Pseudonaja textilis (eastern brown snake): 113443779
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Entry
113443779 CDS
T09005
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113443779 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113443779 (PRPF4)
Spliceosome [BR:
ptex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113443779 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
113443779
NCBI-ProteinID:
XP_026568000
Ensembl:
ENSPTXG00000017153
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MATPRGSTGTKTKASDDGDAPPAKKAPIFYGSLEEKERERILKGESGMMGKEAVKAAIEA
GNINISTGEVFDLDDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF
GEGPAERRERLRNILSVVGPDALKKTKKDDEKSKKCKEEYQQTWYHEGPTTLKTARLWIA
NYSLPRAVKRLDEARFFKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPLSFCHFSSN
SKFLATACWSGLCKIWSVPDCNLVLTLRGHNTNVGAIVFHPKATISLDKKDVNLASCAAD
GSVKLWSLESDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQE
GHSKGVYDIAFHGDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGVSFSPNGYHI
ATGSGDNTCKVWDLRQRRCIYTIPAHQNLITGVKFEPNHGNFLLTGAYDNTAKVWTHPGW
SPLKTLAGHEGKVMGLDISMDGQLIATCSYDRTFKLWMAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctacgccgagaggttccacggggaccaaaacgaaggcgtccgacgatggagatgcc
cctcctgctaagaaagcccccattttctatgggagcctggaggagaaagagcgcgaacgg
atcctgaagggggagtcggggatgatgggcaaagaagccgtcaaagcggccatcgaggct
ggcaacatcaacatctccaccggggaagtttttgacttggacgaccacatcagtgaacgc
caagcggaagtcctggccgaattcgagcgccggaaacgagcgaggcaaatcaacgtttcc
acggatgactccgaggtcaaggcctgcttacgagcgctcggagaacccataacgctgttc
ggagaaggcccggccgaaaggagggagaggctgcgtaatatcctctcagtcgttggtccc
gacgccttgaagaaaaccaagaaggatgatgaaaaatccaagaagtgcaaagaagagtat
cagcagacttggtaccacgaagggccaaccaccttgaagacggcgagactctggattgca
aactactctcttccacgggcagtgaagcgactagacgaagcccggttttttaaggaagtc
cctgaagccacgcggacatcccagaaacaagagcttcacaaatctttaaggtctctgaat
aacttctgcagccaaattggggatgaccgtcctctttccttttgtcacttcagttccaac
tccaaatttttggccacagcctgttggagcggcctctgcaagatatggtccgtgccagac
tgcaacctcgtcctcactttgagagggcacaacaccaacgtcggcgccatcgtcttccac
cccaaagccaccatctcgttggacaagaaggacgtcaatctggcctcctgcgcagctgat
ggatctgtcaagctctggagcctggaaagcgatgaaccggtggctgatatagaaggtcac
acggtgagagtggcccgagtcacttggcatccctctggcagatttttgggcaccacatgc
tatgaccactcctggcgtttgtgggaccttgaagcccaagaggagattctccaccaggaa
gggcacagcaaaggggtctacgacatcgccttccatggcgatggctccttagcaggcact
ggcggcctcgatgcctttgggcgtgtctgggacctacgcaccgggcgctgcatcatgttc
ttggaaggtcacctcaaagagatttacggggtcagcttttcccccaacgggtaccacatc
gctactggcagcggagacaacacctgcaaagtttgggaccttcgccagaggaggtgcatt
tacactatccccgcccatcagaatctgatcaccggagtaaaatttgaaccgaatcacggc
aacttcctgctgaccggggcctacgacaacacggccaaagtgtggacccacccgggctgg
tctcccttgaagactttggccggacacgaaggcaaagtcatgggcttggacatctccatg
gacgggcagttgatcgccacctgctcctacgaccggaccttcaagctctggatggcagaa
taa
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integrated database retrieval system
