Pseudonaja textilis (eastern brown snake): 113442541
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Entry
113442541 CDS
T09005
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03440
Homologous recombination
ptex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113442541 (BRIP1)
03460 Fanconi anemia pathway
113442541 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113442541 (BRIP1)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113442541 (BRIP1)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113442541 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
113442541 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
113442541
NCBI-ProteinID:
XP_026565988
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MASRTSEYTIGGVKILFPCKAYPSQLAMMNAIVKGLSSKQHCLLESPTGSGKSLALLCSA
LAWQQSLYEKPLDDLCSKECKKTEALKLCRCPCHANKLSSQDPEGGCQTTSSFFPSHATE
TSSGGGSSSTSKESVSRITLASKLSAKHQASFHEEDDSDNDFKVERKRIRPLETEQQARK
RHRLTSGTQLTDASEVHEQRKNGELTVTLGKTEPPSRKTVSPSSPCMTCSCSAIEQNAPK
AAEAKKENGGKSPIPKIFFGTRTHKQIAQIVKELHRTGYSSVRMTILSSREHSCVHPRIS
RGSNKNEKCAELLEGKEGVSCSFYHGAHRLTEHLSIPSADKKHQTWDLEELVSLGKKFRS
CAYFAARELMVCAEIVFCPYNYLLDSQIRQSMEIELKDQVLILDEAHNIEDCARESASYS
VTEEQLKLAREELDAMVNNHIRPNDHQPLRAVCYSLTNWLRGACSQLIQSGYETSSKVWS
GSQMVTNFHEMGITDASFPILQKHLHAVLEKEEKFPGLENTVSVPVISPSTQVILKGLFM
VIHYLFKGNHRFADDYRIALQQTFTWMNENPPDAPDKNGFLVCTRKKMRHKTAVNSLNFW
CLNPAVAFSDLSSVVRSIVLTSGTLSPMDSFSSELGVNFSIQLEANHVIRNSQVWVGTIG
AGPKHRQLRATFQHTETFEFQDEVGELLLSVCQTVRRGVLCFLPSYKMLDKLKDRWLHTS
LWEKLELIKTVIVEPKGGDKADFDELLQIYSDAIKSQNGKDGALLIAVCRGKVSEGLDFS
DDNARAVLTIGIPFPNWKDLQVELKRKYNDQHSKARGLLTGSQWYEIQAYRALNQALGRC
IRHRSDWGALILVDDRFGKSPNKYTAASPGSPFSTEQNKFTDSSPLGSPADGRRKRANGQ
FSAGSIESYFTKMPDSIPAGRKNYVFKATGQTERAVEKDGPSVPYGPQENNLWVQKDQPI
RQLPDGKMINGSPRTLMTEKCPHERQHTGHKDVEKVVSSPRRTNVELSKSDPGIETDAGN
DRLCFTPELYDDDDEEEVVEEKNEGSISNYNSTLTSSETANTPVLVEELCPSSAQKLGDA
TSRFKVEAGVGAERSGITENSRNNRSAVEEAGNKVGIEETEPEAKGKENQLPGSQSKGLK
VQRRYKRRARKPSNNREAHQQQVTKGGIRFWER
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgaacgtcagaatacaccattggtggtgtaaaaattctcttcccttgtaag
gcttatccatcgcaacttgctatgatgaatgcaattgtgaaggggttgagctccaagcaa
cactgcctgctagagagtcccactggaagtgggaaaagcttggcgctgctctgttctgca
ctggcctggcagcagtcactctatgaaaaaccactggatgacttgtgctcaaaagaatgc
aagaagaccgaggctttgaaactctgccgatgcccatgccatgccaataaattgtccagt
caggatccagaaggaggctgccaaaccacatcatctttcttccccagccatgcaacagag
acctcatcaggcggtggaagtagctcaaccagcaaagaaagcgtctcacgcattacgttg
gcttcaaaactgtctgccaaacaccaagcctcattccacgaagaagatgacagtgacaac
gattttaaagtggaaaggaagaggatccgtccactcgaaacggagcagcaggcgagaaaa
cgacaccggctgacctcaggaacccaactaacggatgcttcagaagttcatgagcagcga
aaaaatggggaattgacagtgactctcggaaaaactgagcctccctcacgtaaaacagta
agtccttccagtccctgcatgacgtgttcctgctccgccatcgagcaaaacgccccaaag
gctgctgaggccaagaaggagaatggagggaagtcccccatccccaaaatattttttggc
acccgaactcacaagcaaatagctcagattgtgaaggagctgcacaggacgggctactca
agcgtccgcatgaccattctgtcaagtagggagcattcctgcgtccatccgaggatctcc
cgaggcagcaacaagaatgaaaaatgcgctgagttgctggaaggaaaagagggcgtgtct
tgttccttttatcatggagcccacaggcttacggagcatctctccataccgtctgcagat
aaaaaacatcagacttgggatttagaagagctggtgagcttgggaaagaaattccgatcc
tgcgcctactttgcagcacgtgagctcatggtgtgcgccgagattgtgttctgcccttac
aactacctgttggactcccagataagacaaagtatggaaattgagttgaaagaccaggtg
ctgattttagatgaagctcacaatatcgaggactgtgcccgagagtcggccagctacagt
gtgacggaagaacagctcaagttggctcgagaggagctggacgctatggtgaacaaccac
attagaccgaacgaccaccagcctttgcgtgctgtgtgctacagtctgacaaattggtta
aggggcgcctgcagtcagctgatccagagcggttacgagacctcaagtaaagtctggagc
ggaagtcaaatggtgaccaatttccacgaaatgggaataacggatgcatcgtttcccatt
ttacagaaacatcttcacgctgtgctcgaaaaagaagaaaagttccctgggttagaaaat
acagtttccgttccagttataagtccttcaactcaagttatcctgaaaggtctatttatg
gtcatccactacctgttcaaaggaaatcacaggtttgctgacgattaccgaattgccctg
cagcaaactttcacctggatgaatgaaaatccacctgacgctccggataagaatggtttc
ttggtctgtacccggaaaaaaatgcgacacaaaacggccgtaaacagcctcaatttctgg
tgcttgaatccagcagtggccttttccgatttaagcagcgtggtccgatccatcgtttta
acctcagggacgctttctcccatggattccttttcctccgagcttggggtgaacttctcc
attcagcttgaagccaaccatgtcattagaaattcacaggtctgggttggtaccattgga
gccggcccgaaacaccggcagttacgggcaactttccaacatacagaaacctttgagttt
caagatgaagtcggcgagctcttgctatcagtctgtcagacggtgcgacgtggggtgctg
tgctttctgccctcttacaagatgttagataaactgaaggatcgctggctgcacacgagc
ttgtgggagaagcttgagctgattaaaaccgtcatcgtggaacccaaaggaggcgacaaa
gctgattttgatgagctacttcaaatatactccgatgccatcaagtctcagaacggcaaa
gatggtgcgctgcttattgctgtgtgcagaggcaaagtcagcgaaggcctggacttctcc
gatgacaacgcccgtgcggtcctcaccattgggattccgtttccaaactggaaggatctt
caggtggaactgaaaaggaaatacaacgatcaacactcaaaagccaggggacttctgaca
ggaagccaatggtatgaaatccaggcctacagagctctgaaccaagccctcggcagatgc
attcgccaccgaagcgattggggagcacttattttagtcgacgaccgttttggaaagagc
cccaataaatacacagccgcctccccaggttcacctttctccacagagcaaaataaattt
acagactccagccccctgggttcccccgctgacggcaggaggaagagagcgaacggtcag
ttctctgctggcagcatagaaagttacttcactaaaatgccagattcaataccagcagga
aggaagaattacgtcttcaaggctactggccaaactgaaagagcagtagagaaagacggc
ccctctgttccttatggaccccaggaaaataatttgtgggtccaaaaagaccaaccaata
agacagttgccagatggcaaaatgatcaatggttctccaagaaccttgatgactgagaaa
tgtccccatgaaaggcagcacaccggacataaagatgtggagaaagtggtgtcttctcca
aggagaacaaatgtggaactgtccaagtcagacccaggcatcgaaactgatgctggaaat
gacagactctgttttacacctgaactgtatgatgatgatgatgaagaagaggtggtggaa
gagaagaacgaaggctcgatttccaattacaatagtactttgacgtcctctgaaaccgca
aacacccccgttctggtggaagaactttgtccatccagcgctcaaaaactaggagatgcc
acctccaggtttaaagttgaagcaggagtgggcgcagagcggtcggggatcacggagaac
agccggaataacagaagcgctgttgaggaagctgggaataaggttggcattgaggaaact
gagccagaggcgaagggaaaggaaaaccagcttcctggatctcaaagcaaagggctgaaa
gtacagagaaggtataaacgaagagccaggaagccatctaataacagagaggcacaccag
caacaggtaaccaaaggaggaattagattctgggaacgctga
DBGET
integrated database retrieval system
