Pseudonaja textilis (eastern brown snake): 113443924
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Entry
113443924 CDS
T09005
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113443924 (TNC)
04518 Integrin signaling
113443924 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113443924 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113443924 (TNC)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113443924 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_VIN3
DUF7949
NDNF
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
113443924
NCBI-ProteinID:
XP_026568228
Ensembl:
ENSPTXG00000007871
LinkDB
All DBs
Position
Unknown
AA seq
1869 aa
AA seq
DB search
MALSTWVVASVAIFLFHQDASGGLIKRIIRQKRETGINVTLPEDNQPVVFNHVYNINVPV
GSLCSVDLDSPSGDSDFKVPSEPGKHYQEHTLNEDNQIVFTHRINIPRRACGCAAAPDIK
VLLSRLEELEELVSSLQEQCGSGSGCCSSPQTAKGTIDATPYCSGRGNYSNDICGCICEQ
GWKGPNCSEPECPQNCNERGQCINGQCICDYGYTGYDCGELACPGDCNDQGKCVDGKCVC
FDGYAGDDCSFEVCLVPCSEYGNCVNGQCICMEGFTGVDCSKSLCLNNCNNRGRCVEEEC
VCDEGYTGEDCSELICPNDCYDRGRCINGTCYCETGFTGEDCGDLACPNDCHHNGRCENG
VCVCDEGFLGPDCGEVRCLNDCHNQGQCVNGQCVCDEAFMGEDCRELRCPKDCNNHGQCV
GGKCQCDEDYMGEDCGDLRCLHDCHNRGQCIKGQCVCDEGFVGEDCSQRRCPNDCHKRGK
CVDGQCVCEEAFTGLDCNELRCPNDCNDHGRCVDGQCICDEGYTAEDCSELTCPQDCNRR
GRCVNGVCECNEGFLGEDCGELACINNCNNQGHCLNGQCVCNEGFTSVDCGQRKCLDDCN
NRGQCIDGVCLCDEGYEGPACAGQSCPNNCNDLGRCVAGRCVCEEGFIGADCSDVSPPKN
LMVTEVTDKTINLEWANENVVNEYLISYIPTSIDGLEFQFRVPGNKTSATIRELEPGVEY
FIRVFAILRNKKSIPINARIATYLPAPDGLKFKSVKETSVEVEWDAFNFPFHGWEIIFRS
MKEEENGAIRSSLKSPQTTYLQQGLAPGQQYNVSLVVVKNQTRGPAVSRIVTTKLDAPSQ
IEAKDVTDTTALITWFRPLAEIDGLELTYGPKDTPGDRTSIDLSEDESQYSIGNLKPHTE
YEVILVSRRGLMASDPITENFVTDLDAPQNLRHVSQTDRTITLEWENSRAMPDVYRIKYA
PLSGGDHAEVTVPRSNQATSKVTLSGLRPGTEYGIGVTSVKEDKESFPSTINAGTDLDSP
KDLEVIDPTETAFTLRWKRPLAKIDRYRLTYNTSLGKKNEIEIPPDSTSYILRSLDSGTE
YTIILVAEKGRLKSKPSTVTGSTEEEPELGNLSVAKVYWDGFYLTWTAADGAYETFVIQV
RESNQPEDTQTLTLPGTQRSINLSGLLPNTLYTITIYGITQGYQTKPIFVESTTGAKPEV
GNLTIWGVTPESFNLSWTTSRGNFELFTLEIIDSNRLLEPMEYNISGSLRTAHISGLPPQ
TSFIIYLYGVTRGIRTQALRTTAVTEAEPEVDHLLVSDATPHGFRLSWTADEGAFDSFVL
KIRDSNRLLEPLEIIVPGHQRTQDIQGLKEGTEYYVELYGVISGRRSQPVNAIAMTAVGS
PKEISFSEITETSTVVSWKPPLTRVDSFRISYGPEPGDHFKSLTVDGNRSRIKLVDLIPG
IKYIVNVVAIKGFEESDPVSGSLVTELDSPSGLRVVNITDSKALAVWQPALAAVDKYLIS
YLAEGETEVTQRVSGNTMEYDLVGLRPATEYTLKIQAIKGPQKSRILSARFITGPDAPRS
LTASDVQFETAVLTWKPPQGSITGYLLIYESADGKIKEVVLGPESTSYSLADLSSSTLYK
AKLQALLHTLKSDFIQTTFTTTGLLYPYPKDCSQTLLNGEIASGLYTIYINGNQSQPVEV
YCDMSSDGGGWIVFLRRQNGEVDFYQNWRTYESGFGDPNHEFWLGLEKLHRITSQGPYEL
RVDLSDRDETAYALYNQFTVGDARTRYRLKVDGYSGNAGDSMNYHNGRSFSTFDKDNDSA
ITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGINWFHWKGHEHSIPFAEMKLRPSSFR
NLEGRQKRA
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggccctctccacgtgggtcgtggcctcggtggccatctttctcttccatcaagatgct
agcggtggactcatcaagagaatcattcggcagaagagggaaacgggaatcaatgtgaca
ctgccagaggataaccaacctgtggtcttcaaccacgtctacaacatcaatgtccctgtg
ggctccctttgctctgtagacttggattctcccagtggagactcagacttcaaagtcccg
tccgagccaggcaaacactatcaggagcacacactgaatgaagacaatcagattgtgttc
acgcaccgcatcaatatcccacgacgggcttgtggttgtgcggcggccccagatatcaag
gtgctactaagccgacttgaagaattggaagagctggtatcttctctgcaggaacagtgt
ggcagtgggtcagggtgctgttccagtcctcaaacggcgaaaggtaccattgatgctact
ccctactgcagcggacgaggaaactacagcaatgatatttgtggttgcatctgcgaacag
ggatggaaaggaccaaattgctctgaaccagaatgcccacagaactgcaacgagagaggc
cagtgcatcaatggccagtgtatttgtgattatggttacaccggctatgattgtggagag
ctggcctgtcctggggactgcaacgatcaaggcaaatgtgtggatgggaaatgtgtgtgc
ttcgatggttacgctggggatgactgcagctttgaggtctgcttggtgccctgcagtgag
tatggcaattgtgtgaatggacaatgcatctgcatggaaggtttcactggagtggactgc
agcaagtccctttgccttaacaactgcaataatcgggggcgctgtgtggaagaggagtgt
gtgtgtgatgaaggatacacaggtgaggactgcagtgagctcatttgccccaacgattgc
tatgaccggggtcgttgcatcaacggcacctgctactgtgaaactggattcactggtgag
gactgtggagacctggcctgtccaaatgattgtcatcacaatggtcgctgtgagaatggg
gtgtgcgtgtgcgatgaaggcttcttggggccagactgtggggaggtgaggtgtctcaat
gactgccacaaccagggccagtgtgtgaatggccagtgtgtgtgtgatgaagccttcatg
ggggaggattgtcgtgaactaagatgccccaaggattgcaacaaccatggccagtgtgtt
ggtgggaaatgtcagtgtgatgaggattacatgggggaggattgtggggatctgagatgc
cttcatgactgccacaatcgcggccagtgcatcaaagggcagtgtgtatgcgatgaaggc
tttgtgggggaggactgcagccagcgcaggtgtcccaacgattgccacaagcgagggaaa
tgtgtggatggccagtgtgtatgtgaagaagctttcactgggcttgattgcaatgaactg
cggtgccccaatgactgcaatgaccacggacgctgcgttgatgggcaatgcatatgtgat
gaagggtacactgctgaagactgctcagaactgacctgtccccaggactgcaaccgtcgt
ggacgttgtgtcaatggtgtctgtgaatgcaacgaaggcttccttggggaggactgtggg
gagctagcttgcatcaacaactgcaacaaccaaggccattgtctgaatggacagtgtgtc
tgtaatgagggcttcaccagtgtagactgtggccaacggaaatgccttgatgactgcaac
aacagaggacagtgcattgatggcgtgtgtctatgtgatgaaggatatgaaggccctgct
tgtgctggacagtcctgccccaacaactgcaatgatcttggtcgttgtgtagccgggcga
tgtgtctgtgaagaaggcttcataggtgctgactgttcagatgtatctcctccaaagaat
ttgatggtgaccgaagtgacagataaaaccattaacttggaatgggcaaatgaaaatgtt
gtcaatgaatatctcatcagctacattccgaccagcattgatggcttagaatttcagttc
cgggtacctggaaacaaaacatcagccaccatccgggagctggaacctggtgtggaatat
ttcatccgtgtttttgccatcctaaggaacaaaaaaagcatcccaattaatgcccgaatt
gctacttacttgcctgcccccgatggcttgaagttcaaatctgttaaagagacttccgtg
gaggttgaatgggatgcctttaatttccctttccatgggtgggagattatctttagaagc
atgaaagaggaagagaatggggccattcgaagcagcctgaagagccctcaaacaacctac
ctacaacaaggtcttgccccaggacaacagtacaatgtatctctggttgtcgtgaagaat
cagaccagaggacctgctgtgtcgagaatcgtgaccacaaaactggatgcccccagccag
attgaagcaaaggatgttaccgacactaccgccctcataacatggttcaggcccttagct
gagatagacggacttgagttgacttatgggcccaaggataccccaggagaccgcacttcc
attgacctctccgaagacgaaagccagtattccattggaaatctcaagccacacacggaa
tatgaggtgatcctcgtgtctcggcgtggactcatggcgagtgaccccatcactgaaaat
tttgtcacagatctggatgctccccaaaatctgaggcacgtttctcagacggaccgcact
atcacgctggagtgggaaaacagtcgagccatgccagatgtctacaggatcaaatacgcc
cctctctctggtggagaccacgctgaggtcacggtgccccgaagcaatcaggccacctcc
aaagttacactctctggcctgagaccgggaacagaatacggcattggagtaacttcagtg
aaagaggacaaagaaagttttccttccaccatcaatgctggaaccgatctagatagtccc
aaggacctggaggtcattgaccctactgaaactgcttttactttacgttggaagagacct
ctggccaaaattgaccgttaccgccttacttacaacacctctctggggaagaagaatgaa
attgagattccacctgatagcacatcctatatcctaaggtcactagattctgggacggaa
tacacgatcatcctcgtggctgaaaaaggcaggctcaagagtaagccttcaactgtcact
ggttctacagaagaagaacctgagctgggcaatttatcagttgcaaaagtctactgggat
ggattctacctcacctggacagcagctgatggtgcctatgagacttttgtcatacaggtg
cgggagtccaaccaaccggaagatacacaaactctcacccttccggggacacaacggtcg
ataaatctctccggactcttgccgaatactctttacacaatcaccatctatggaataact
cagggctaccaaacaaaacccatctttgttgaatctaccacaggggccaaacccgaagtt
ggaaacctgaccatttggggcgtgaccccggaaagcttcaacctctcgtggacgacctcc
cgaggaaactttgaactctttacccttgaaatcattgattccaacaggttgctggaaccc
atggaatacaacatttcaggcagtttaaggactgcccatatctcagggctgccccctcaa
accagtttcattatctacctctatggagtcactcgtggcatccgcacccaggcattaaga
acaactgccgtaacagaagccgaacctgaagtagatcaccttttggtatcggacgctacc
ccccacggtttccgcctgtcttggacagcggatgaaggagcctttgacagttttgtcctt
aaaatcagggattccaacaggcttttagaacctctggagataatcgtaccaggtcatcaa
cgaactcaggacatccaagggctgaaagaagggaccgaatattatgtagagctctacgga
gttatcagcggacggcgttcccagcccgtaaatgcaattgctatgacagcggtgggatcc
ccgaaggaaatctctttctcagaaattactgaaacttcaactgtggttagttggaagcct
cccttgacgcgagttgacagtttccgaatttcatacggtccagaacctggagaccacttc
aaatctttgaccgtggatggaaaccggagtagaatcaagctagtcgatctgatccctggc
ataaaatatatcgtcaatgttgtagctatcaaaggttttgaagaaagtgaccctgtttct
ggatctctagttacagaattggatagtccgtctgggctgagggtagtaaacatcacggac
tccaaagctttagctgtttggcaaccagcccttgccgctgtggacaaatatttgatatcc
tatcttgcagaaggagagacagaagtgacacaaagggtatctggcaataccatggaatat
gatctcgttggccttcgaccggctacggaatacaccctcaagattcaagccatcaaaggc
cctcagaaaagcaggattctctcggccagattcattacaggtcctgatgctcccagatct
ctgactgcttctgatgtccagtttgaaacagctgtcctcacatggaagccaccccagggg
tctatcacaggctaccttctgatctacgaatctgctgatggcaaaatcaaggaagtggtc
ctggggcccgaatctacttcatacagcttagcagacttgagttcctccactctatacaag
gcaaagctgcaggccctgctccacacattaaagagcgacttcatccaaaccacgttcacc
acaactggacttctctacccttaccccaaagactgctcccaaactctgctgaatggggaa
atagcttctggactgtacaccatctatatcaacggcaaccaatctcagcctgttgaagtg
tattgtgacatgagctctgacggaggcggatggattgtctttttgagaaggcagaacggc
gaagtggacttctaccagaattggaggacttacgagagtggttttggggatcccaatcat
gaattctggctagggctggagaagcttcaccgaatcacttcccaaggcccgtatgagctg
agggtggacctgagcgatcgcgacgagaccgcctatgctctctacaaccagttcaccgtg
ggggatgccaggacacgctatcggctgaaagtagatggctacagtggtaacgcaggtgat
tccatgaattaccacaatggacgctcgttctccacctttgacaaggacaatgactccgcc
atcacaaattgtgccttatcatacaaaggagcgttctggtacaaaaactgtcatcgagtc
aaccttatgggtcggtacggagacaacagtcacagccagggaatcaactggttccactgg
aaaggccacgagcattccattccatttgcggagatgaagctacggccttccagttttagg
aatttggaaggaaggcagaagagagcgtaa
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integrated database retrieval system
