Pseudonaja textilis (eastern brown snake): 113445115
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Entry
113445115 CDS
T09005
Symbol
DDX28
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptex03009
]
113445115 (DDX28)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113445115 (DDX28)
Ribosome biogenesis [BR:
ptex03009
]
Eukaryotic type
Other ribosome biogenesis factors
113445115 (DDX28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113445115
NCBI-ProteinID:
XP_026569908
Ensembl:
ENSPTXG00000006085
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MALLLSLWGIRGPATAARFPSWRPPAVRGWPVRRASGASPPDEHVVRIPHAWKLRLERPA
SKRERCRNPETESGASFGEKLLLRSRRRELSQAARHTTGRLERPRLVSDGWKHRLSRGDY
FQLERTRKEPTRETSDGDAPSTFLELGLEPRVAASLQDVLGISRPTPVQLRTIPALLKGG
HALCGAETGSGKTLAYLLPLFQRLLQAPTFPGDNVSGTSPRSLVVVPSRELAGQVRRVAA
LLADPLDLQVKEIGGGRGTAVIRRRIHEGPSDLLIATPGALSKVLKRKMLSLEKLLFLVL
DEVDTLLDASFIDLVKDIVQHAFLKDVVQQTFLDPKFEDRDEAWDPKAQLVAMGATLPKG
LSQMLSESADLSNFTVLTGSSLHCLQPHVEQRFIRLKGGEKVAELLQLLKERGSSSGAVI
IFCNKARTVNWLGYILEDHNINHLRLQGEIAADTRAGIFKAFQRGESDILLCTDIASRGL
DTIHVELVINYDFPLTLPDYLHRVGRVGRIGSKFLGTAVSFVTHKWDVDLVRKIETAARK
RSPLPGLDIVVKESLHPKKKF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctcctctcgctttgggggattcgtggccccgcgacggccgcccggttcccc
tcttggcggccgccggccgtgcgcggctggccggtgcgccgagcctccggagcgtccccg
cccgacgagcacgtggtgcggatcccccacgcttggaagttgaggctggagcggccggcg
tccaagcgggagcgatgcaggaaccccgagacggagagcggcgcttccttcggggaaaag
ctgctgctgcggagccggagacgagagctgagccaggcggcccggcatacgacgggccgc
ctggagaggccgcgcttggtgtcggacggctggaagcaccgcttgtcccgcggggattat
ttccagctggagcggacgcggaaggagcctacccgggagacgagcgatggggacgccccg
tccaccttcctcgagctggggctggagcctcgcgtggcggcctccttgcaggacgtgctg
ggcatctcgcggcccacgccggtgcaactgcgcaccatcccggccctgctgaaggggggc
cacgcgctgtgcggggcggaaactggcagcggcaaaaccctggcctacctgctgcctctc
ttccagcggctcttgcaggccccgacgttccctggggacaacgtttccgggacctctccg
cgctctttggtggtggtgccctcccgagaactggcagggcaggtgcgcagagtggccgcc
ctcttggctgaccctttggacttgcaggtgaaggagatcggcggtggccggggcacggct
gtgattcggcggcggatccatgagggtcccagtgacctcctgatcgccacgccaggcgcc
ctgagcaaagtcctgaagaggaagatgttgtccttggagaaattgctcttcttggtgttg
gatgaagtggacactctcctggatgcctcattcatagatctggtgaaggatatagttcag
catgcttttttgaaggatgtcgttcagcaaactttcctggacccaaagtttgaagacagg
gatgaggcttgggatcccaaagcccagctggtagcgatgggcgctactcttccaaaaggg
ttaagtcagatgttgagtgaatctgccgatctctccaatttcaccgtattgactggctcc
agtttgcattgtcttcagcctcacgtggagcaaagattcatacgtttgaaagggggtgaa
aaagtagcagagctgctacaactcctcaaagagcgaggatcctcttctggagctgttatt
attttctgcaacaaagccaggactgttaactggctgggttacattttagaagaccataac
atcaatcatttacgcctgcagggagaaatagcagcagatacacgagcaggcatatttaag
gcctttcagagaggcgaatctgacattttgttgtgtactgatatagcttcccgtggattg
gacaccattcatgtagagcttgtaattaattatgacttccctttaacattgccagattat
ctgcatcgggtggggcgagtcggtcggatcggcagtaaattccttgggactgcggtcagt
tttgtaacccataagtgggatgtagatcttgttcggaaaatagaaacggcagctcgcaaa
agaagtccactcccagggctagatatagttgtgaaggagtctttgcatccaaagaagaaa
ttctga
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