KEGG   Pseudonaja textilis (eastern brown snake): 113444846
Entry
113444846         CDS       T09005                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510  Focal adhesion
ptex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113444846 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113444846 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ptex00536]
    113444846 (COL2A1)
Glycosaminoglycan binding proteins [BR:ptex00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113444846 (COL2A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 113444846
NCBI-ProteinID: XP_026569529
LinkDB
Position
Unknown
AA seq 1492 aa
MFSFLDSRTLMLLAATQVILLAVVNCQNEDIQEEGSCVQDGQRYSDKDVWKPEPCQICVC
DTGTVLCDDILCEEMRDCPRPEIPFGECCPICPTDQPTASGCNILQGQKGEPGDIKDVVG
PRGPPGPQGPSGEQGARGERGDKGEKGVPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGG
NFAAQMAGGFDEKAGGGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGSPGEPGEPGS
VGAMGPRGPPGPPGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGYPGL
DGSKGEAGAPGAKGEAGSSGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGP
PGPVGPSGGPGFPGAPGAKGEAGPTGARGPEGAQGSRGESGSPGSPGPAGPPGNPGNDGI
PGAKGSAGGPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGEPGP
AGPQGAPGPAGEEGKRGGRGEPGAAGPSGPPGERGSPGNRGFPGQDGLAGPKGAPGERGP
PGLGGPKGAPGDPGRPGEPGLPGARGLTGRPGDAGAQGKVGPSGAPGEDGRPGPPGPQGA
RGQPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGAVGERGE
QGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGPAGAQGL
SGARGLPGTPGTDGPKGAAGPAGPPGAQGPPGLQGMPGERGAGGIPGPKGDRGDAGEKGP
EGAPGKDGSRGLSGPIGPTGPAGPSGEKGETGPAGPSGAAGARGAPGERGETGPPGPAGF
AGPPGADGQPGAKGEQGESGQKGDAGSPGPQGPSGAPGPQGPVGVTGPKGARGAQGPAGA
TGFPGAAGRVGPPGPNGNPGPPGLPGPSGKDGPKGARGDAGPVGRTGDAGLQGPPGPSGE
KGEPGEDGPPGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGSPGGPGD
RGPPGPVGPPGLTGPSGEPGREGNPGSDGPPGRDGSPGPKGERGEPGPVGSHGAPGSPGA
PGPVGPTGKQGDRGETGPQGPIGPTGLAGARGLPGIQGPRGDKGEAGEAGERGLKGHRGF
TGLQGLPGPPGPPGDLGTPGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGE
TGPAGPPGNPGPPGPPGPPGAGIDMSAFAGLGQTEKGPDPMRYMRSDQAFSNLQQHDVEV
DATLKNLNNQIESIRNPEGSKKNPARTCRDLKLCHPDWKSGDYWIDPNQGCTLDAIKVFC
NMETGESCVYPKPKSIPRKNWWTSKNKEKKHIWFGESINGGFHFSYGDDSLAPNTANIQM
TFLRLLSSEGSQNLTYHCKNSVAYMEAASGNLKKALLIQGSNDVEMRAEGNSRFTYTALQ
DGCTKHTGKWGKTIIEYRSQKTSRLPIIDIAPMDIGGADQEFGVDIGPVCFL
NT seq 4479 nt   +upstreamnt  +downstreamnt
atgttcagctttctggattcaaggactctaatgctcctggcagctactcaagtaatttta
ttagcagttgtcaattgtcagaatgaggatatacaggaggaaggcagctgtgtacaggat
gggcagagatatagtgataaagatgtgtggaaacctgaaccgtgccagatctgtgtttgt
gacactggcactgtcctctgcgacgatattctctgcgaagaaatgagagactgtcccagg
cctgagatacccttcggagaatgttgccctatatgtccaactgatcagcccaccgccagt
ggttgtaatattttgcagggtcaaaagggagaacctggtgatatcaaggatgttgtagga
ccgagaggccctcctggaccacagggaccttcaggtgaacaaggagcaaggggagaacgt
ggagataaaggagaaaagggtgttccgggtccacgtggcagagatggtgaacctggtaca
cctggcaatccagggccccctggacctccaggacctccaggcccccctggccttggtgga
aactttgctgctcagatggctggtggatttgatgagaaagcaggcggcgggggtgctcag
atgggagtgatgcaaggacctatgggaccaatggggccacggggtcctccaggaccatca
ggatctcctggccctcaaggatttcaaggcagccctggagaacccggagaacctggttct
gtgggtgcaatgggtccccgtgggccacctggaccacccggaaaacctggagatgatggt
gaagcaggaaaacctggcaaatcaggagagcgtggattacctggacctcagggtgctcga
ggtttccctgggaccccaggtcttcctggtgtcaaaggtcatagaggatatcctggttta
gatggctctaaaggagaggctggtgctccaggtgctaagggtgaagctggatcttctggg
gagaatggttctcctggtcctatgggtccccgtggccttccaggtgaaagaggacgccct
ggcccatctggtgctgctggtgctcgtggtaatgatggtctccctggtccagctggtcca
ccgggacctgttggcccttctggtggcccagggtttccaggagctccaggtgcaaagggt
gaagctggtcccactggtgctcgtggccctgagggtgcccaaggctctcgaggtgaatct
ggatcccctggttctccgggacctgcaggacctccaggaaaccctggaaatgacgggatc
cctggtgccaaaggatcagcaggtggtcctggcattgctggtgctcctggttttcctggc
ccacgtggaccacctgggccacaaggtgcaacaggacctttgggtcccaaaggtcaggcg
ggagagccaggaattgcaggcttcaaaggtgaacaaggccccaagggtgaacctggccct
gcgggaccacaaggagcccctggcccagccggcgaagaagggaagagaggaggtcgtggt
gagccaggagctgcaggaccaagtggaccacctggagaaaggggttcccccggaaatcgt
ggttttcctggtcaggatggattagctggccccaagggtgctcctggagaacgcggccct
cctggccttgggggaccaaaaggtgcccctggagatcctggacgacctggggaacctggc
ctgcctggtgcccggggcctcactggtcgtcctggagatgctggtgctcaaggcaaagtt
ggtccatctggtgctccgggtgaagatggacgaccaggcccacctggtcctcaaggggct
cgtggtcagcctggggtcatgggtttcccaggccccaaaggtgctaatggtgaagctggt
aaagctggtgagaaggggctacctggtgctcctggattacgaggtcttcctggcaaagat
ggtgagacaggagcagctggaccaccaggacctgctggggctgttggagagagaggtgaa
cagggtgcgcctggaccatctggattccaaggactcccaggccccccaggccctccaggt
gaaggtggaaaaccaggtgaccaaggtgttcccggagaagctggtgctcctggtcttgtt
ggtcccagaggtgaacgcggcttcccaggagaacgtggacctgcaggtgcccaaggcttg
agtggtgctcgagggcttcccggcacccctggtactgatggacccaagggtgcagctggt
cctgctgggcctcctggagcccaaggccccccaggtctgcagggaatgcctggagagaga
ggagctggaggtattcctggaccaaagggagacaggggtgatgctggtgagaaaggccca
gaaggtgctcctggcaaagatggcagccgaggcttgagtggtcccattggtcctactggt
cctgctggccctagcggagagaagggtgaaacaggccccgctggcccaagtggagctgcc
ggtgctcgtggtgcccctggtgagcgtggagaaaccgggcctcctggccctgctgggttc
gctggcccccctggtgctgatggccagcctggtgctaaaggcgagcaaggtgaatctggc
cagaaaggagatgctgggtctcctggtccacaagggccatctggtgctcccggtccacag
ggtccagttggcgtgacaggtccaaaaggagctcgtggtgcacaaggacccgcaggagcc
actggattccccggtgcagcaggacgggttggaccaccaggtcccaatggtaaccctggt
cccccaggcctacctggtccttctggaaaagacggtcccaagggtgcccgtggtgacgca
gggccagttggacgtactggtgatgccggtttgcaaggccctcctggtccttcaggcgag
aagggagaacctggagaagatggcccccctggtgcagatggcccacctggacctcagggt
ttggcaggtcagagaggaatagttggtcttcccggtcagcgaggtgaaagaggctttcct
ggcctgcctgggccttctggtgagcctggtaaacaaggatctcctggaggtcccggagat
agaggcccacctggcccagttggtccacccggtttgactggtccctctggtgaaccaggc
cgtgagggtaatcctggttcagatggtcctccaggcagagatggttccccgggaccgaag
ggtgaacgtggtgagcccggtcctgttggaagtcatggtgctcctggctcacctggtgct
ccaggtcctgttggtccaactggcaaacaaggagacagaggtgaaacaggtcctcaaggt
cctattggccctactggtcttgcaggagcaaggggcttacctggtatacaaggtcctcgt
ggcgacaaaggtgaagctggagaggcaggagaacgaggtctgaagggtcaccgaggattc
accggcctgcagggtctccctgggcctcctggtcctcctggagatctaggtacacctggt
cctgccggtccctctggtcccaggggtcccccaggccctgttggtccttccggcaaagat
ggctctaatggaattcctgggcctattggtcctcccggtcctcgtggtcgcagtggagaa
actggtccagctggtcctcctggcaaccctggcccccctggccctcctggcccccctgga
gctgggattgatatgtccgccttcgctggcctcggccagactgagaaaggccctgatcca
atgcgctacatgcgatctgatcaggctttcagcaacctgcaacagcatgacgttgaagtc
gatgccaccctgaagaatctcaacaaccagattgaaagcatccgaaaccctgagggcagt
aagaagaacccagctcgaacctgtcgcgatctgaaactatgccatcctgactggaagagc
ggtgattattggattgaccccaaccagggctgcactttggatgccataaaagttttctgc
aacatggagactggcgagtcctgtgtctatccgaagccaaagagcattcccaggaagaat
tggtggacaagcaaaaacaaggagaaaaagcacatctggtttggagaaagcatcaatgga
ggatttcactttagctacggggatgacagcttggctcctaacactgccaacatccagatg
actttcctgcggctcctgtcttccgaaggctcacaaaatctcacctaccactgcaagaac
agtgttgcctacatggaggcagcatccggcaaccttaagaaagctctcctgatacaggga
tctaatgatgtggagatgagagctgagggcaacagcaggtttacctacaccgccttgcag
gatggatgtactaaacacaccggcaagtgggggaagacaatcatcgagtatcgatctcag
aagacttcacgcctgcccatcattgacattgcgcctatggacattggtggtgccgatcag
gaatttggtgttgacattggccccgtgtgctttttgtaa

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