgtgcgcttcgtgatc
catgcctccctccctaaatccatcgagggctactaccaggagtccggccgaagcgggcgg
gacggcgaaatctcccactgcctccttttctacagctacagtgacgtgaccaggctgagg
cggctcatcctgatggaaagggagggcaacagccacacccggcagacgcacttcaacaac
ctctacagcatggtccattactgcgagaacatcatggaatgccggaggatacagttgctg
gcatacttcggagaaacgggctttaatcctagattttgtaaggagcaccccgaagtaagt
tgcgacaactgctccaaacaacaggtatacaagttgaagaacgtgaccgaagaagtaaaa
aacattgtgaggtttgtaaaggaatattgtggtgaaaaaggaactagaaacatcaagcga
aatgcaggaagatataccctcaatatgatgatcgacattttcttgggttcaaaagctgca
aagattcagcagggtctctttggcaagggagcagcctactcccgccataacgccgagcga
ctttttaggaagctggtgctggacaagattctggatgaagacttgtacatcactgctaat
gatcaggcgatagcctacatccagctgggagaaaaagctgttgctgtgctgaatggctcc
ttgaaggtggagttctgtgaaacagaaagtgccagcaatattcggaggcagagggctttg
gacaccaagatgtccctacgggaagagatggtgaagaaatgtctctccgaactcacagat
gtctgtaaaaaccttgggaaagtgtttaatatccactattttaatatttttaacactgcc
acattaaaaagaatagcagagacattgtcgtcggatccagaagttttgcttcagattgat
ggtgtcacagaggacaaattagagaagtatggagcagaaataataggcgtgatgcagaag
tattgtacagagatactctcagtggaaaacaagcctcgcgcagccacagaggttgacgtt
agcaggtatggcagtgaaggtgaggagggagaagcaacgtctacaacgtccagctatttc
caaaccaaaaatggcaagggaaggaagaggaagaagtctcatttttttagagaatcgaag
aaaagaaaaggatctgggggacagcaggcttattctaggaggagttacaaagcctgcaaa
agcgcatcgtccaattctagaagttctacgtcccgtgtttttcccggccaaccgggagct
ggcaagaggcctggagtgatggcaccgccaaagccccaaagcagacaataccttaagcct
tcttacacgcttttgtga
DBGET
integrated database retrieval system
