Pseudonaja textilis (eastern brown snake): 113446717
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Entry
113446717 CDS
T09005
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04120
Ubiquitin mediated proteolysis
ptex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113446717 (SYVN1)
04120 Ubiquitin mediated proteolysis
113446717 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptex04121
]
113446717 (SYVN1)
Enzymes [BR:
ptex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113446717 (SYVN1)
Ubiquitin system [BR:
ptex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113446717 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_5
zf-HC5HC2H
FAR1_N
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
113446717
NCBI-ProteinID:
XP_026572277
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MFRTAIMMAASLALTSAVIAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMVLLAILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTVFIKYLLHSIDLQSENPWDNKAVFMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQPPPEQPEGGQHPPPHQA
PLMPQAPNFPQGLLPPFPPGMFPLWPPMAPFPPVPGVQPPNNADGASAGPPPGSQGAGTA
RPTGDSASTSDTATTAGTVPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFSGLTEEELRAM
EGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLSTIGMPRAAPAPPSASAPPMAPPE
TPTSPESNSSEATTSTSQPADSTSSPDTSPDKAEGSTQPSSHDGDPSSPEEPNAAELRRR
RLQKLELPPPASH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttccggactgccatcatgatggctgccagcctggccttaacctccgccgtgatagct
cacgcctattacctgaagcaccagttctaccccaccgtggtgtaccttaccaagtcgagt
cccagcatggcggtcctgtacattcaggcttttgtcttggtattcctgctcggcaaattt
atgggcaaagtgtttttcggacaactccgagcggcagaaatggagcatctgctggagcgc
tcgtggtacgccgtgaccgagacctgcctggcctttaccgtcttcagggatgacttcagt
cctcgttttgtggctctcttcaccctcctcctcttcctcaagtgcttccattggctggct
gaagaccgggtggactttatggagagaagtcccaacatatcttggttgttccatttccgc
attgtctctctcatggtgcttctggccatcctagatttcctgtttgtcagccacgcttac
cacagcatcctgacccggggggcttccgtccagctggtctttggctttgagtacgccatc
ctcatgacgatggtgctgacggtcttcatcaaataccttctgcattccatcgacctccag
agtgaaaacccctgggacaacaaggccgtcttcatgctctatacagaactcttcacgggt
ttcatcaaggtccttctgtacatggccttcatgaccattatgatcaaagtgcacaccttc
cctcttttcgccatccggcctatgtacctggcaatgaggcagttcaaaaaggcggtcacg
gatgcgatcatgtctcgccgagcgatccgcaacatgaacacgctgtaccccgatgccacc
ccagaagaactgcaggccatggacaatgtatgcatcatctgccgggaagagatggtgatg
ggtgcgaaacgtctgccgtgcaatcacatattccataccagctgcctccgatcctggttt
cagcgccagcagacctgccccacctgccggatggacgtcctgcgcgcctccctgcccacc
cagtcgcagccgccccccgagcagccggaaggagggcagcatccgcccccccaccaggcc
cccttgatgcctcaggcgcccaacttcccccaaggcctcctgcctccgtttcctcccggg
atgttccctttgtggccccccatggctccctttcctccggtgccgggcgtccagcccccc
aacaatgccgacggtgcctccgcggggcccccgccaggatcccaaggggcaggcaccgcc
aggcccacgggggattcggccagcacgtcggacaccgccaccaccgcagggaccgtgccg
ggtttccccttccctcccccttggatggggatgccgttcccccctctctttgggttccct
ccgatgcccgttcccccctcggggttttccgggctgacggaagaggagctgcgggccatg
gaaggccacgaacggcaacacttggaggcccggctgcagtgcctgcagaacatccacacc
ctcctggacgcggccatgctccagatcaaccagtatctcactgtgctgtctacgattggg
atgcctcgagctgctccagcgccccctagtgcttcggcccctccaatggcccctcctgag
accccgactagccctgaatcgaattccagtgaagccaccacctccacctcccagccggcg
gacagcacctcttcaccagatacgtccccagacaaagcagagggatccacgcagccctcc
agccacgacggggacccctcctccccggaagagcccaacgcagctgagctgcggagacgc
cgacttcaaaaactagaactgcctcctcctgcctctcattga
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