Pseudonaja textilis (eastern brown snake): 113447415
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Entry
113447415 CDS
T09005
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03013
Nucleocytoplasmic transport
ptex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113447415 (CASC3)
03015 mRNA surveillance pathway
113447415 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113447415 (CASC3)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113447415 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
113447415
NCBI-ProteinID:
XP_026573411
Ensembl:
ENSPTXG00000008511
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MADRRRQRASQDSSEEDESDSPPGSAGSSPHSGSHRFGLPVAASTAGATPTPENVEAPVA
VGGSPADSECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEETSKMDLKRDRNDTELRTK
ADKADEKPESKGTVAGERQSGDGQESTEQVENKIGKKLPKHLDDDEDRKNPAYIPRKGLF
FEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAH
NPDDIKPRRVRKPRFGSPPQRESNWSSERPSKPPRHQSLDSTSVAPRTFINRNSAGTGRM
ASPRAFPKPSGYKDTRPSYRAVDVSSQHAPRFNEQSKPESSYRARRSDPIPAREPSPKSE
IPPIQNSPVKKEEVVLENQTPPADILQTQPDRPVEKKSYSRARRSRNKVGETGKLADEVP
PPSGLMPAPLKSADIIPSPSSAKTGNWEVPVEANLDGLEQDMTQLNMTEQNWNQGQPQFI
PPQGLPNQMHIGAAPPPQFNRIEDMGVQGGRAKRYSSQRQRPVPEPAPPVHISIMEGHYY
DALQFQGPIYTHGENPTSLPPQGVIVQPEMHLSHPGLHPHQTPAPLANAGLYPPPVSMPP
GQQPPPPPPPQQLLAPTYFPPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQAQSQVYGG
VTYYNTVQQQVQPKPSPPRRASQPVTIKPPPPETDLQFLLGKSVGVGKISPQEIVISLQR
SAVGKGLHTISSKAILMKEFCSFPPSHFYLGWQK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtaggaggcagcgcgcttcgcaggacagcagcgaagaggatgagtccgat
tcgccgcctggaagcgcaggttcttccccgcacagcggcagtcaccgctttggcttaccc
gtagcggcaagcaccgccggtgctactcctactcctgaaaatgtagaggcgccggtggcg
gttggaggtagcccggccgactcggagtgtgaaagtgaagatggcatagaaggagatgct
gttctctctgactatgaaagtgctgaggattctgaggctgaggaaggagaatacagtgaa
gaagaaactagtaaaatggacttaaagcgggacagaaatgacactgaattgagaacaaaa
gcagacaaagcggatgagaaaccagaatcaaaaggcacagttgcaggtgaaaggcagagt
ggggatggacaggaaagcactgaacaagttgaaaacaaaattggtaaaaaacttcctaag
catctagacgatgatgaagaccggaagaacccagcatatatacctcgtaaaggtcttttc
tttgagcatgacctccgtggacaaacccaggaagaagaagtccgacctaagggtcgccag
cgcaaattgtggaaagatgaaggacggtgggaacatgacaaatttcgagaagatgagcaa
gcaccaaaatccagacaagagctaattgctctttatggctatgatatccgctctgcacac
aaccctgatgatatcaaacccaggagggtgcgcaaaccaagatttgggagtccaccacaa
agagaatccaattggtccagtgaacgaccaagtaagccaccacgacatcagagtctagac
agcacttctgtggcacctcggacattcattaatcgaaactcagcaggaacaggacggatg
gccagtccaagggcattccccaaacctagtggctataaagatactcgcccaagttatcga
gctgtggatgtaagtagtcaacatgcacctcgcttcaatgaacagtcaaagcctgagagc
agttaccgcgccagacgatcagatccaatcccagcaagagagccgtctcccaaatctgag
ataccccctattcaaaacagccctgttaaaaaagaagaagttgttttggaaaatcaaact
ccacctgcagatattctacagacacagccagataggcctgtggaaaaaaaatcctattct
cgagcaaggagaagtcggaacaaagtaggtgagacaggaaaattggcagatgaagttcca
cctccatcagggttgatgccggcaccattaaaaagtgctgatattataccatcaccttct
tcagcaaagactggtaattgggaggtacctgttgaggcaaatctggatggtcttgaacaa
gacatgactcagttgaatatgacagaacaaaactggaatcaagggcaaccccagtttata
ccaccacagggtttgcctaatcagatgcacattggagcagccccaccccctcagttcaac
aggatagaagatatgggggttcaaggtgggcgtgcaaagcgctattcctcacagcgtcag
aggcctgtcccagaacctgctccaccagtccatataagcataatggaaggacattactat
gatgcactacagttccaaggtccaatttatacacatggtgaaaatcctacttcacttcct
cctcagggggtgattgttcaaccagaaatgcatctttcacatccaggattgcatccacac
cagacacctgcacctctggctaatgctggcttatatcctcctcctgtctccatgcctcct
gggcagcagcctcctcctccaccaccaccacaacagctgttagcaccaacctactttccc
cctcctggagtaatgaattttggcaatcccagttacccctaccctccaggagcccttcca
cctcccccacctccccacctgtatcctaacactcaagctcaatctcaggtgtatggaggg
gtcacctactacaacacagttcagcagcaagtgcagcccaaaccttcacctccccgaaga
gcctcccagccagtcactatcaagccaccccctcctgagacagatttgcagtttcttctt
gggaaaagtgtcggagtaggtaagatatcacctcaagaaatagttatttctctgcagaga
agtgcagtgggtaaggggcttcatactatcagctccaaagccatattaatgaaggagttc
tgctcttttcccccctctcatttctatctaggatggcagaaatga
DBGET
integrated database retrieval system
