Pseudonaja textilis (eastern brown snake): 113450011
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Entry
113450011 CDS
T09005
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03030
DNA replication
ptex03420
Nucleotide excision repair
ptex03430
Mismatch repair
ptex03440
Homologous recombination
ptex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113450011 (RPA1)
03420 Nucleotide excision repair
113450011 (RPA1)
03430 Mismatch repair
113450011 (RPA1)
03440 Homologous recombination
113450011 (RPA1)
03460 Fanconi anemia pathway
113450011 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptex03000
]
113450011 (RPA1)
03032 DNA replication proteins [BR:
ptex03032
]
113450011 (RPA1)
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113450011 (RPA1)
Transcription factors [BR:
ptex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113450011 (RPA1)
DNA replication proteins [BR:
ptex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113450011 (RPA1)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113450011 (RPA1)
MMR (mismatch excision repair)
113450011 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
113450011 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
113450011
NCBI-ProteinID:
XP_026576944
Ensembl:
ENSPTXG00000011486
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAAPVARLSEGSIAAMLLQAEPVGRPVLQLITIRPISTGNGPPRYRMLMSDGVNTLSSFM
LATQLNPLVDDQSLTANAICQINRFIVNTLKDGRRVVVLMEMEVLQPGHAVPAKIGNPVP
YTEGTGQAGRQPPGPGPTTTPFQSKPAGLPSGAPDAESLAKAPPGPSKWLGNAGSSGILS
TPGGSQVKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIEMVDESGEIRA
TAFNDQVDKFFPLLELNKVYYFSKGNLKTANKQYSSVKNDYEITFSNETSVVPCEDAEHL
PSVQFDFVPIGNLEGASKDSLVDVIGVCKSYEDAQKVTIKSSNREVSKRELHLMDTSGKT
VTVTLWGVDAEKFDGSRQPVVAIRAARVSDFGGRSLSVVSSSTLLVNPDCPQAFKLRGWF
DSEGQHLESVSISSGRGGPAAGGSNTNWKTLQEAKSENLGQGDKADYFSCVGTVVYLRKE
NCMYQACPTPECNKKVIDEQNGLFRCEKCDREFPNFKYRMILSANIADFQDNQWVTCFQE
SAEALLGQNAAYLGELKEKNEHAFDEVIQSANFTSHEFRIRVKLETFNDESRLKATAVEV
KPINHKEYCQRLILNIRRNAARLG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagtggcgaggctgagcgagggctccatcgcggccatgctgctgcaggcg
gagccggtggggaggccggtgctgcagctgatcaccatccgccccatctctacgggaaac
gggccccctcgctaccggatgctgatgagcgatggcgtcaacaccctctcctcttttatg
ctagccacacagctgaaccctctggtggacgaccagagcttgaccgccaatgccatttgc
cagattaaccgcttcattgtgaacactctgaaggatggaaggcgagtggtggtcctgatg
gaaatggaggttctgcagccgggtcatgccgtccctgccaagattggaaatccggtgccc
tacacggaaggaactggacaagcagggaggcagcccccgggccccggcccaaccacgacc
cctttccagagcaagccagcgggactcccgagtggcgctccagacgcagagtctttggcg
aaggctccccccggcccttccaaatggctggggaacgcaggcagctccggcatcctgagc
actccggggggctctcaggtcaaagtggtgcccatcgccagcctgaacccttaccagtcc
aagtggaccatttgtgcccgggtgacccagaagggccagatccgcacctggagcaactcc
cggggcgaagggaagctcttctccatagagatggtggatgagagcggggagatccgagca
acggccttcaacgaccaggtggacaagttcttccctctcctggagttgaacaaggtgtac
tacttttccaagggcaacctgaagacggccaacaagcagtactcctccgtgaagaacgac
tacgagatcaccttctccaacgagacgtccgtcgttccctgcgaggatgccgagcacctg
ccctcggtgcagtttgacttcgtgcccatcgggaacttggaaggcgccagcaaggactct
ctcgtggacgtgattggggtctgcaagagctacgaggacgcgcagaaggtcaccatcaag
tcttccaaccgggaggtctccaagagggagctgcacctgatggacacgtcgggcaagacc
gtgacggtgactctctggggcgtggacgcggagaagtttgatggctctcggcagccggtg
gtggccatccgggcggcccgagtctcagactttggcgggcggagcctctccgtggtttcc
tccagcaccctcctggtgaacccagattgcccgcaggccttcaagctgcggggctggttt
gactcggaggggcagcacctggagtccgtgtccatctcttcggggcggggggggccggca
gccggggggagcaacaccaactggaagaccctgcaagaggccaagtcggagaacctgggc
caaggtgacaaggccgactacttcagctgcgtgggcacggtggtgtacctgcgcaaggag
aactgcatgtaccaggcctgccccaccccggagtgcaacaagaaggtgattgacgagcag
aacggcctcttccgctgcgagaagtgcgaccgggagttccccaacttcaagtaccgcatg
atcctgtcggccaacattgcggacttccaggacaaccagtgggtgacctgcttccaggag
tctgcggaggccctcctggggcagaacgcggcctacctgggggagctgaaggagaagaac
gagcacgccttcgacgaggtcatccagagcgccaacttcacctcccacgaattccggatc
cgagtcaagctggagacgttcaatgacgagtcgcgcctgaaggccacggccgtggaggtg
aagcccatcaaccacaaggaatactgccagaggctgatcctgaacatccgcaggaacgcc
gcccggctcggctga
DBGET
integrated database retrieval system
