Pseudonaja textilis (eastern brown snake): 113448822
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Entry
113448822 CDS
T09005
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113448822 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113448822 (PATL1)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113448822 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
113448822 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
113448822
NCBI-ProteinID:
XP_026575417
Ensembl:
ENSPTXG00000009549
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MFRYQSLEDCPLDEDEEAFHNLAEEDEDIDQFNDDTFGAGAIDDDWQEAHERLAELEEKP
ASSTEQVDRRVTDEMDLLGDHEENLAERLSKMVIDNELEDPAIMQAVQTRPLVQQPGGLN
SSIWDGSSVLRRIRGPLLTQEVHSVSVLEYALPQRPSQSREEEQDVSERALPRRSCSPVI
GSPPVRAVPIGTPPKQPTMPNFNQQILCPKPVHIRVPIQQRYPSPFSERMSPNQLCSVTN
NSLLGHPFPPNVTPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLASMNPKLLQGR
VGQMMPPAGGFRAFFGTPATPSSQHHSPCPGAHLQNLRPRPQMFRPDTTHLHPQHRRLLH
QRQQQNRNQHRNLNGSAGDRGSHRNNHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTD
PYLDDFYYQNYFQKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKL
TVSSVNNPRKMIDAIVTLRGEEDETKEKQVRDKRRQTLFTIEKTYSLLLDVEDYERRYLL
SLEGDRLALMEERKQKICDMYDNLRGKVPNQERLSDDPFVQIMCIRKGKHLVARILPFLS
SEQAAEILMATARNLPFLIKKDAQDEVLPCLLRPFSLVLYHLPLGTVTSILQQLMNLPHR
GTVTTAANLHLTAVLQNKFGLSLLYLVLSRGEELQSSDSVTELTQDNQWMEVMIMAIREF
LRIPQAVLAKPVSTPSNLLSLFSRYVDQQKLNVLETKLQLIQGIR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctaccagtcccttgaggactgccctttagatgaagatgaagaagcctttcat
aatttggctgaggaagatgaggatatcgatcagttcaatgatgacacatttggagctggt
gcaattgacgatgactggcaggaagcgcacgaaagattggctgagctggaagaaaagcct
gcatcctcaacagagcaagtggatcgcagagttaccgatgagatggacctgttgggtgat
catgaggaaaacctggcagagaggcttagcaaaatggtgattgataatgaattggaagat
ccagccattatgcaggctgtgcagactcggcctctggtacagcagccaggtggcctcaat
tcaagcatctgggatggatcctcagttttgaggcgcattagaggaccactcctcactcag
gaagtgcactccgtctctgtgctggaatatgccctaccacagaggccttcacagtcccga
gaagaggagcaagatgtctcagagcgagcactacccaggcggtcatgctccccagttatt
ggcagccctcctgttagggctgttcctattgggacgcctcctaaacagcctaccatgccc
aacttcaaccaacagatcttatgtccgaagcctgtccacatcagagtcccaattcagcag
cgttatccaagtcccttcagtgagaggatgtctccaaaccagctctgcagtgtaacgaac
aactccctcttaggccatccgttccctcctaatgttacacctgttctcacccacctccag
agagcacagctactaggaggagcacaggcagggagaatgtctcccagccagtttgcacgg
gtctctggtcttgttggcagccctcttgcatccatgaatccaaaactgctccagggccga
gtaggacagatgatgcctccagctggtggctttcgtgccttttttgggacaccagctacg
ccatcatcacaacatcactccccatgtcctggagctcacttgcagaatctacggccacgg
ccacagatgttcaggccagatacaactcaccttcatccacaacatcgacgactcttacac
cagagacagcagcagaacaggaatcaacacaggaatctaaatgggtcagcaggggaccga
gggagccaccgaaataaccatcaggagcagatcaggaaggacccttatgctaatcttatg
ctgcaacgggagaaagattgggtatccaagatccaaatgatgcaactgcaaagcactgat
ccctatttggatgacttctactaccagaactattttcagaaactagaaaaattatctgca
gctgaggaagtgcatggcgacggtcctaaaaaggagcgtacaaaactaatcaccccacaa
gtggcgaaactagagcatgcctataagccagtgcagtttgagggctcactagggaagctg
accgtatccagcgtgaacaacccccgcaaaatgatagatgctattgtgactttaagagga
gaggaagatgaaactaaggagaagcaggttcgagataaaaggcgccagactctcttcact
attgaaaaaacatatagcctcctcttggatgtagaagactatgaaagacgctaccttttg
agcttggagggagacaggttggccttgatggaggagagaaaacagaaaatctgtgacatg
tatgacaatctgaggggaaaggtacccaatcaagaaagacttagtgatgacccttttgtg
cagattatgtgtatacgtaaaggaaaacatctagttgcacggatcctacctttcttgtcc
agtgaacaagcagctgagatactaatggcaacagccaggaatttgccctttctaatcaag
aaagatgctcaagatgaggtgcttccctgcctcttgaggcccttttcccttgtgctttat
catcttccattgggaactgttaccagcatcctacaacagctaatgaacctacctcaccgt
ggaacagtgaccacagctgccaacctccatctcacagcagttctccagaacaagtttggc
ctctctctgctatacttggtcttaagtcgaggagaggagttgcagagttcagattctgtc
acagaactcacacaagataatcagtggatggaagtgatgatcatggcaattagggagttt
cttcgaatccctcaggcggtcttggctaagccagtatctactccctctaatcttttatct
ctcttctctcgctatgttgatcaacaaaagctgaatgtgctagagacaaaattgcagttg
atccaaggaatacggtag
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integrated database retrieval system
