Pseudonaja textilis (eastern brown snake): 113442839
Help
Entry
113442839 CDS
T09005
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113442839 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113442839 (DDX42)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113442839 (DDX42)
Spliceosome [BR:
ptex03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113442839 (DDX42)
Complex B
113442839 (DDX42)
Complex C
U2 SnRNP specific factors
113442839 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113442839
NCBI-ProteinID:
XP_026566436
Ensembl:
ENSPTXG00000013816
UniProt:
A0A670Z831
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFSISSGKKEEPKLPQQSHSAFGAPGSSGFGKTPPPQLPSFYK
IGSKRANFDEENAYFEDEEEDSNNVDLPYIPAENSPTRQQFHSKATDSDSEDDPLEAFMA
EVEDQAARDMKRLEDKDKERKNSKGIRDDIEEEDDQEAYFRYMAENPTAGVVPEEEEDNL
EYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNL
RVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGS
GKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVY
GGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQV
RSVASHVRPERQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDITQIVEILSSG
PNKWNWLTGRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHDLGLLHGDMDQSERNKVI
SDFKKGTFPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTL
LTQKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYR
ERPGLGSENVDRGNNSVMVNYEAYKPSSGAMGDRLSAMKAAFQSQYKSHFVAASFSNQKT
GSSSAGASGWTSAGSLNSVPTNSAQQNSAKPDSPIAVSGLAKGIPGFTSSGNLNSITSFP
SAGIQGYNSANAAINNNNREGNSGGRERYNDNRGSSRHSDSQRHGDSSRHSDGQRHGEGY
RHGENRHGDSHRHNEGRHSGGGSSSNSRHGDNRNNGDSRNNNDRNNNENRNIENRNNESK
KESSNRDNSKTDGFAVPEPPKRKKSRWDS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaacaagggtggacctggcactaagagaggctttggttttggtggcttttca
atatcttctggaaagaaggaggagcccaagctgccacaacaatctcatagtgcttttgga
gctcctggttcttctggatttgggaagacaccaccacctcagctgccatccttttacaag
attggatctaaacgagcaaattttgatgaagagaatgcatattttgaagacgaggaggaa
gattccaataatgttgacttgccatacattcctgctgaaaactctcctactcgtcagcaa
ttccattccaaagcaactgactcagatagtgaggatgacccattagaggcattcatggct
gaagtggaagatcaagctgctagagacatgaaaagattagaagataaagataaggaaaga
aagaattcaaagggtatacgcgatgatattgaagaagaagatgatcaagaagcttatttc
cgttacatggctgaaaaccccactgctggtgtggttccagaagaggaggaagataacttg
gagtatgatagtgatggcaatccaatagcaccatctaaaaaaattattgatcctctgcca
cctattgatcattcagagattgaatacccaccgtttgagaaaaacttctacgatgagcat
gaggaaatcaccagtcttactccacaacaagtagtggagttgcgccataagttaaatctc
cgggtttctggtgctgctcctccaaggccaggaagtagttttgctcattttggttttgat
gagcaacttatgcaccaaatcagaaaatcagaatacactcaacccactcctatccagtgt
cagggaattccagtagcactcagtggcagagacatgattggcattgcaaaaaccggcagt
ggaaaaactgcagcgttcatttggcccatgttaatccacattatggatcagaaggagttg
gagccaggtgatggtcccattgcagtaattgtgtgtcccactagagaattgtgccaacag
atccatgctgagtgcaagcgttttggaaaagcctacaatctgcgatctgtagctgtatat
ggtggaggcagcatgtgggaacaggccaaggcacttcaagaaggggcagaaattgttgtc
tgcactccaggccgtttgattgatcatgtgaagaagaaagccacaaaccttcagagagtc
acttaccttgtgtttgatgaagctgacaggatgtttgatatgggttttgaatatcaagtc
cgatcagttgccagtcatgtccgccctgaaagacagactcttctgttcagtgcaactttt
cggaagaagattgagaaactggccagggatatcctgattgatccaattcgagtggtgcag
ggagatattggagaggcaaatgaagatattactcaaattgtggagatcctcagctctggt
ccaaataaatggaactggctgactggtcgtctagtggaattcacttcttcagggagtgtc
ctcctttttgtcaccaagaaggcaaatgcagaagaattggccaacaaccttaaacaggag
ggtcacgatctagggctcctgcatggtgatatggaccagagtgaaaggaacaaagtcatc
tcagatttcaagaaagggacctttccagttctggttgctacagatgtggctgctcgtggt
ctggatattccttccattaagactgtgatcaattatgatgtggctcgggatattgatact
catactcatcgaattggacgtactggtagagcaggggaaaagggtgtggcctacaccttg
ttgactcagaaagatagcaactttgctggagatcttgttcggaatttggaaggagccaat
cagcacgtttcaaaagaacttctggatttagctatgcagaatgcttggttccggaaatca
cgtttcaagggagggaagggcaagaagctaaatattggtggtggtggcctgggataccgt
gagcggcctggcttaggatcagagaatgtggatcggggaaacaacagtgtaatggtcaac
tatgaagcatataagccatcctcaggagcaatgggggacaggttatctgcaatgaaagca
gcgtttcagtcccagtataagagccattttgttgctgccagctttagcaaccagaagacg
ggcagttcttcagcaggtgccagtggttggaccagtgcaggcagcttaaactctgtgcca
acaaattcagcccagcagaactcagctaaacctgacagtcccatagcagtatcaggttta
gcaaaaggtatcccaggtttcacaagttctggaaacttaaacagcatcactagctttcca
agtgcaggcattcagggttacaatagtgcaaatgccgccatcaacaacaacaacagagaa
ggcaacagtggaggcagggaaagatacaatgacaatcggggtagtagtcgtcatagtgac
agccagcgccatggagatagcagtcgccatagtgatggccagcgccatggggaaggttac
cgccatggagaaaaccgccatggggatagccatagacacaatgaaggccgacattctgga
ggtgggagcagcagcaatagtcgccatggagacaacagaaataatggagacagccggaac
aacaatgaccggaacaacaatgaaaacagaaatattgaaaataggaataatgagagcaag
aaagaaagcagcaaccgagacaacagcaagacagatggttttgcagttcctgaacccccc
aagcgcaaaaaaagccgatgggatagttaa
DBGET
integrated database retrieval system
