Pseudonaja textilis (eastern brown snake): 113448424
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Entry
113448424 CDS
T09005
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptex03036
]
113448424
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
113448424
Chromosome and associated proteins [BR:
ptex03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113448424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
113448424
NCBI-ProteinID:
XP_026574893
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MIEVIILKIENPDCFWVYITGGRKIVVNEMEYETLQTEMNQFYNKHYQCVDAKPCVLEEG
QVCAVYCEELKSWCRAVVNSIISYTDYYIAECFLVDYAKTIPVNTEKICVVIKPFVRLPY
RATKFRLYCVKPVTLRVNYYNDNSEIVPANKWDIAAIQYFQNLLNEATQVEAKICAVEED
NFAVYLYVTIKGEKVCVNDALVAKNYACYELEETNQKRDSEGGKSRSEEKNPVRLLWPML
LRESKVSEMGAAPICDNSEIAELTHFPEINLHKPKQPDAVVPVSPLKQGVTFSVPSDMQT
VSNLPKTSTKLQERENDLYENNLGVKLLQFLNPDPLKIATEQETEELKLNITTTCLPVVL
SNKIEPCSSLETAPLFPALKKELLRKQFQGPNHVQSYSWPAIARGYDSLIISSESDPLSY
LLPIITFLQSRNCYISLSPRQGPVALVICPGQRRAELVFEHLKMYSHCSRPLHPMLLFLG
MKKEEIKSVRIPRGCEIVVTTPPIFLRLLEHHSLLFLRLCHLVFDEVDVLFSDAKEQILT
ILQYYKSNLSVEEKEFVPQQIVAVGNHWDKNIEVLTKEFMNDPYIIITSMGEAAIYGKVQ
QVVQLCLECDRISTLLQTLDFTPTDAQKTLIFTSCVEERDMVYKAVESISIFCLKMNPGI
GFHADYIVEQWNKTISPGTHVVLVLTDDCTVAAKFTDATRVIHFSFPPTPRIFGARLHGL
SANFQNSVEKSPSLGKEQSKAKSILLLTEKNACHVVGVLNYLERAEAFIPPDLYNFTRGV
LEAKEEKRSGQPFCSSIKAYGICKNKNRCPDRHRINLQIDAPSKVAEEALQTGGIITILP
LFIVDATNYLGRVVGKWGNLYAALETEMKDYYQESSNCTPVDKVEKLAMYGLREENSFHR
VQVLDVEQKEEPGAFYNVDIKYIDEGRTGYVQNQHLLSLPEQFQALPPQAVEFIVCRVKP
IDNEAEWHPKVSRCINDKIRGKPHEAKVALVLGNTIWVDPVIRVTKLQDLKTSINEYNIR
SEILSTGLGVDNPEHIQELEKLFNEAEIPHEKKEKHALLNPSTDERNEEAEPLEQNVSNP
ATLSSETSSKEPLPLVQKSQHSQDIIHDGYSQVSLENHCDETVQNKNNEDILQISPKCFH
PTIKWFDKQDAVVVKVKLQNISNYNCRIFEQRIAFSASANGKFYLADMELQRSILREEST
CVLKGDEPTILLVKVKKEPWCSLLKEKNHHVSFDFDYLDDNEERSPFCIASSPKKVYQIP
IGVCEEEEEEEEESSKDSDSESDLSSC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcataatactgaagattgaaaatccagattgcttttgggtctacataaca
ggaggcagaaaaattgtagtcaatgaaatggaatatgaaacacttcagactgaaatgaat
caattctataacaaacattatcaatgtgtggatgccaagccttgtgtactagaagaagga
caggtttgtgctgtttactgtgaggaactgaaatcttggtgcagagctgttgttaattca
atcatatcatacacggattattacattgcagaatgtttccttgtggactatgccaaaact
attcctgtgaacactgaaaagatctgtgtggtcataaaaccatttgtgaggctgccttat
agagctacaaagtttaggttgtactgtgtcaaaccagtaacactacgtgtcaactattac
aatgacaattctgagatagtgcctgctaacaaatgggatattgcagcaatccagtacttc
caaaacctcctgaatgaagccactcaagtggaagccaagatatgtgctgttgaagaggat
aattttgctgtctatctttatgtcacaataaaaggtgaaaaggtgtgtgtgaacgatgct
cttgttgcaaagaactatgcttgctatgaacttgaagaaacaaaccagaaacgagattca
gaaggtggcaaatctcgttcagaggagaagaatcctgtaaggctgctgtggccaatgtta
ctacgagaatctaaggtttctgagatgggtgctgctcctatttgtgataattctgagata
gcagagttgacacatttcccagaaattaacttacataaaccaaaacagcctgatgcagtg
gtgcctgtttcccctttgaagcaaggagtaactttttctgtaccatcagacatgcaaaca
gtcagcaacttgcctaagacgagtaccaaattacaggaaagggagaatgatctctacgag
aacaaccttggggtgaagcttctacagtttttaaaccctgatcctctgaaaattgccact
gaacaagaaactgaggagcttaagctgaatatcaccactacgtgtcttcctgttgtgctg
agtaataaaatcgaaccttgttcatctctagaaaccgcaccactgtttccagctttaaaa
aaggagcttttaagaaagcaattccaaggacctaatcatgtacagtcttactcctggcct
gcaatagcacgtggatatgattcgcttattatctcttctgaaagtgacccactttcatat
cttctgccaatcattacatttttgcagtcaagaaattgctacatatcgttatcacctaga
caaggtccagtagcattagtcatatgcccaggccagaggagagcagaactggtatttgag
cacctgaaaatgtacagccattgctccaggcctctccacccaatgttgcttttcctggga
atgaaaaaggaagaaatcaagagtgtaagaattccaagaggatgtgaaatcgtggtaaca
accccacctatctttttgcggctgctcgagcatcatagtttactcttccttaggttgtgt
catctggtgtttgatgaagttgatgtattgttctctgatgccaaggagcagatacttact
attttacaatactacaaatctaacttgagcgttgaagaaaaggagtttgtgccacagcag
attgttgctgttggaaaccactgggacaaaaatatagaagttttaacaaaagaattcatg
aatgatccatatattataatcacctccatgggagaagctgccatatatgggaaagtgcaa
caggttgtgcagctctgccttgagtgtgaccggatctctactttacttcaaaccttagat
tttacccctacagatgctcagaagacactgatttttacaagttgtgtggaagaaagagac
atggtatacaaggcagtagagagcatttcaatcttttgcttgaaaatgaacccgggaatt
ggatttcacgctgattatattgtagagcagtggaacaaaacaatcagccctggaacccat
gttgtattggttttaaccgatgactgcacagtagctgcaaaatttacagacgcgacccgt
gtcattcatttcagctttccaccaactccaagaatctttggtgcccgcttacatggcctg
tctgccaacttccaaaattcagtagaaaagagtccatcactgggaaaagaacagagcaaa
gccaaatccatcttgctgttgacagagaaaaatgcctgccatgtagttggagtgttgaat
tatttggaacgggcagaagctttcatcccccctgacctgtacaactttaccaggggagtg
ttggaagccaaagaggaaaagagaagcgggcagccgttttgttcttccattaaggcctat
ggaatatgcaaaaataaaaaccgctgtccagatcgccatcgcattaaccttcaaattgat
gcgccctcaaaagtagctgaggaagctctgcaaacaggtggaattataacaatactgcct
cttttcattgtggatgccacaaactacttaggccgtgtggtagggaaatggggtaatctc
tacgcagctcttgaaacagagatgaaggactattatcaggaatctagcaattgtacccca
gtggacaaagtggagaagctggcaatgtatggactgcgggaagaaaattctttccacagg
gtccaagtgctagacgtggaacaaaaagaagagcccggtgcgttttacaacgttgacatc
aagtacatagatgaaggcagaactggctatgttcaaaatcaacacttgcttagtttaccg
gaacaatttcaagcgttgcctcctcaggctgtggaattcatcgtttgtagggttaaaccc
attgataacgaagccgaatggcacccaaaagtatccagatgtattaatgacaaaatcaga
ggaaaaccacatgaagccaaagtagcccttgtcctgggaaatacaatttgggtagatccg
gtgattcgagtcactaaacttcaagacctgaaaacttcaatcaacgaatataatattcgc
tctgaaattctatctactggattgggagtggacaatcccgagcatatacaggaacttgag
aaattatttaatgaggctgaaataccccatgagaaaaaagaaaagcatgcattattaaat
ccctccacggatgaaagaaatgaggaggctgaacctcttgagcagaatgtctcaaatcct
gcaactctgagctcagagacctcaagcaaagagcccttgccccttgtacagaaatcgcag
cacagccaagatatcatccatgatggttattctcaagtatctttagaaaatcactgtgac
gaaacggtgcaaaataagaacaacgaagacatcctgcagatttcgcctaaatgcttccat
ccaaccataaaatggtttgataagcaagacgccgttgttgtaaaggtaaaattgcaaaat
attagtaactacaactgcaggatttttgaacagaggatcgctttcagcgcttcggcaaac
ggcaaattttatttggccgatatggagctgcagagaagcatcctcagagaggagtcaacg
tgtgtccttaagggtgacgagcccaccatactccttgtaaaagtgaagaaggaaccttgg
tgcagcttgctaaaagagaaaaaccatcatgtatcgtttgacttcgattacttggatgat
aatgaggaaagaagcccattctgcatagcatcaagtcctaagaaagtgtatcagattcct
ataggggtgtgcgaagaagaagaggaggaggaagaagaatcttcaaaagacagtgattca
gagagtgatttatcctcttgttaa
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