Pseudonaja textilis (eastern brown snake): 113449135
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Entry
113449135 CDS
T09005
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
ptex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113449135 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113449135 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113449135 (PRPF19)
04121 Ubiquitin system [BR:
ptex04121
]
113449135 (PRPF19)
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113449135 (PRPF19)
Enzymes [BR:
ptex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113449135 (PRPF19)
Spliceosome [BR:
ptex03041
]
Complex B
Other components
Prp19 complex
113449135 (PRPF19)
Complex C
Prp19-CDC5 complex
113449135 (PRPF19)
Ubiquitin system [BR:
ptex04121
]
Ubiquitin ligases (E3)
U-box type E3
113449135 (PRPF19)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
113449135 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Vps41
U-box
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
PROPPIN
eIF2A
Beta-prop_Nup120_160
RMC1_N
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Ge1_WD40
zf-Nse
Beta-prop_DCAF12
Beta-prop_LRRK2
Nucleoporin_N
DUF1830
Cep57_MT_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
113449135
NCBI-ProteinID:
XP_026575914
Ensembl:
ENSPTXG00000011861
UniProt:
A0A670YZS2
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MSLICSISNEVPEHPCLSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLLDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIIPQAIPSSQPNPMGAGEPMDLGELAGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELNRYRQVASHVGLHSASIPGILALDLCPSDSNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVSGTSCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCALTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQVFICKQWTEVLHFTEHSGLTTG
VAFGHHAKFLASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcatatgctccatttctaatgaggtaccagaacatccttgtctgtctccagtc
tcaaaccatgtttatgaacgaagactaattgaaaaatatattgcagagaatgggacggat
ccagtgaataaccagccactgtctgaggaacagctgctagatatcaaagttgcccaccca
attcggcctaagcctccttctgctaccagtattccagctatcctgaaggcactacaagat
gaatgggatgctgtcatgctacacagtttcactttgcgccagcagctccagactacacgc
caggaactttctcatgcactataccaacatgatgctgcgtgccgtgtcattgctcgtctc
accaaagaggtgactgctgcaagagaagctttggcaactctgaaaccccaggctggcctc
attattccccaagctataccctcttcacaaccaaatcctatgggtgctggtgaaccaatg
gatctaggagagttggcaggaatgaccccagaaattatccagaaacttcaagacaaagcc
acagtgctgaccacagagcgcaaaaagagggggaagactgtgccagaggaactggtgaaa
ccagaagaacttaatagataccggcaggtggcttcacatgtgggattgcacagtgccagt
attcctggcatccttgctcttgatctgtgtccttctgacagcaacaagatcctcacaggt
ggggctgataaaaatgttgttgtctttgacaagagttcagaacagatcctggccaccctg
aaaggtcacacaaagaaggtcaccagcgtagtgttccatccatctcaggaactggtgttc
tcagcatctccagatgctactatccggatttggtcagtgtctggcacttcctgtgtgcag
gttgtacgagcccatgaaagtgctgtcacagggctgagtcttcatgcaactggcgattat
cttttgagctcttctgatgaccagtattgggctttctctgacatccagactggccgtgtt
ctcaccaaggtcacagacgaaacttctggctgtgctctcacctgtgcccagttccatcct
gatgggcttatttttgggacaggaacaatggactcccagattaaaatctgggacttaaag
gaacggactaatgtcgcaaacttccctggacactctggtcccattactagcattgccttc
tctgagaatggctactacttggccactgctgctgatgattcctcagtcaaactctgggat
ctccgcaagctgaagaatttcaagacgctgcagttggataataactttgaggtgaagtcc
ctcatctttgatcagagtggtacttatctggccctgggtggtactgatgtccaagtattc
atctgtaaacaatggacagaagttcttcatttcacagagcacagtgggctgacaacagga
gtagccttcgggcaccatgctaagttcctcgcttccacaggcatggacagaagcctgaaa
ttctacagcctgtaa
DBGET
integrated database retrieval system
