KEGG   Pseudonaja textilis (eastern brown snake): 113449952
Entry
113449952         CDS       T09005                                 
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113449952 (SMARCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptex03021]
    113449952 (SMARCC1)
   03036 Chromosome and associated proteins [BR:ptex03036]
    113449952 (SMARCC1)
Transcription machinery [BR:ptex03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     113449952 (SMARCC1)
Chromosome and associated proteins [BR:ptex03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    113449952 (SMARCC1)
   PBAF complex
    113449952 (SMARCC1)
   GBAF(ncBAF) complex
    113449952 (SMARCC1)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 SpeFL Raftlin
Other DBs
NCBI-GeneID: 113449952
NCBI-ProteinID: XP_026576869
LinkDB
Position
Unknown
AA seq 915 aa
MRGARKVGGAGPRRRRRRRRGRPGRTMAAASASVTAASSPVSGPGTVVGGSGPGSASSSS
SSSSFSSAGPLSLSRRKDGGPAGKFWESSDTASQLEAARAWLAKHYKKYVQADAPTNKTL
AGLVSQLLQFQEDAFGKHVANPAFTKFPAKCFLDFKAGGTLCYILGAAYKYKNEQGWRRF
DLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPSIYLIPDIELKVANKLKDIVKRHQGTVTD
DKSKATHHIYPVPTSLDEDEWLRPVMRKDKQVLVHWGYYPDRFTEQPFNLKKDSENTPVK
GGTVADLDEQDDETMTAGAKEDEDPNKGDQGRSLDAGEDNVTEQTNHIIIPSYASWFDYN
CIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCA
VMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHLRTPQIPASQQ
MLTFPEKNKEKPMDLQNFGLRTDIYSKKTLAKSKSANAGREWTEQETLLLLEALEMYKDD
WNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAF
LASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHIRKVQEAARVSGKVDPTYGLESSC
IAGTAPDEPEKMDGAQEDKMETDMDDAQADKVKVETKGENEIDPNKLPEGDEERITEKEQ
DSDVSQDSKQDDKDADEADKENFDGGKEKDGGGGGKRRVEPELSEGNVATAAAAALASAA
TKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEAEAAGHSAVVLL
GGEAAADDGAAAKELIGGVEGQAGMGAPPAAPRLALLALLLAGQSRRKPLIHLVVRPGGQ
KLQSEMDSWIPMGRS
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgcgcggagcgaggaaagtgggcggcgcggggccccggcggcggcggcggcgacggcgc
ggtaggcccggcaggacaatggcggcggcctcggcctccgtaacggcggcctcgagtccc
gtgtcggggcctggaaccgtcgtcggaggcagcgggcccggttcggcttcttcttcttcg
tcgtcgtcgtcgttttcctccgccggccctttgtcgctttcccgccggaaagacggaggc
cccgccgggaaattttgggaaagctccgatacagcttcgcaattggaagccgcccgggct
tggctggctaagcattacaagaagtatgtccaggccgacgcaccgaccaataaaaccctg
gccgggctggtgtcccaattgctgcagttccaggaagatgccttcggaaaacatgtggcc
aatcccgccttcaccaagtttccggccaagtgtttcctggatttcaaagccggagggacc
ttgtgttacatccttggggccgcttacaagtacaagaacgagcaagggtggaggcgattc
gacttgcaaaacccttcacggatggaccgaaacgtggaaatgttcatgaacattgagaaa
acattagtgcagaataactgtctgagcagaccaagcatctacctcattccggacattgag
ctgaaagtggctaacaagctcaaagacattgtcaaacgccatcaggggacggtcacggat
gacaagtcgaaggccacacatcatatataccctgttcctacctcactggatgaagatgag
tggctgagaccggtgatgagaaaagacaagcaagtcctggtgcattggggttattaccca
gacagattcactgaacagccgttcaatctgaagaaggacagcgaaaacacaccagtcaaa
ggaggtaccgtcgcagatcttgatgaacaagatgatgagacgatgacggccggagcgaag
gaagatgaagaccccaacaaaggggaccagggacggtccctcgatgccggagaagacaac
gtcaccgaacagaccaaccacatcataatccccagctatgcctcctggttcgactacaat
tgcatccatgtcatcgaacgccgggcgcttcccgaattttttaacgggaaaaacaaatcc
aagactccagaaatatacttagcttaccgcaatttcatgatcgacacctaccggttgaac
cctcaggaatatttgaccagcacggcctgtcgaagaaacttaactggggacgtttgtgcc
gtgatgagggtccacgcctttctggagcagtggggcctgatcaattaccaagtggatccg
gaaagccggccgatggccatgggaccaccgcccaccccccacttcaacgtgctggccgac
accccatcaggactcatgccgctccacctacgcacccctcagattcctgcttcccaacaa
atgctgaccttcccggagaaaaacaaggagaaaccgatggatctgcagaattttggcctc
cgcacggacatctactccaagaaaactttagccaagagtaaaagcgccaacgctggccga
gaatggacagaacaagagactctgcttctacttgaggcattggagatgtacaaggacgac
tggaataaagtctccgagcacgtcgggagtcgaacccaggatgagtgcatcctccatttc
cttagactccccattgaagacccttacctggagaactcggatgcctcccttggacccctg
gcctaccagcccgtccccttcagccaatccggcaatccggtcatgagcaccgtggccttc
ctggcctcagtggtggatccacgggtggcttcggccgctgccaaagccgctttagaggaa
ttttcccgcgtccgagaagaagtccctctggagctggtggaggcccacatcaggaaggtc
caagaagcggctcgtgtttcagggaaagtagaccccacttacgggctcgagagcagctgc
attgccgggacggcccccgatgagccggagaaaatggatggagctcaggaggacaagatg
gagaccgacatggacgacgcccaggcagacaaagttaaggttgaaaccaaaggagagaat
gaaattgaccccaacaagttaccggaaggagacgaggagagaatcaccgaaaaagaacaa
gatagtgatgtgtctcaagattcaaaacaagacgacaaggacgccgacgaggccgacaag
gagaacttcgatggcggcaaagagaaggacggcggtgggggcgggaagcgccgtgtcgag
cccgaactctccgaagggaacgtcgctacagccgcagctgccgctttggcgtcggctgcc
accaaagccaagcatctggccgccgtcgaggaacggaagatcaaatctctggtggctctc
ctggtggaaacgcagatgaaaaagctagagatcaaacttcgtcattttgaagagctggaa
acaatcatggaccgagagaaagaggcggaggcggctggccactcggcggtggtgctgctt
ggaggcgaggcggccgcggatgatggggcggcggcgaaggagctaatcggcggcgtggaa
gggcaggcagggatgggggcgcccccggcggctccccggctggccctcctggctttgctg
ctggcgggtcaaagccgccggaagccgttaatccacttggtcgtccggccaggaggtcag
aaactgcagtcagaaatggattcctggatccccatggggagatcctga

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