Pseudonaja textilis (eastern brown snake): 113444670
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Entry
113444670 CDS
T09005
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113444670 (COL13A1)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113444670 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113444670
NCBI-ProteinID:
XP_026569315
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MVVEEKSWQGVAPGRLETGLSLAPPRTGGDGERCCRVPLLLNSGLPGISFLSLVLSLLLY
FRTSDLQSRVSHLEADRSTPLPAACLSADQMETAILGRVDQLLAERINFNLPRHREARDI
YQRCNCPAGPPGPTGRPGLPGDKGTMGIRGQPGVKGPPGEKGAPGEAGMSIIGPRGPPGQ
PGTRGFPGFPGPIGLDGKPGQPGQKGEMGIPGQKGEKGQCGEYPHREYLSTTLAALRSNH
ILALKGEQGQAGSQGPPGLPGPPGPPGTPGPPGPMGPAGKTGESGKDGKGLPGPPGPKGD
SGLQGYHGRKGEVGEAGLPGTPGLPGSAGPKGEPGKPGAKGEHGISGKMGPPGLPGKRGY
RGPKGEPGKSEMVDYNGNINEALQEIRTLALMGPPGLPGIAGPAGPPGQKGEIGLPGPPG
RNGEKGLDGLNGVKGDPGMPGPPGLIGPIGLSGLTGEKGEPGEKGDIGISVTGPPGPQGP
PGNPGLQGLLGPKGEAGIDGLKGEKGIQGEKGDRGPLGLPGASGLDGRPGPPGTPGPAGV
PGPAGPKGERGNKGDSGSTGPIGSAGLPGFQGPPGEKGNRGERGKKGSRGPKGDKGDQGA
PGLDAPCPLGEDGLPIQGCWNK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagaagagaagagctggcaaggggttgctcctggtcgcttggagactggctta
agcctcgcgcctcccaggacgggaggagatggagaaagatgctgtagggtacctctgctg
ctgaactcggggctgcctgggatctctttcctttctctggtgctgagcctcttgctgtac
ttcaggacatcagatctgcagtccagggtttctcatttggaggcggacagatccactccg
ctcccggccgcctgcctctccgcagaccaaatggagacagctattttgggaagggttgac
caactgctcgctgagaggataaacttcaatttgccaagacatcgggaggctagagatatc
taccagagatgcaactgcccagcaggaccgcccggtcctacaggaagacctggccttccg
ggagacaaaggaaccatgggaatccgtgggcagccgggagtcaagggcccacctggagag
aagggagctccgggagaggctggcatgtccatcattggtcctcgtgggcctccaggacag
cctggaacaagaggttttcctgggtttccaggtccaattggtttggatggcaaaccagga
caacctggacagaaaggagaaatggggatcccaggacaaaaaggagaaaagggtcagtgc
ggagaatatccacacagggaatacctaagcaccacacttgcagctctgcgttctaatcac
atccttgcattgaagggtgaacaaggacaggcaggcagccaagggcctccagggctacct
gggcccccaggaccacccgggactccaggaccacctggcccaatgggcccagctgggaaa
accggagaatctggcaaggatggaaagggtttgccaggacctcctggaccaaagggtgac
tctggacttcaaggatatcatggaaggaagggtgaagtgggtgaggcaggcctaccagga
acacctggacttccaggatctgctggccctaagggtgaacccgggaaaccaggagcaaag
ggagaacatggaatttctgggaagatgggccccccaggtttgcctggaaaaagggggtac
aggggccccaagggtgaaccggggaagagtgaaatggtagactacaatggcaatatcaat
gaagctttacaggagatacgaacattggccctcatgggacctcctggtcttccaggcatt
gcaggaccagctggaccgcctggacagaagggtgaaattggcttgccaggtcctccagga
cgcaatggagaaaagggtcttgatggcctaaatggagttaaaggtgacccaggaatgcct
ggacctcctggtctcatcggtccaattggactttcaggattgacaggagagaagggagaa
cctggagaaaaaggagatatcgggatttcagtaactggtccaccagggcctcaaggcccg
cctggaaacccaggtcttcaagggctactgggacctaagggagaagcaggaattgatgga
ttaaaaggtgaaaagggtatccaaggagaaaaaggagatcggggtcctctggggctgccc
ggcgcttcaggtttagacggcaggcctggcccaccgggtactccaggaccagcaggtgtc
ccaggaccagcaggaccgaaaggagagaggggaaataagggagattctggttctacaggc
ccgataggatcagcaggccttcccggctttcaaggaccaccgggtgaaaaaggaaatcgg
ggggaaaggggcaagaaaggctctagggggcctaaaggggataagggagaccaaggagca
cctggattagacgcaccttgtccattgggggaagatggattgccaattcaaggatgctgg
aataagtga
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