Pseudonaja textilis (eastern brown snake): 113444037
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Entry
113444037 CDS
T09005
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113444037 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113444037 (EXOSC2)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113444037 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113444037 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
113444037
NCBI-ProteinID:
XP_026568383
Ensembl:
ENSPTXG00000014269
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MSTAQNIRPRDGSAPARRPSGVPSTKMAGVEFRLPAARKRLPSNLPWSSGGDRDLVAPGD
TITTDPGYMRGHGTYLGDEKLIASVAGVVERVNKLVCVKALKARYNGEVGDIVVGRITEV
QQKRWKVETNSRLESVLLLSSMNLPGGELRRRSAEDELAMRDFLQEGDLVSAEVQAVFSD
GAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHFHDLPCGASVILGNNGFIWIYPTPEQ
KEDEAGGFVANLEPVSLADREVISRLRNCIVALVSQKMSLYDTSILYCYEASLPHQIKDL
LKPEVVEEIVLETRQRLLELEG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcacagaacattaggccgcgcgatggttctgcgcctgcgcggcggccgtcc
ggtgtgccttcaaccaagatggcgggagtggagttcaggctccccgcagcgcggaagcgt
ttaccgtccaacctgccctggagcagcggcggggaccgggatttagtggcccccggggac
accatcaccacggacccgggttatatgcggggtcatggaacttacctgggggatgagaag
ctgattgcttcggtagctggagttgtcgagagagtgaacaaactggtgtgtgtcaaagca
ttaaaagccaggtacaatggtgaagttggagacattgtggttgggcgaattacagaggtt
caacagaaacgatggaaggtagagaccaactctagactagaatctgtgctgttgctctca
tccatgaatcttcccggtggagagttgagacgtcgatctgcagaagatgagttggccatg
agagatttcctccaagaaggagaccttgtcagcgctgaagtccaagcggtgttttccgac
ggggcggtctcgctgcacactcgaagcctcaaatacggaaagcttggccagggggtccta
gtccaggtctctccatccctggtgaaacgccagaaaactcacttccacgacttaccgtgt
ggggcctccgtcatccttggcaacaacggcttcatctggatttatcccacccctgagcag
aaagaggacgaggctgggggctttgtggctaacctggagccggtgtccctggctgaccgc
gaggtcatctcccgcctccgaaactgtatcgtggctctggtttcccagaagatgtctttg
tacgataccagcatcctttactgttacgaagcatcccttcctcaccagatcaaagacctt
ctcaaaccagaagtggtggaagagattgtgttggagacccgccagagactcttggaactg
gaaggatga
DBGET
integrated database retrieval system
