Pseudonaja textilis (eastern brown snake): 113447908
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Entry
113447908 CDS
T09005
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04512
ECM-receptor interaction
ptex04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113447908 (FREM1)
04518 Integrin signaling
113447908 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ptex04091
]
113447908 (FREM1)
Lectins [BR:
ptex04091
]
C-Type lectins
Lecticans
113447908 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
EAV_GS
Motif
Other DBs
NCBI-GeneID:
113447908
NCBI-ProteinID:
XP_026574173
Ensembl:
ENSPTXG00000015293
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MGSIWVLLLFALNLKTACSTFVSVNQGLKVMRGQSVFLSQKELEFSIPREKDACKIEVVM
NEPVTQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDFVMLRLYRFTEMETFTETLILL
VKILEPDCNIIKMSSSALEVPEFHGLSNIVNKNIITLDYNRKINLECTLSLNSLETFLPA
HGQLVIGENKEEVPRGDQPQSSFHTTNLRTVQNIRVSCDEFLLMGLRYQHLDPPSPNIDY
IPIRLDLTDTRSKILYKSEYAWIPVHIKNAVSNQPPQPTFMAMLILEADQFILSPLSTAI
LDAEDSETPKSLLVFNITQPPQEGFITHLQDHTKAVSSFTWTSLDSMLIAYQPPNSSHTE
RRNYEVEFEVYDLYFEKSVPITLYISVRTADTNAPRVSWNMGLDLLEGQSRPITWEQLQI
VDNDDISSVRLVPVDGLQHGQLTLRGEKGFVFNVLDLKTGVVRYHHDDSDSTKDSIVFRI
FDGHHSSRHRFPINILPKDDSPPFLVSNVEIEVHEGGTILIQSSMLRASDMDSSDDYILF
NITRSPRAGEIMKKPKTDFIGYPVTKFLQKDLFNGIIYYHHLGGEIFEDSVELILYDSHD
PPNLSEIQIIRVHIIPVNDQLPKEFPGTNRHLTVKETEIAYLTKTHLHYIDMETQDSELI
YTITSPPFFSLAHDHTDAGKLFMVESIPKLIKDPSIPSLRSFTQHAINHMKVAYVPPMED
IGPEPQYIQFAFSISNQHGATVYGNCFNITVLPVDNQSPEVLTHSLKVEEGGQSTITKGH
ILISDEDTKLENIRIYLLTLPLHGTVELNENPMNQRDWLTCEDLQMSKVRYHHNGSEFPQ
DHILFEATDGINSFEFTLHVKVIPVNDEPPVMNADLIPFVWCPEGQAVPITSEHLYATDK
DSEDMQLMFMVARPSKYGVVKRDGLVIDRFLQADVVSGTVTYEHTSGEIGLALIFDVLTF
IVLDDEIDPDVKACCDDKSPFFSVPYHKSFPVYDINITIFPVDNQPPSIATGLAFAVLEG
ASAAITSKHLDATDLDTNADDLQFVLTSPPQFGYIENILPSPGFEKSNEGISIASFHMEN
VRKMQINYVQTRHRRIEPTTDQFMLYVTDGKHRSVEAPFYVFINPTNDEEPEFMARNFTV
QEGQMKELDPSIINAVDLDVPEDILTFTVLQQPHHGFLVKGAYGNNIFHYRQAIISQQYH
EIQVDSISMEILKNGLKLVYLHDDSDSLADDFSIQLSDGKHQVSKTISVKVTPVNDEKPV
LSRKGKIEVNMGEAQIISSAILSAEDKDTPREQIYYLFERVPENGHLQLKVGHDWVALYK
GMKCTQENIDMNTVRYIHTGTLGSNNEDSFSFHLWDGNNRSPEVVFPIAIKDVEKGNIAM
LMRPLTVLIGDKGLLTTDVLLAVDGTKKPEELHYVITSPPQYGQIEYVGYPGIPITSFSQ
MDVAGQKVCYVHSNRASSSKDTFR
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcatttgggttctgttgctttttgcgctgaatctgaaaaccgcctgctccacc
tttgtcagcgtcaaccagggactaaaagtgatgagaggtcaatctgtcttcctgtcacaa
aaggagttggagttttccatccccagagagaaggacgcatgtaaaatagaagtggtaatg
aatgagccagtcacccagagagttgggaagctgaccccacaggtgtttgactgccatttt
cttcccaatgaagtcaagtacactcacaacggatgcccaattctcgatgaagactttgtc
atgctgaggctatatagatttacagaaatggaaactttcacagaaacactcattcttctt
gtaaagatacttgaaccagattgtaatattatcaagatgagctccagtgctttggaggtc
cctgagtttcatggcctgtctaacatagttaataagaacataatcactttggactacaac
aggaagataaatttggaatgcacgctaagcttgaactccttagagacatttctgcctgcc
cacggtcagcttgttatcggagaaaacaaagaagaagtacctagaggagatcagccacag
agttccttccatacaaccaacctgaggactgttcagaatatcagagtgagctgtgatgag
tttcttctgatgggacttagataccaacatttggaccctccttcacctaatatagattac
attcccatcaggctggatctcactgataccagaagcaagattttgtataagtctgagtat
gcttggattcctgttcacataaaaaatgcagtttctaaccagccccctcaacctactttc
atggccatgctcatcttagaagccgaccaattcatcctgagtcccctatccacagccata
ttggatgctgaagacagcgaaacacccaaatctttgttagtctttaatatcacccagcca
ccccaggaaggcttcattacacacctgcaagaccacactaaagctgtctcgtccttcacc
tggaccagcctggatagcatgctgattgcatatcaacctccaaacagcagccatacagag
agaagaaattatgaggtggaattcgaagtttatgatttgtactttgaaaaaagtgtgcca
attactctttatatctctgtgagaacagcagacacaaatgcaccaagggtttcatggaat
atgggtcttgatcttctggaaggtcagtctcgcccaataacatgggagcagcttcagatt
gtagacaatgatgatatcagcagcgttcgcttggtccctgtggatgggttacaacatggg
cagctcactctaagaggagagaaaggattcgtgtttaatgtcttggatctgaagactgga
gttgttcgttaccatcatgatgacagcgattccaccaaagactccattgtctttaggatc
tttgatggccaccacagtagccgccacaggtttccaatcaatattctgcccaaagatgac
agccccccttttctcgttagtaatgttgaaatagaagtccatgaaggaggaacgatcttg
atccaaagctcaatgcttcgagcatcggatatggactctagcgatgactacattctcttc
aatatcaccagatcaccccgagcaggagaaataatgaaaaagcctaaaacagattttatt
ggttatccagttactaaattccttcagaaagatctgtttaatgggataatttactaccat
cacttaggaggagaaatatttgaagattcagttgagctgattctgtatgatagccatgat
cctcccaatctttcagaaattcagataataagagtgcacataattcctgtgaatgatcag
ctgccaaaagaatttccaggaacaaaccgtcacctgactgttaaggaaacagagattgct
tatttaacaaagacacaccttcattatatagacatggagacccaggacagtgagctaatc
tacaccataacatctcccccattcttctccttggcacacgaccacacagatgctggaaaa
ttgttcatggtagagagtattcctaagcttattaaggatccttctattccatcactaaga
tcattcactcagcatgccataaaccacatgaaagttgcctatgtgccacccatggaagat
attggtcctgaaccccaatatatccagtttgccttttccatcagcaatcaacatggggca
actgtgtatggcaactgtttcaacattactgttcttccagtggacaatcagtctccagag
gtgcttacacacagcttgaaagtggaagaagggggccagagcaccattaccaaaggccat
attttgatttcagatgaggacaccaaactggaaaacatacgtatatatctccttacgctt
cctcttcatggaactgttgaattaaacgagaatccaatgaatcaaagagattggctgacg
tgtgaagatttacagatgtccaaagtcaggtaccatcataatggttcagagtttccacag
gaccatattctttttgaggctacagatggcatcaattcctttgaattcaccctccatgta
aaggtgattcctgtaaatgatgagcccccggtgatgaatgctgacctcattcccttcgtg
tggtgtccagaaggacaggcggtgcccatcacttcagagcatctctatgcaacggataaa
gatagtgaagacatgcagctgatgtttatggttgcgcgaccctctaaatatggggttgtg
aagagagatggacttgtgatagatcgctttctccaagctgatgttgtttctggaacggtg
acatacgaacatacaagtggtgagattggcctagctcttatctttgatgttcttaccttt
attgtgttggatgatgaaatcgatcctgatgtaaaggcctgctgtgacgataaatctcca
tttttttccgtaccatatcataaatcctttccagtatatgatattaatatcacaatattt
ccggttgacaaccagccaccatccattgccaccggacttgcgtttgctgtgctggaaggt
gcctcagcagctatcacaagtaaacacttggatgccactgatcttgacaccaatgcagat
gacttacagtttgttttaacatcccctccccagtttgggtacatagaaaatattttgcca
tcgcctggttttgagaaaagcaatgaagggattagtatagcttcatttcacatggaaaat
gtgcggaagatgcagattaactatgttcagaccaggcacaggagaattgaaccaactaca
gaccaatttatgctgtacgtcactgatgggaaacatcgttcagtggaggcaccgttttat
gtcttcattaacccaaccaatgatgaagaaccagaattcatggcaaggaattttacagtg
caagagggacagatgaaggagttggatccatcaataatcaacgctgttgatttggatgta
ccagaagatatcctcacgtttactgtccttcaacaaccccaccatgggtttcttgttaag
ggagcatatggcaacaatattttccattacaggcaggcaattattagtcaacagtatcat
gaaattcaggtggatagtatatccatggagattttaaaaaatggattaaagcttgtgtat
ctacatgatgactctgacagcttagctgatgacttttcaatccagctgtcggatgggaaa
catcaagtgtcaaaaaccatttcagttaaggtcaccccagttaatgatgagaagccagtg
ctgagcagaaagggtaagatagaagtgaatatgggggaagcacagataatatctagtgct
attttatcagctgaagataaagatactcctcgggaacaaatttattatctgtttgagaga
gttccagaaaatggacatcttcagctcaaggtaggtcatgattgggtggccctgtacaaa
ggaatgaagtgcacccaggagaatatagacatgaacactgtgaggtatatacacactgga
actcttggatcaaacaatgaagacagcttctcctttcacctttgggatggaaacaacaga
tctccagaagtggtttttcccattgctattaaagatgtggaaaagggaaacattgcaatg
ttgatgagacccctcaccgtgttgataggtgacaaaggtctcctgacaactgatgtcctc
cttgcagttgatggtaccaagaagccagaggagctacactatgtgattacttccccaccc
cagtatggacagatagaatatgtcggctatcctggaatccccattacgagtttcagccaa
atggacgtagcagggcagaaagtctgctatgtccacagtaatagagcatcttcctctaaa
gatacattcaggtaa
DBGET
integrated database retrieval system
