Pseudonaja textilis (eastern brown snake): 113448420
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Entry
113448420 CDS
T09005
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113448420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113448420
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113448420
mRNA degradation factors
5'-3' decay
Decapping complex
113448420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
113448420
NCBI-ProteinID:
XP_026574889
Ensembl:
ENSPTXG00000008057
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPGGSVNENQRTSSSYNGDLNGLLVPDPTAAGDGSSST
KPVPQTVPLGALQDKQVICLSGDDNSTCMVILAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASSGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWCLSMENGKIQEEILVNIKRSDGTPLNNFRRIIWCPFIP
DENEESCEEGSQTLALLHEDRAEVCDLDIIRANHSSWPVEVTNIKEGYIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPSRCLHEWKPHEGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNQELKMWCTVSWTCLQTIQFSPDIFSSVSVPPSLKVCLDLSAEYL
ILSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQMVSRCRLRHTEVLSAE
EESDGISAEGAQGSGTTGSAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMVTPAPPHGSR
EDFAFPDHLADIGMEGRGSEKGSIHGSQPDLRRISELSVPVDFLPPSNDTKPKLMTPDAF
MTPSTSLQQITGSPGSSISSLTAVTTISSTSVGDPPLPRPSEDMSLSPKMQLDANLTLSG
SGGSLQASPRNHSVLLPGLPDKLTPKVPIPVSPGNPPPLALEQEEVEPLVVPQSSPTRER
SPDVISSASTAMSQDIPEIASETLQRSFSAAPSGLPVEILDSNHHTDSMASAASALHLLS
PRNRHSSEPSHHSLDMAPNEVDMLTTPSLLEAALPQENVALDSGVSQPWPAAPDITRETR
NSMAGSPRNEVEEKHKSSCHRHTYRLLQHDSQDASAEQSDHDDEVASLATTSGGFTTKVT
AQRLPVKDWKAKVSPRASPKLKRKGKKDDRDAPQSPRSFDQQSAPEYQEELMSLLRTQQR
EIAELRQNQTELMQRLADHLDAVQSSLMGHIERVIDSQQEQEQRRLEQALAEGQQRSGQL
QEHLSQQLSQSLSTAACNRLERTIREEMKKAVPLCVSKSLDPITGQLSSTIANKLTAIEG
TLKENIAKLVKSKEPYDLFSSFPPFLSSMQESILAQVQRVIKGEVSTAMKEQQAAVTSSI
MQAMRSAAGTPIPATHLDFQSQQAHMLQLLQQGHLNQAFQQALTAADLNLVLYVCETVDP
QQVFGQDPCPLSQPVLLSLIQQLSSDLGSQTELKLNYLEEAVMHLDHSDPITRDHMGSVM
NQVRQKLFQFLQVEPHNNVSKPARRLMIMLQGLVTHNMS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctagcatcgatatcgaggacgcgactcagcacctgcgcgatatcctcaag
ctggaccggcccggcgggtcggtgaatgaaaaccagagaacatccagttcatataatggt
gacctgaatggtcttctggtgccagatcccaccgcagctggagacggctcgtcctccact
aagcctgttccacaaactgttcctctcggagcgctacaagacaaacaagttatctgcctc
tctggagatgataattccacctgtatggtgatccttgctaaagatgttgaaatagtggcc
agcagtgattccagcatcaccagtaaagccaggggaagcaataaggtaaaaatccagcca
gtggccagatacgactgggagcagaaatattactatggcaacctcattgctgtctcaaat
gcctatctggcttatgctattcgaggtgccagcagtggctcggccatggtgcgagtcctg
agtgtcagcacggctgagcggacgcttctgaaaggcttcactgggggcgtggcagatctg
gcttttgctcacctcaactccaaccagttggcctgcctggatgaagctggcaacctgttt
gtctggtgtctgtcaatggagaacggaaaaatccaagaagagatcttggtgaatatcaaa
cgatctgatgggactcccctgaacaactttcggaggataatatggtgtcccttcatccct
gatgagaatgaggagagctgcgaagaaggcagccagactctggcgttgctgcatgaagac
agagctgaagtctgtgaccttgacataatccgagccaaccatagttcatggccagtggaa
gtaaccaacatcaaagaaggctacattgtggtgaagggtcatagcacgcgcctgagtgag
ggagcactttctcctgatgggactgttttggctacagcaagccatgatggctacgtcaaa
ttctggcagatttacatagagggacaagatgaaccaagtcggtgcctccatgaatggaaa
cctcacgagggcaggcctctttcctgtttgctcttctgtgacaaccataagaaacaagac
ccagaggttcctttttggaggtttctcatcactggagcagatcagaatcaagagctgaaa
atgtggtgcaccgtctcatggacctgcctccagactattcagttttctccagatatattt
agctctgtgagcgtccctcccagtctgaaggtctgcctggatctgtcagccgagtaccta
attttgagtgatgtgcaaagaaaggtcttatacgtgatggagcttgtccagaaccaagaa
gagggcaaagcttatttcagctccatctcagagttcctgttgactcacccagtcctgagc
ttcggcatccaaatggtcagccgctgccgactgaggcacaccgaagtcctctcagcagaa
gaggagagtgatggcatcagtgctgaaggcgctcaaggttcaggtactacaggatcggcc
gcaggggtgctgatcaaactcttctgtgtccacaccaaggcccttcaggatgtacagata
aggttccagcccctccatagtccagatatggtcactccagcccctccccatggttcccgt
gaagactttgcgttccctgatcacctggccgacataggcatggaagggcggggctctgag
aagggatccatccacggctcccagccggacttgcgacgcatttcggaactgtctgtgccc
gtcgacttcctccctccatcgaatgacaccaaacccaaacttatgactccagacgcgttc
atgactcccagcacttctctgcagcagatcacggggtctcccggaagtagcattagttcc
ctcactgctgtgacgaccataagtagtacttcggttggcgaccccccccttcccaggcca
tcggaggacatgtccctaagcccaaagatgcagcttgatgccaacctcaccctgagtggc
agcggtgggagtctccaggcgagcccacggaatcattcggtcctgctccctggccttccc
gacaaactgaccccaaaggtccccattccggtttccccggggaaccctcctcctttggcc
ctggagcaagaggaagtggagcctctggtggtaccccagtcctcgcccactcgtgagcgc
tccccagatgtcatctcttccgcctcgactgccatgtcccaggacatccctgaaatcgcc
tcagagaccctgcagcgcagcttcagcgcagccccgtctggcctcccggtagaaattctg
gactccaaccatcacacggacagcatggcttcggcggcctccgctctccacttgctttcc
ccacgcaaccgccacagctcggagcccagccatcactccttggacatggcccccaacgag
gtggacatgctgaccaccccctcactgctggaggcggccttacctcaggaaaacgtggca
ttggatagtggagtgagtcagccgtggccggctgctcctgacatcaccagggagaccagg
aacagcatggcgggcagccccaggaatgaagtggaagagaagcataagagctcctgtcac
aggcacacctaccgcttgctgcaacatgacagccaagatgccagcgccgagcagagcgac
cacgatgatgaagttgcgagcttggctaccacttcaggcgggttcacaaccaaagtgact
gcccagcggctgccagtcaaagactggaaggccaaagtttctcctcgggcctctccaaag
ctgaagcggaaggggaagaaagacgacagggatgcgccacagtccccaaggtccttcgat
cagcagagcgctcctgaataccaggaggagctgatgtctctgctcaggacgcagcaaagg
gagatcgccgaactgagacaaaatcagacggagctgatgcaaaggctcgccgatcacctg
gatgccgtccagagctcgctcatgggtcacatcgagcgggtgatcgactcccagcaggag
caggagcagcggaggctggaacaggctctggcggaagggcagcagcgcagtgggcagctg
caggagcacctctcccagcagctctcccagtccctctctacggctgcctgcaatcggctg
gagaggaccatccgcgaggagatgaaaaaggccgtccccctgtgtgtatctaagagcttg
gatcccatcactggacagctgagcagcactattgcaaataagctaacagccatcgaagga
actctgaaggagaacattgccaaactggtgaaatcgaaggaaccttacgacctcttttct
tcttttcccccttttttgtccagcatgcaagagtccatcttggctcaggtgcagcgagtc
atcaagggggaggtgagcacggccatgaaggagcagcaggctgcggtcacctccagcatc
atgcaggccatgcgctccgctgcaggcacgcccatccctgccactcacctagacttccag
tcccagcaggctcacatgctgcaacttttgcagcagggacacctgaaccaagccttccaa
caggctctcactgcagccgatttgaatctggtcctctatgtctgtgagaccgttgatcct
cagcaagtgtttggacaggacccttgtcctctgtcccagcctgtcctcctgtctctcatt
cagcagctgtcttcagatttaggctcccagacagagctcaaactcaactacctggaggag
gcagtgatgcacctcgaccacagcgatcccatcacccgcgaccacatgggctcggtgatg
aaccaggtgcgccagaaactcttccagttcctgcaggtggagcctcacaacaacgtgagc
aagcccgcacgtcgcctgatgatcatgctgcaaggcctggtcacccacaacatgtcctaa
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