KEGG   Pseudonaja textilis (eastern brown snake): 113443685
Entry
113443685         CDS       T09005                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex03013  Nucleocytoplasmic transport
ptex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113443685 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    113443685 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptex03019]
    113443685 (THOC6)
   03041 Spliceosome [BR:ptex03041]
    113443685 (THOC6)
Messenger RNA biogenesis [BR:ptex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113443685 (THOC6)
Spliceosome [BR:ptex03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113443685 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_DCAF12 WDR54 Beta-prop_SCAP GCK
Other DBs
NCBI-GeneID: 113443685
NCBI-ProteinID: XP_026567851
Ensembl: ENSPTXG00000008832
LinkDB
Position
Unknown
AA seq 327 aa
MDIQRSLELLHMTIYTQSVSPCGRYLAAGNNYGEIAVFSLSAALSSEAKEESKKPVVCFA
AHSGAIYAMVSTDRQLLSAGNGEVKAWNWSEIVKKSCKEAWSRRPPYGSRLEVPEINSLQ
LNLKDNSLLMAGGDCVIHMMDLETGVFTHEFQGHTDYIHCLALREQLRECLSGSEDGTVR
LWDLRIGGQVQSIAVHKYEECRRPQNGKWISCLATDSDWMVCGGGPALTLWHLRSVTPTT
VFPLPQCQQQAMFYQDLILSAGHSPTINHLQISGEVKAQIPCLPRCVHSISINERSAEHK
VLTAAGSSHFIDVFTNFGYRAFSLIFT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggacattcaacgatctcttgagctcttgcacatgaccatatatactcaaagtgtctca
ccttgtggcagatatttagcagccggaaataactatggagaaattgccgtattcagcctg
tcggcagcattaagttcagaagccaaggaggagagcaagaagccagtagtgtgctttgca
gcccacagtggagcgatctatgccatggtgtccaccgatcggcagctgttaagtgctggc
aatggagaggtcaaggcctggaactggagcgagattgtgaaaaaaagttgcaaagaagct
tggagtaggaggccaccttatggaagtagacttgaagtgccagaaatcaacagcctgcag
ttgaacctgaaggataatagtctactgatggctggaggtgactgtgtcattcacatgatg
gacttggagactggagtatttactcatgaatttcagggccacactgattacatccactgt
ttggcccttcgtgagcagctccgagaatgtctgtcaggaagtgaggatgggaccgtacgt
ctttgggatttacgtataggaggtcaagtccaatcaattgctgtccacaaatatgaggaa
tgcagacgccctcagaacgggaagtggatcagttgtttggcgacagattctgactggatg
gtgtgtggcgggggcccagcgctcactctttggcacctacgttcagtgacacccaccact
gtatttcccttgcctcagtgccagcagcaagccatgttctatcaagatctgattctctct
gctggccacagtccaaccattaatcatttacagatcagtggggaagtgaaagcccaaatc
ccttgcctccctcgttgtgtccactccatttccatcaacgaacgctctgcagagcataag
gtgttgacagcagctggaagcagccacttcattgatgtcttcaccaactttggataccga
gccttttcactaatttttacctga

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