Pseudonaja textilis (eastern brown snake): 113447049
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Entry
113447049 CDS
T09005
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03082
ATP-dependent chromatin remodeling
ptex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113447049 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113447049 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptex01009
]
113447049 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptex03021
]
113447049 (SMARCB1)
03036 Chromosome and associated proteins [BR:
ptex03036
]
113447049 (SMARCB1)
Protein phosphatases and associated proteins [BR:
ptex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113447049 (SMARCB1)
Transcription machinery [BR:
ptex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113447049 (SMARCB1)
SWI/SNF complex
113447049 (SMARCB1)
Chromosome and associated proteins [BR:
ptex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113447049 (SMARCB1)
PBAF complex
113447049 (SMARCB1)
SWI/SNF complex
113447049 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
113447049
NCBI-ProteinID:
XP_026572822
Ensembl:
ENSPTXG00000018573
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHESQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRLGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFRSNSAGGGSPYRIENPLPTVEIAIRNTGDAD
QWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgacttctacatgatcggctctgaggtgggcaactacctgcggatgttccgc
ggctccctctacaagcgctacccgtcgctctggaggcgcctggcgacggtggaggagcgc
aagaagatcgtcgcctcgtcccacgagtcgcagcggagccacagcccgaggagatatcat
ggctataccaccctggccaccagtgtgactctcttaaaagcttctgaagttgaagaaatc
ctggatggaaacgatgagaagtacaaagccgtctccatcagcactgaacctcccacttac
cttagggaacagaaggccaaaagaaacagccagtgggttccaactcttcccaatagctcc
catcatctcgatgctgtgccctgttcaaccaccattaacagaaaccgcctgggacgagac
aagaagagaacgttcccgctctgctttgatgaccatgacccagcagtgatccacgaaaat
gcctcacaaccagaggtgctggtcccaatccggctggacatggaaatcgatgggcagaaa
ctgagagatgcttttacgtggaatatgaatgaaaaactgatgactccagaaatgttttcg
gagattctctgcgatgacttggatttgaatcccctcacttttgttcctgcgatcgcatct
gcaatccgacagcaaatcgagtcgtaccctaccgacagcatcttggaggaccagtcagat
cagcgggtcatcattaagctcaacattcatgtcgggaacatctccttggtggaccagttt
gagtgggatatgtctgagaaggagaattcccccgagaagtttgccctgaagttgtgctcg
gagctcggactgggcggtgagttcgtcaccaccatcgcttacagcatccgggggcagctg
agctggcatcagaagacgtacgccttcagatccaattctgctggaggtggcagtccctat
aggattgagaaccccctgccgaccgtggagatcgccatccgtaacaccggggatgccgac
cagtggtgccctctgcttgaaaccctcacggatgcagagatggagaagaagatccgagac
caagaccggaatacaaggcgcatgaggcgtttagccaacacggctccagcctggtaa
DBGET
integrated database retrieval system
