Pseudonaja textilis (eastern brown snake): 113449681
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Entry
113449681 CDS
T09005
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptex03021
]
113449681 (TAF1C)
Transcription machinery [BR:
ptex03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113449681 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
113449681
NCBI-ProteinID:
XP_026576573
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAAFPAALLPGLFRAGPPGRDGLEAGLRVGGWGQCGQLGVAAGGPGAPPLFVPHRLRKAR
ESWLPTEAAPLPLKPPGAAPPIEDASAGPALSALGSQLGRLFLDEPEAAFGATARLLHEH
VYLGDSTDWRRAGGVCGMTRCLRALEGRTGGGSASRPLSGVASLCRDWLSELPLKLVAEW
LHEDLAERRRRLAFDETPTGGALAWLPDGPRGEPPRRGCLVFPAGEAADRLCFQEAALRP
AASGALRPQLRGGPIQFTLKGAVQQVSAAHLEGSDFLGVRSAHFCGAWRRQRGRAPVPLQ
VVCTEAPCSSIAVSPHLPGELSLCTLEGELYLWNVETGLRRLHRDRHNLFFRDLSSWRWS
EFSAHPRVLTFADRTGLKGLDQRVSSGGHFELFKVGAEAGCQRGERLLLSKYLGHSEPFH
HLVATQFSVFVLDERFPLVPVLSWEHMMQRPPIYAHLVPARPPQTSHKVLLGAHHSQEML
LLQYSGGHSFPCQLQGAPQKLPSIRDCLPHFPVQVPARQRALSRRLSVPTAGIAAAPGQR
EGIQTLLVFQLSGAGDLFYQALLPEASGEEAEGQAPSLADSGAAVVGRPHQDSVSPDGAK
TACSPAAAALYRRWLRAWKRTAPPAQDRQCPPATLHQGCLFTHQELRETGGSSPSSQQAS
RRLHRAMREGHLSWGEESGVPVPPAPQGPLGELGQRLAASWVGDWVTWWLERLGSTKARR
QQELREQRRRAKRRRGTQSLSGSFTSSTSYQSEPSDWSGDRSHLAPVTGPALPAEPPAQA
PVPLLPSSQEGSPGLLSSQSLSARGIPRERRQTLRRYLAVLDQPPEPPEDDLPTSQASAL
GSSQRGPFSSQGPQPKRARMGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttccccgccgcgctgctgccggggctgttccgcgcggggccgcccgggcgc
gacggtctcgaggccgggctgcgggtgggcggctggggccagtgcgggcagctgggcgtc
gcggcgggcggccctggagcgcctccgctcttcgtgccccaccgcctccggaaggcgcgg
gagagctggctgcccaccgaggccgccccgctgccgctgaagcccccaggagcggcgccc
ccgatcgaggacgcgtccgccgggccggccctgagtgcgctgggctcgcagctggggcgg
ctcttcctggacgagccggaggcggccttcggggccacggcccggctgctgcacgagcac
gtctacctgggggactcgacggactggaggagagccggaggcgtctgcgggatgacccgc
tgtcttcgcgccctggaaggccggacgggaggcggcagtgcctcgcggcctctctccggc
gtggcctcgctgtgccgcgactggctgtccgagctgcccctgaagctggtggccgagtgg
ctccacgaggacctggccgagcggcggcggcgactggccttcgacgagactcccaccggc
ggggccttggcctggctgcctgacggcccccgcggcgaacccccacgccggggctgcctg
gtgttcccggccggggaggccgcggaccggctctgcttccaggaggcggccttgaggcca
gcggccagcggcgccctgagaccccaactccggggcggccccatccagttcacgctcaag
ggagcagtgcagcaagtgtcagctgcgcacctggagggcagcgacttcctgggggtccgc
tcggcccatttctgtggggcctggaggcggcagcgtggaagggcccctgtccctctgcag
gtggtttgcacagaagccccgtgctcttccatcgcagtcagcccccacctacctggcgag
ctgtccttgtgcaccctggaaggggagctgtacctctggaatgtggagacagggctccga
cggctgcaccgtgaccgccacaatctcttcttccgggacctttcctcctggcgctggagc
gagttttccgcccacccacgagtgctgacttttgccgaccgcaccggcctgaagggcctc
gaccagagggtgtcctccgggggccacttcgagctcttcaaggtgggggctgaagccggc
tgccagcgtggggaacggctgctcctctccaagtacctgggccattcggagcccttccac
cacttggtggccacacagttttcagtctttgtgctggatgaacgcttccccctggtgccc
gtcctgagctgggagcacatgatgcagcggccgcccatctacgcccacctcgtacctgcc
aggcctccacagaccagccacaaggtgctcctgggcgcccaccactcccaggagatgctc
ctgctgcagtactcaggtggccacagcttcccttgccagctccagggtgcgccccagaag
ctgccatccatcagggactgcctgccccacttccctgtgcaggtgcctgcgaggcagagg
gccctcagccggcgtctctcggtccccacagcaggcattgcagcagccccgggccagagg
gagggcatccaaacgctgctggtcttccagctttccggggctggggacctcttctaccag
gcgctgctcccagaggccagtggggaagaggccgaggggcaggctccctccctcgcggac
tctggagctgctgtggtgggcaggccccaccaggactctgtttctccagacggagccaag
accgcttgtagcccggcggctgcagccctgtaccggcgctggctgagggcctggaaacgg
accgccccacctgcccaggaccggcagtgccctccagccacgctccaccagggctgcctc
ttcacccaccaagagttgagggaaaccgggggcagctccccgtcctcacagcaggcttcc
cgccgcctgcacagggccatgcgggaagggcacctctcctggggggaggagagtggggtc
cccgtgccccctgccccccagggccccctgggggagcttggccaacgactggcggcttcc
tgggtgggtgactgggtgacctggtggctggagaggctgggctccaccaaggcccgacga
cagcaggagctgagggagcagcggaggcgagccaagcggcgcagggggacgcagagcctc
tccggcagcttcacctcctccaccagctaccagtcggagcccagtgactggtcgggggac
cggtcccaccttgccccagtgactggtcccgccctgcccgcggagccccccgcccaggct
ccggtccctctgctgcccagttcccaggagggctccccaggcctgctctcctcacagagc
ctgagtgcccggggcatcccccgcgagcgtcgccaaaccctgcgcaggtacctggctgtg
ctggaccagcccccggagccccccgaggacgacctgcccaccagccaggcttcggccctg
ggcagcagccagcgggggcccttctcttcccagggcccccagcccaaacgggcccgcatg
ggcttctga
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