Pseudonaja textilis (eastern brown snake): 113447309
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Entry
113447309 CDS
T09005
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113447309 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptex03021
]
113447309 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ptex03036
]
113447309 (SMARCC2)
Transcription machinery [BR:
ptex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113447309 (SMARCC2)
Chromosome and associated proteins [BR:
ptex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113447309 (SMARCC2)
PBAF complex
113447309 (SMARCC2)
GBAF(ncBAF) complex
113447309 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
SUIM_assoc
CD99L2
Motif
Other DBs
NCBI-GeneID:
113447309
NCBI-ProteinID:
XP_026573197
Ensembl:
ENSPTXG00000007606
UniProt:
A0A670YFN6
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSTRVWLGKNYKKYIQAEPPTNKSLSNLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKGGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIYLHPDIDPKLQAKLKDIVKRHQGTITEDKSNASHIAFP
VPGSLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEPEDENMEAAGKDEEENNAGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDSDTKTGRKGKEIEDLVTETVKGKPELQTTASQQMLNFPDKSKEKP
PDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKMTGKADPAFGLESSGIAGTTSDELE
RIGEGGERGAFRASTREAPSLDLAQYAVGTKKGAETQENRAGLASGLELTLNRLAQEENC
PDENRSESQPSEEKKELKEQREGVLEEEAKEKLGEVPRKEDDKSKEADSEKEMEKSDGDT
LADGEKEKEPKDGQEEGPKDLAEAEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHME
QLKYAEMRARQQHFQQMHQQQQQQQQPPPPPALSVGSQPLPSSGAPLAPTAHSMPISQTA
VPAASTVGPPSSMAQAEQMGQSVSVQSQQPATGTSQTAPSQAGQPSAASHAQPPYPSQQP
SSQILPGAVPASVHPAMAGNIPSALPFGMPASIPFSMASNVTDSIGINFPANTPIHPVHG
NLACSMANPPVINVSSALHPSATPLPHGSAAAQSPAIVAAMQGNLLPSAGLGSDQGPSLP
PDSITPSPSTATPVPPSQ
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gttagtcagttcgacagcacgcgggtctggctgggcaagaactacaagaagtacattcaa
gcagaaccccctaccaataaatcattatccaacctagtggtacagctgctgcagttccaa
gaggaggtatttgggaaacatgtcagcaatgcaccactcacaaagttaccaattaaatgc
ttcttagatttcaaaggtggtggtgccctatgtcacattcttgcagcagcttataaattt
aagagtgaccaaggatggcgacgttttgatttccagaatccctcacggatggaccgaaat
gtggagatgtttatgactattgaaaaatctctggtacagaacaattgtctgtcccgtcct
aacatttatctgcacccagatattgaccccaaattgcaagccaagctgaaagacattgtc
aaacgacatcagggaaccataactgaagataagagcaatgcctcccatattgccttccct
gttcctggtagcttggaagaagaagaatgggttcgtccaatcatgaagagagacaaacaa
gttcttcttcactggggctactatcctgacagctatgatacttggattccagccagtgaa
attgaagcccctgtggaggatgctcccacaccagagaaaccccgtaaggttcatgcaaag
tggatcctagacacagacactttcaatgaatggatgaatgaagaagactatgaggtcaat
gatgagaagagccctgtctccaggagaaagaaaatctctgccaagactctcactgatgag
gtcaacagtcctgattcagacagaagggataagaaaggtggaaactataaaaaacggaaa
cgctccccttctccttcccctactccagaagcaaagaagaaaaatgccaagaaagggcct
tccacaccgtacaccaagtccaaacgtggtcaccgtgaggaagaacaagaagatcttaca
aaagacatggatgaaccttctcctgtccctaatgttgaagaggtgacgctgcccaaaaca
gtcaatacaaagaaagattctgaatctgctcctgtgaaaggcggcaccatgactgatttg
gacgaaccagaggatgagaacatggaggcggcaggcaaggatgaagaggagaataatgct
gggaacaaaggagagcagaccaagaaccctgacctgcatgaagacaacgtgaccgagcag
acccatcacattatcatccccagttatgcagcctggttcgactacaacagtgtccatgcc
attgagaggagagccctccctgagtttttcaacggcaagaataagtccaagacaccagaa
atctacttggcttaccgcaatttcatgattgacacataccggctcaatcctcaggaatac
ctgacttccactgcatgtcgtcgaaatctggctggtgatgtctgtgccatcatgagagtc
catgccttcctggaacagtggggactcatcaattaccaagtagatgctgagagtcgacca
acaccgatgggaccaccgcccacttctcatttccatgttctggctgacaccccttcggga
ctggtgccactgcagcccaaaacaccccagggtcgtcagagtgatagcgataccaagact
ggacgaaagggcaaagagattgaagaccttgtcacagagacagtgaaagggaaaccggag
ctgcaaaccacagcttcccagcagatgttaaacttcccagacaagagcaaggagaagcca
ccagatatgcaaaactttggactccgcactgacatgtacacgaaaaagaatgttccttct
aagagcaaagctgctgccagtgctactcgtgaatggacagaacaggagaccctgttgctg
ctggaggccctggagatgtacaaggatgactggaacaaagtgtccgagcatgttggcagt
cgtactcaggatgaatgcattctgcacttcctgcgtcttcccattgaagatccttacctg
gaggattctgaagcctctcttggacccctggcctaccaaccgatccccttcagccagtca
ggcaaccctgttatgagcacagtggccttcctggcttcagtggtggatccccgcgtggca
tctgcagcagccaagtcagccttagaggaattctccaagatgaaggaggaggtgcctaca
gccctggtagaagctcatgttcgcaaagtggaagaagctgctaagatgacaggcaaggca
gacccggcatttggtctggagagcagcggaattgcggggaccacgtccgatgagctggag
agaataggtgaggggggcgagcggggcgccttccgcgcttcaacccgtgaagcgccctcg
ttggacctcgcccagtatgcggtggggactaagaagggggccgagacgcaagagaacaga
gctggcctggcttccggcctggagctcacactcaatcgcctggcacaggaagagaactgc
ccagatgaaaaccggtcagaatctcaaccatctgaagagaagaaggagttgaaggaacaa
agggaaggagttctcgaggaagaagctaaggagaaacttggagaggtgcctaggaaagag
gatgataaaagcaaggaggctgacagtgaaaaagaaatggagaagagtgatggggacact
ttggctgatggagaaaaggaaaaagagccaaaggatggccaggaagagggacccaaggac
cttgcagaagccgagggtgagcggaagaccaaggtggagagggacatcggtgaaggtaac
ctctctactgcagcagctgctgctttggctgccgcagcagtaaaggcgaagcatttggca
gcagtagaggaacgtaaaatcaagtcgcttgttgctttgctggtggaaacccagatgaag
aagcttgagatcaaattgaggcactttgaagagctggagaccatcatggatcgggagcgc
gaggcattggagtaccagaggcagcagcttctggctgatcgtcaggctttccatatggag
cagttgaagtatgccgaaatgcgtgctcgccagcagcattttcagcaaatgcaccagcag
cagcagcagcaacagcagccaccgccaccgccagcgctgtctgtgggatcacagcccctt
ccttcttcaggagctcctctggcacctaccgctcactccatgcccatctcccaaacagcc
gttccagctgccagcacagtaggaccgccaagcagtatggcccaagctgaacagatgggg
cagtctgtgtcagttcagtcacagcagccggcaactggcacttctcagactgctccaagt
caggcgggacagccttccgcagcttcccatgcccagcctccgtaccccagccaacaacca
tcatcccagattctcccgggggcggtcccagcaagcgttcaccccgccatggctggtaat
atcccctcagctctgccttttggaatgcctgcctccatcccatttagcatggctagtaac
gtaacagactccatcggcattaacttccctgctaacacgcccatccatccagtgcatggt
aaccttgcgtgcagcatggctaatccgcccgtcatcaacgtctctagcgccctgcatcct
tctgccacccctctgcctcatggttctgcggctgcccagagcccagctattgtggcagca
atgcagggcaaccttcttccaagtgctggtcttggatcagatcaaggaccttcactgcca
ccggattctatcactcccagccccagcacagctacgccagtcccaccctcacaatga
DBGET
integrated database retrieval system
