Pseudonaja textilis (eastern brown snake): 113448198
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Entry
113448198 CDS
T09005
Symbol
VCAN
Name
(RefSeq) versican core protein
KO
K06793
versican core protein
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04514
Cell adhesion molecules
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113448198 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113448198 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptex00535
]
113448198 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113448198 (VCAN)
04091 Lectins [BR:
ptex04091
]
113448198 (VCAN)
Proteoglycans [BR:
ptex00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
113448198 (VCAN)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113448198 (VCAN)
Lectins [BR:
ptex04091
]
C-Type lectins
Lecticans
113448198 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_TEN
ig
cEGF
Motif
Other DBs
NCBI-GeneID:
113448198
NCBI-ProteinID:
XP_026574587
LinkDB
All DBs
Position
Unknown
AA seq
3086 aa
AA seq
DB search
MFKHFLWIYWTLSITCALRKVKVEKSPPVKGSLSGRAILPCFFSTLPTLPPSYHNVSEFL
RIKWSKIEQDIGGKDLKETTVLVAQNGNIKIGQGYKGRVSVPSHPEDIGDASLTLVKLRA
SDAGIYRCDVMYGIEDTQDIVSLAVDGVVFHYRASTSRYTLNFKQAQETCLENGAEIASP
EQLKAAYEDGFEQCDAGWLSDQSVRYPIRQPRIGCYGDMMGKEGVRSYGYRLSNETYDVY
CYVGSINGDVFHVTSPDKVTFKEAQTLCEEQGAVLASVGDLHAAWRNGFDQCDYGWLADG
SVRYPASVARIQCGGGLLGVRTLYRFENQTGFPYPDSKFDAYCFKHKENVSDSSMVELNI
PLESESAKSLTELNVIPPKATLHPYVSSLTSEMVKVKQEKKAPWIINLSTLLPQTVTDIS
DLSEMTQTETVLSDLVEITPIQDISDFNEASSESPIEQIEISPIRTVDAEERNNLSVPLE
TKEETHIGTQSTKIPVEAKSDNKLTTVVIPKELLTSIYEPVEEEDKEVLFPDQKLIMSTT
ISKIDKTSSSTTTLDENATDTPDSVATSFESKTISTPAYSVGFEIPVLTTADRVVHSTDS
VEKEEHTATPVVSEKMKDTVRFIPTPTASDVFSGSEVSIGEGSMFGSESTTGHMPVATDV
NEVEGFFTSYGSEVSSHPLITPTPDLQQETIETDEKYDWTNENTTKQQPILDISREDYPA
MVTEGIEIKQPFIFTDATKTVTPIAISEKDYSSSLILDTISKGSGIVTTDAALTEIITEV
IPVIQQESITRDLIRQTLVTDPASPSVVPGLHSLPEHDVAAEGSAYEINYTTTDTSPGIK
IRDYDTVTQSELFPGIIDPKLIATGVPPIESTTKSEHRSSSLDKSVVPISREEAAPVTKK
FDMGEVDISTHSPEGSGIKEEDVGMEPISFSVSATSKPMVVTGIATIVGTTVDKIPPTSA
SKPLIIKTQPPLIDREPDEDTSKDVLIIDESISPIKTTTDDDFTGKTVEPEIDTEYFTSS
TITAVSQPTGQPTEVLESQEEPPATSEVATGLENQPNIPVYVFSIPQNDTDSLPGLWDIL
DYHLLREVDEPPLDGESTTDEPCTASPEDVSEDIIIVDPFYPEIYQLEEDDSEEVDCENT
TAITTPPPLQFINGKQQVTTAPKDIKAEEARSDQILAHSKNVNFLHINETNMVSDNEFLA
TIQPNESTQDTAASQKLGEKYDMMEEVFSGDSETTHKDHEIIYLHGQSLSDNNEKSIQSE
TEHLEDLTAQPESIGSTSPHTTNIELKEDSEQLILTASTQGWLPHSTTGAQHETSVLQGN
YNTIVGHNILNSYINLLTTTSSTNLLNIPEGSGAVKEDGYKSTSALIKPGRQKHPSQEIF
SDDGNPIPPKPMPSASQSPASLYKETMFIAEHSIAEPFSTDSVTEIIFSTTKNQINMEED
EEDSTSSMSLNMENSTTVNTENLFNNNEYLSDHIRVVSEGSIAITQTISPLKTKENTENR
LSIYEESGDGEFWKKPNREILLGGPTSQVVSIDSQFLDGGFGGIDSMTQTTTQTSFPVRS
KYESSKGKEIDSTSGEPPLNHAIHTNHTMDVLDAELYGEATDTGIESQVSKNETYSQRAS
DKSEAKVLLPFNDKSVVEPNEEVITTITIQEQTNLFETSTMTNISPDIRVGMKLIPELRE
TDRTAQHSSSTVEYSVVVTNNITLQKGSSEFIVNERMQSLQLEDIRNISPAIFDKTIDLV
DIGSGEESVNDTSSMMLGNYTPTEKEINSKLQLSEPGSGDIDSITYSSIKKPVSSEFLVE
GSKNLIKNESEEPSMVFQHPLVTALNISNTTIVPLVNQSITGEFVNESKMEQEMPNVLKT
RASDKTPHLETEMYYEEKRKIIETESVTQQSEISGTLKFNPHEKELQFDINYVTESLQKY
PPSYDKTASTLLINAEKEEWLEEKTNPAKDIHILPPPSTTYRTITTAINVPFLSKQGSEN
EFFMVHTTAPRNSATLKESSNALKLDTLQPKSSEELSSEEKHEEFERHTDDSKYAFKYPP
MLEDNLSSASDETFPVVSIVHSETSTINWFISEDDQNKDKSYQGEQNVLAATDGTSQGQA
WMFVKHENKTPASKLFIEPPTTGTIETPQTTLLSKVLSVGNHDGSGEGSGWQDMIEKKSE
SFTQLPNWELPLLTRPPHYSDIENTGATVDGSQKGPHAHTEKHDKTTTPDTDISESFSYE
SSTNNIKDYEDLIPVAGFKRNYSEDISSFIDIIGTGHGVISDKSTIIDVDNLKLNANIED
IIDHTTERPGRHSTYNMYTSAVKIQNTTPEMLIDNKVTGNQGSSVGSKFIHSESMVSDHT
PTSEVGSGDNVFFTTETAISHDSLKTSILLPTLPLLVSSTISPISSNENTTDVRSVIEHT
ESEGMIQPEQPTLSDNQVVADESEISTMSGEGQVQIDKQKPVVLPSTLAYMPPKTGQTLT
THQPKESTASNQLVSQNLTKSKEMSYKVYEGMKTELTKSIETVMKNLLLTTQTPKLPVTV
HLLDDVSEHTEEIMQSTSSSTDSSKRGLPAPETFREVSADTAVTYKPDLKDLSNNTAFPN
VELENSFLESITISDGHVQETKEMPKDATEKTTVFEEFLSKDVIPSSFSHSDTGDLLEEE
TPEKVKELNQLDGNSADGSLLWIQSIPSSIPHESKTGGVFGADGEASVWPISPPPSADKI
VKFQTAQPESTTISSSLVNEYSGPESISDYNKQTINTKDVNANELVTPPFLLLDVTNGSD
FLIGPGEGSVEGSAIQIPGQDLCKSNPCLHGGTCYPRDSFYICTCMPGFSGDRCEVDIDE
CQPSPCRNGATCIDGVSTFTCLCLPSYVGALCEKDTETCDYGWHKFQGQCYKYFAHRRTW
DAAERECRLQGAHLTSILSHEEQLFVNRIGHDYQWIGLNDKMYENDFRWTDGSVLQYENW
RPKQPDSFFSSGEDCVVIIWHENGEWNDVPCNYHLTYTCKKGTVACGQPPVVENANTFGK
MKPRYEINSLIRYHCKDGFIQRHVPIIRCQGNGRWDLPKITCMNPSSFQRTYSKKYYYKN
SPGKVNSFNSSKHFHRWIRTWQDSRR
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacatttcttgtggatatattggaccttatctataacatgtgctcttcgcaaa
gtgaaagtggagaaaagtccaccagtgaagggctcactctctggaagagccatcctccca
tgctttttttcaactttgccgactttgcctccaagctatcacaatgttagtgagtttctc
cggattaagtggtcgaagattgaacaggacataggtggaaaagatctcaaagaaactaca
gtgttggtggcccagaatgggaatatcaagattggacaaggttacaaaggaagagtgtca
gttccaagccatccggaagacattggtgatgcatcattgactttggtgaagttacgtgca
agtgatgctgggatttatcgctgtgatgtaatgtatggaattgaagatacccaagacatt
gtttcactggcagttgatggtgttgtgtttcactatcgtgcgtctaccagtagatacact
ctgaatttcaaacaggctcaggagacctgtttggagaatggtgctgaaattgcaagcccc
gaacaactgaaagctgcatatgaagatggatttgagcaatgtgatgctggctggttgtct
gatcaatctgttagatatcctattaggcaacctagaattggctgttatggagacatgatg
ggaaaagaaggagttagatcctatggatatcgcctttctaatgaaacttatgatgtctat
tgctatgttggaagcataaatggtgatgtcttccatgtaacttctcctgacaaggttact
tttaaagaagcccaaactctgtgtgaggaacaaggggcagttcttgcttcagttggagat
ctgcatgctgcctggagaaatggttttgaccaatgtgattatggctggttggcagatggc
agtgtgcgctatcctgcctctgtggcaagaatccaatgtggtggaggtttacttggagta
cgaacactgtatcgctttgagaatcaaactggctttccttacccagatagcaaatttgat
gcatattgttttaaacataaagagaatgtatcagattcttcaatggttgaactaaatatt
cctttggaaagtgaatcagccaaatcattaactgaactaaatgtaattcctccaaaagct
acacttcatccatatgtatcttcgctcacatcagaaatggttaaggtaaaacaagaaaag
aaggcaccttggatcattaatttatctacccttctacctcaaactgttacagacatttct
gatttgtcagaaatgacccaaacggagactgtattaagtgacttagtggagattacacct
atccaagatatttctgatttcaatgaagcaagttctgaaagtccaattgaacaaatagaa
atatctccaataagaactgtggatgctgaggaaaggaataacctgagtgtacctttagaa
acgaaggaggaaacacatattggcactcaatccaccaaaataccagtagaagcaaaaagt
gataataaactcacaactgttgtcattccaaaagaattgctcacaagtatttatgaacct
gtagaagaggaagataaagaggttctttttccagatcagaagttaataatgtctactacc
atttctaagatagataaaacttcatcttctacgacaaccttagatgagaatgccacagat
acaccagattcagtagcaacttcatttgaaagcaaaacaatatctaccccggcttattca
gtaggctttgaaataccagtgcttacaacagctgacagagtggtacactcaacagattca
gtagagaaggaagagcacacagcaacacctgtggtttcagagaagatgaaagatacagtg
agatttattccaacaccaacagcttcagatgtgttttcaggatcagaagtatcaataggt
gaaggaagcatgtttgggtccgagtctaccacagggcatatgcctgttgccacagatgta
aatgaagtagaagggttctttaccagctatggatctgaagtgtcaagtcatcccctaata
acaccaacaccagatttgcaacaagaaaccattgaaacagatgaaaagtatgactggact
aatgagaatacaaccaaacagcaaccaatcttagatatttcaagagaagattacccagca
atggtcactgaaggtattgaaataaaacaaccttttatatttacagatgccacaaagacg
gtaactcctattgcaatttcagagaaagactatagcagttctttgattttagataccatt
tctaaaggttcaggtatagttactactgatgcagcactcacagaaatcataacagaagtc
ataccagtgattcaacaggaatctattacgagagatctaattaggcaaacattggtcact
gacccggcttcccccagtgttgttccaggattacattcattacctgaacatgacgtagct
gctgaaggatctgcatatgaaataaattatactactacagatacaagtcctggtataaaa
ataagagattatgacacagtcacacagtctgaattgtttcctggaatcattgatcccaag
ctgatagcaacaggtgttcctcccatagaatcaactaccaaaagtgaacataggtcttct
tccttggacaaatcggtagttcccatctccagagaagaagctgctcctgtcactaaaaag
tttgatatgggggaagtagatatttcaactcatagcccagaaggatcaggaataaaagaa
gaggacgtaggaatggaacccatttcattttcagttagtgcaacaagcaaaccaatggtg
gtaactggtattgccaccattgttggtactacagtagataaaatcccaccaacttcagca
tccaaacctttaattatcaaaacacagccacctctgattgatagggagcctgatgaggat
acaagtaaagatgtgctgataattgatgaatctatttctcccattaaaactactactgat
gatgattttacaggcaaaacggtagagccagaaattgatactgaatattttacctcatca
actatcactgcagtttcccagcccacaggacaacccacagaggttttagagtctcaagaa
gagcccccagctacttcagaggttgctacagggttggaaaaccaacctaacatacctgta
tatgttttttctattccacaaaatgatacagattcattgcctggactttgggatatactt
gattaccacctccttcgtgaagtagatgaacccccactagatggtgaatcaaccactgat
gaaccctgtacagcaagtcctgaggatgtttctgaagatatcataattgttgaccctttc
tatcctgaaatatatcaactggaggaagatgatagtgaagaagttgactgtgagaatact
actgctatcacaactcctccaccattgcagtttattaatggaaagcagcaagtgaccact
gcacctaaagatataaaagctgaagaagcaagaagtgatcaaattttagcacattccaaa
aatgtaaattttttgcatatcaatgaaactaacatggtgtctgataatgagttcttggcc
acaatacagccaaatgaatcaactcaagatactgctgcttcacaaaagctaggagaaaaa
tatgatatgatggaagaagtctttagtggagactcagaaactacacataaagatcatgag
ataatatatctccatggccagtccttatcagacaataatgagaaatcgatacagtctgaa
acagaacacttagaagatttaactgcccagcctgaatcaataggttctacatctccccac
acaacaaacatagagctaaaagaagactctgaacagttaattctaacagcttctactcaa
ggttggttacctcattctaccactggagctcaacatgagacttctgttctgcaaggaaat
tataatacaatagttggacataatatacttaattcttacataaatttattgacaaccact
tccagtactaatttgttgaatataccagaagggtctggagctgtaaaagaagatggctat
aaatcaactagtgcattaataaaaccaggaagacaaaaacatcctagtcaggaaattttc
tcagatgatggaaatcctattccacctaaacctatgccttctgcttcacaatctcctgct
tctttgtataaagagaccatgtttattgctgaacatagtattgcagaaccttttagtact
gactctgttactgaaataatttttagcactactaaaaatcaaattaatatggaggaggat
gaggaagacagtacaagctctatgtctttaaatatggagaattcaaccactgtcaacaca
gaaaacttgttcaataacaatgaatacttaagtgatcacatcagagttgtgagtgaagga
tccatagccatcacccaaacaatctctcctctcaaaaccaaagaaaacacagaaaataga
ttgtctatttatgaagaatctggtgatggagaattttggaagaaacctaatagagaaata
cttttggggggtcctaccagccaagtggtaagtattgactcccaatttctagatggaggt
tttggaggaattgatagtatgactcaaaccactacacagacttcatttccagtgaggtct
aaatatgaaagcagtaaaggaaaagaaatagatagtacttcaggtgaaccaccattgaat
catgcaattcatactaatcatacaatggatgtgttggatgctgaattgtatggggaggct
acagacactggaatagaaagtcaagtatcaaaaaatgaaacttacagccaaagagcatca
gataaatcagaggcaaaggtgctattgccatttaatgacaagtctgttgtggagccaaat
gaagaagtgataacaactataacaatacaggagcaaacaaatttgtttgaaacatctacg
atgacaaacatttctcctgacatcagggtaggaatgaagttaataccagaattaagagaa
actgatagaactgcacaacattccagcagtactgtggagtattctgttgtagtgacaaat
aacataactctgcagaaaggaagttctgaattcatagtaaatgaaagaatgcaatctctt
cagctggaagatataagaaacatttctccagctatctttgacaaaacaattgatcttgtg
gatataggctctggagaagaatcagttaatgacacaagtagtatgatgctgggaaattat
actcccacagaaaaagaaattaatagtaaattacaattgagtgaaccaggttctggagac
atagattctataacatactcttctataaaaaagccagtttcatctgaatttttggtagaa
ggatctaaaaatctaataaaaaatgaaagtgaagaacctagcatggtatttcagcatcca
ctagttacagcattaaacataagtaataccactatagtaccattagtgaaccaaagcatt
acaggagagtttgttaatgaatcaaaaatggaacaggaaatgccaaatgtattaaaaaca
agagcttctgataaaaccccccatttggagacagaaatgtattatgaagaaaaaagaaaa
attatagaaacagaatctgtaacacaacagtcagaaatttctggtactcttaaatttaat
ccacatgaaaaagaactacaatttgatattaattatgtcactgaatctttacagaaatat
cccccttcatatgataaaactgcaagcactttattaataaatgcagagaaagaagaatgg
ttggaagaaaagactaatccagccaaagacattcacatacttccacccccatctacaacg
tatagaacaataaccacagcaattaatgttccatttttgtcaaaacaaggctctgaaaat
gaattttttatggttcatactactgcacctaggaattctgctacattaaaagaaagttct
aatgcattaaaacttgacacacttcaacctaaaagttcagaagaactttcttcagaggaa
aaacatgaagaatttgagaggcatactgatgattccaaatatgcatttaaatatccaccg
atgctagaagacaatttgtcttcagccagtgatgaaacctttcctgtggtatctattgta
cattctgagacatctactataaattggttcatttctgaagatgatcaaaataaagataag
tcttaccagggagaacaaaatgtactagctgcaacagatggaacttctcaagggcaagcc
tggatgtttgtaaagcatgaaaataaaactcctgcttcaaaattatttattgaaccccct
actactggaacaatagaaacaccacaaaccactttattatctaaagtgttgagtgttgga
aaccatgatggttctggggaaggatctggttggcaagacatgatagagaagaaatctgaa
tcatttacccagttgccaaactgggaactaccacttctaactcgtcctcctcattattct
gacattgagaacacaggtgccacagtggatggatcccagaaaggaccacatgctcacaca
gagaagcatgacaagacaacaacacctgatactgacatctcagaaagcttttcatacgag
agttccacaaacaacataaaagactatgaagatcttatccctgtagctggtttcaaaaga
aattattctgaggatatttctagcttcattgatattattggaacagggcatggagtaata
tctgataaatcaacaattattgatgttgataatttgaaattaaatgcaaatattgaagac
attatagatcatacaactgaaaggcctggaagacactcaacttataatatgtatacatca
gcagtgaaaattcaaaatacaacacctgaaatgttaattgataataaagttacaggtaac
caaggaagttctgtaggtagtaagttcatacacagtgaatctatggtatctgatcatacc
ccaacatcagaggtgggttcaggagataatgtgtttttcacaacagaaactgcaatttct
catgactcacttaaaacatccattctgcttccaacactacctcttcttgtcagttctacc
atatctccaattagttctaatgaaaataccactgacgtaagatctgtcatagaacataca
gaatcagaaggaatgatacaacctgaacaaccaacactgtcagacaatcaagtagtagct
gatgaaagtgaaatttctacaatgtcaggagagggacaagttcagatagataaacagaaa
cctgtggttcttccttcaactctagcatacatgcctccaaaaacaggacaaactttgacc
acacaccaacccaaagaaagtactgcttcaaatcagcttgtttcacaaaatctaacaaaa
tctaaagaaatgagctacaaggtgtatgaaggaatgaaaactgaattgacaaaatcaata
gaaacagttatgaagaacttgcttctcacaacacaaacacccaaactgcctgtgactgtg
catttacttgatgatgtttcagaacacacagaagaaatcatgcaaagtacttcatcatca
actgattctagcaaacgtggtttgccagcaccagaaacttttagagaagttagtgctgac
acagcagtaacttacaaacctgatttgaaagatttgtccaataatacagcatttcctaat
gtggaactggagaacagtttccttgaaagtataactatatctgatgggcatgtacaggaa
acaaaagaaatgccaaaagatgctacagaaaaaacaactgtttttgaagaatttctttca
aaagatgtgataccatcaagcttttctcattctgacactggagacctattagaagaagaa
actcctgagaaggtaaaagagctaaatcaattagatggaaatagtgctgatggaagtttg
ttatggatacaaagcatcccttcttcaattccacatgagagtaaaacaggtggagttttt
ggtgctgatggggaagccagtgtttggccaatctcaccgccaccatctgcagataaaatt
gtgaaatttcaaacagcccaaccagagtcaacaactatttcttctagccttgtaaatgaa
tattcaggtcctgaaagcatttctgattataacaaacaaacaataaatacaaaggatgta
aatgccaatgaacttgtaactccaccatttttacttctggatgttaccaatggatcagat
ttcctgattggtccaggtgaaggttcagttgaaggctcagcaattcagatcccaggccaa
gatctatgtaaaagcaatccatgcttgcacgggggcacttgttacccacgtgactctttc
tatatctgcacttgtatgccaggtttcagtggtgatcggtgtgaagtagatatagatgaa
tgtcaacccagtccttgcagaaatggtgccacatgcattgatggtgtcagtacatttact
tgtctttgtcttccaagctatgttggagcactttgtgaaaaagacactgagacctgtgat
tatggatggcataaatttcaagggcaatgctacaaatactttgcccatcgcaggacgtgg
gatgcagctgagagagaatgccgcctgcagggtgcccatctaaccagcatcttgtctcac
gaagaacagttgtttgtaaaccgtataggacatgactatcagtggattggcctaaatgat
aagatgtatgagaatgacttccgctggacagatggcagcgtgctgcaatatgaaaactgg
agaccaaaacagccagacagtttcttttcttctggagaagattgtgttgttataatttgg
catgaaaacggtgaatggaatgatgtaccatgcaattatcacctcacttacacatgcaag
aaaggaacagttgcttgtggccaaccaccggtggtagaaaatgcaaatacctttggaaag
atgaagccccgttatgaaattaattcattgatcagatatcattgtaaagatggcttcatc
cagcgacatgttccaataatcagatgccaaggaaatggccgatgggatttacctaaaatt
acctgcatgaatccatcttcattccaaaggacttattcaaaaaaatattattataaaaat
tcaccaggaaaggtgaactcgtttaattcatcaaaacattttcatcgttggatcaggaca
tggcaggattcacggcgctga
DBGET
integrated database retrieval system
