Pseudonaja textilis (eastern brown snake): 113446019
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Entry
113446019 CDS
T09005
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113446019 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113446019 (EXOSC5)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113446019 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113446019
NCBI-ProteinID:
XP_026571226
Ensembl:
ENSPTXG00000019047
UniProt:
A0A670ZY27
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MESDQRRFDSGDLPSLRRIVCEQGPISRPDGSVSWMQGDTSVLVGVYGPTEVKVSKEIYD
KATLEVLLRPKVGLPGVYEKSREQMIKKTCEAVILGNLHPRSSITVVLQVITDAGSLLSS
CLNAACVGLVDAGLPMSSLFCGVTCALDADGNILLDPTAKQEKDAPAVLTFAIDSVEKKI
LLSTMKGACSEEQLQQCIATAQRAAETIFRFYRDAACRKYSKW
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaccagcggcgcttcgactccggcgatctgccgtctctgcgccggatcgtg
tgcgagcaagggcccatctcccgtcccgacggctccgtctcttggatgcagggggatacc
tctgtgttagttggggtgtatggacccacagaagtgaaggtcagcaaggaaatctacgat
aaagcaactctggaggtgctgctaaggccgaaagtgggcctcccaggggtctacgaaaaa
agccgagaacagatgatcaagaagacttgtgaggcggtgattttgggcaacctgcatccg
cggtcctctattacggttgttctccaggtgattacagatgccggatctctgctctccagc
tgtttgaatgccgcctgtgtggggttggtggacgcaggactgcccatgagctccctcttc
tgtggagtgacctgcgccttggacgccgatggaaacatcctcctggaccccaccgccaag
caggaaaaggatgcccctgcggtgttgaccttcgccatcgatagcgtggagaagaaaatc
ctactctccaccatgaagggggcgtgttccgaagaacagcttcagcaatgcattgccacc
gcgcagcgagcggccgaaaccatcttccgcttctaccgagacgccgcatgcaggaagtac
tcaaaatggtga
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