Pseudonaja textilis (eastern brown snake): 113450028
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Entry
113450028 CDS
T09005
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113450028 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113450028 (PRPF8)
Spliceosome [BR:
ptex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113450028 (PRPF8)
Complex C
U5 SnRNP specific factors
113450028 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PRP8_domainIV
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
113450028
NCBI-ProteinID:
XP_026576963
Ensembl:
ENSPTXG00000011585
LinkDB
All DBs
Position
Unknown
AA seq
2236 aa
AA seq
DB search
MAGVFPFRGPCPPMPTPLTPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDLATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEGGALAVVPGRLRSDPPALSSLLASVNVASLTQSEIRDIILGMEISAP
SQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAIS
AANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQV
KEIRCIVMVPQWGTHQTVHLPGQLPQHDYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKV
MAENPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERV
QMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFAL
LQEGEVYSADREDLYA
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtcttccccttccggggcccttgcccgcccatgcctacccccttgactcca
ttgcctgactacatgtcggaggagaaactgcaggagaaagcccgcaaatggcagcagctg
caggcaaagcgctacgctgagaagaggaaatttggctttgtggacgcccagaaggaggac
atgccgcctgagcacgtgaggaagatcatccgtgatcacggagacatgaccaacaggaaa
ttccgtcacgacaagcgagtgtatttgggggccctgaagtacatgccgcacgcagttctg
aagctgctggagaacatgccgatgccctgggagcagatccgggacgtgccggtcctctac
catatcaccggggccatttccttcgtgaacgagatcccgtgggtgatcgagccggtgtac
atcgcccagtgggggtccatgtggatcatgatgaggcgggagaagagggaccggcggcat
ttcaagcgaatgcgcttcccgccctttgatgacgaagagccccccctcgactacgcggac
aacatcctggatgtggagcccctggaggccatccagctggagctggacccagaggaagac
gctcccgtcttggactggttctacgaccaccagcccctgaaggatagccgcaagtacgtc
aacggctccacctaccagcgatggcagttcaccctccccatgatgtccaccctctaccgc
ctggccaaccagctcctcacggatctcgtggacgacaactacttctacctgttcgacctg
aaggccttcttcacctccaaggccctcaacatggccatcccgggggggcccaagtttgag
cccctggttcgagacatcaacctgcaggacgaggactggaacgagttcaatgacatcaac
aagatcatcatccggcagcccatccggaccgagtacaagatcgccttcccctacctctac
aacaacctgccccaccacgtccacctcacctggtatcacacccccaacgtggtcttcatc
aaaacggaggatccagacctgccagctttctactttgatcctctcattaaccccatttcg
cacaggcattcggttaagagccaggagccgctgcctgatgacgatgaggagtttgagctg
ccggagtttgtggagcccttcctcaaggagaccccgctctacacggacaacacggccaac
ggcatcgccctgctctgggcaccgcggccctttaacctgcgctctggccggacccggcgg
gccctggacatccctctggtcaagaactggtaccgagagcactgccccgccgggcagccc
gtgaaggtgcgcgtctcctatcagaagctcctgaagtactacgtcctgaacgcactcaag
cacaggccccccaaggcacagaagaagaggtacctcttccgctccttcaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctcaaccttctcatccaccgcaagaacctcaactacctccacctggactac
aacttcaacctgaagccggtcaagaccctcaccaccaaggaaaggaagaagtctcgcttc
ggcaacgccttccacctgtgccgggaggtgctgcgtctcaccaagctggtggtggacagc
cacgtccagtacaggctaggaaacgtggacgccttccagctggccgatgggctccagtac
atcttcgctcacgtggggcagctgactgggatgtaccggtacaagtacaaactcatgagg
cagatccggatgtgcaaagacctcaagcacctcatttattaccgcttcaacacagggcca
gtcgggaagggccccggctgtggcttctgggccccgggctggcgggtgtggctcttcttc
atgagagggattacccctctgctggagcgctggctcgggaacctcctggccaggcagttt
gaaggccgccactcaaagggggtggccaagacggtcaccaagcagcgggtggagtcccac
ttcgacctggagctgcgggcagcggtgatgcatgacatcctggacatgatgcccgagggg
atcaagcagaacaaggcccggaccatcctgcagcaccttagcgaagcctggcggtgctgg
aaggccaacatcccttggaaggtcccggggctgccaactcccatcgagaatatgatcttg
cggtacgtgaaggccaaagcggactggtggaccaacacggcgcattacaaccgggagcgc
atccgccgcggggccactgtggacaagacagtctgcaagaagaacctgggccgcctgact
cgtctctacctgaaggccgagcaggagaggcagcacaactacctgaaggatggcccgtac
atcactgcggaggaggctgtggccgtttacaccaccacggtgcactggctggagagccgg
cgcttctcccccatcccttttcctccgctctcctacaagcacgacaccaagctcctcatc
ttggccctggagaggctgaaggaggcctacagtgtgaagtcccgcctgaaccagtcgcag
cgggaggagctgggcctgatcgagcaggcctacgacaacccccacgaggccctttcacgc
atcaagcggcatttgctgacccagcgagccttcaaggaggtgggcatcgagtttatggac
ctctacagccacctggtccctgtctacgacgtggagcccctggagaagattacagatgcc
tacctggaccagtacctgtggtacgaggcggacaagaggcgtctcttccctccatggatc
aagccggctgacacagagccccctccgctgctggtgtacaagtggtgccagggcattaac
aacctgcaggacgtgtgggagaccagcgaaggggagtgcaacgtgatgctcgagtcccgc
tttgagaagatgtacgagaagattgatttgacgctgctgaacaggctgctgcgcctcatt
gtcgaccacaacatcgccgactacatgacagccaagaacaacgtggtcatcaactacaag
gacatgaaccacaccaactcctacgggattatccggggcctgcagttcgcctccttcatt
gtccagtactacgggctggtgatggacctgctggtgctcggcctgcaccgggccagtgag
atggccggccccccgcagatgcccaatgacttcctcagcttccaagacctggccacagag
gtggcccacccgatacgcttgttctgcagatacatcgaccgcatccacatcttcttcagg
ttcaccgcggatgaagccagggacctgatccagcgctacctgaccgagcacccggatcca
aacaacgagaacattgtgggctacaacaacaagaagtgctggcctcgtgatgcccgcatg
cgcctcatgaagcacgatgttaacctgggccgggccgtcttctgggacatcaagaaccgg
ctgccgcgctccgtcaccaccgtgcagtgggagaacagctttgtctccgtgtacagcaag
gacaacccgaaccttctcttcaacatgtgcggctttgagtgccgcatcctccccaagtgc
cggacaagctacgaagagttcacccacaaggacggcgtgtggaacttgcagaatgaggtg
accaaggagcgcaccgcacagtgtttcttgagagtggatgatgagtccatgcagcggttc
cacaaccgggtcaggcagatactgatggcctcgggctccaccaccttcaccaagattgtg
aacaagtggaacacggccctgatcggcctgatgacctacttccgggaggccgtggtgaac
acccaggagctgctggacctgctggtgaagtgtgagaacaagatccagactcggatcaag
atcggcctgaactccaagatgcccagccgcttcccacccgtggtcttctacacccccaag
gagcttggggggctgggcatgctgtccatgggccacgtcctgatcccgcagtctgacctc
aggtggtccaagcagacggacgtgggcatcactcacttccggtccgggatgagccacgag
gaggaccagctgatccccaatctgtaccgctacatccagccgtgggagagtgagttcatc
gactcccagcgggtgtgggccgaatatgccctcaagcggcaggaggccattgcccagaac
aggcgcctgaccctggaggacctggaggactcgtgggacagaggcatcccgcggatcaac
accctcttccagaaggaccggcacacgctggcctacgacaaaggctggagagtcaggacg
gatttcaagcagtaccaggtgctgaagcagaaccccttctggtggacccaccagcggcac
gatgggaagctctggaacctgaacaactaccgcacggacatgatccaggcgctgggcggg
gtggagggcatcctggagcacacgctcttcaagggcacctacttccccacctgggagggg
ctcttctgggaaaaagccagcggcttcgaggagtccatgaagtggaagaagctgaccaat
gcccagcgctcgggtctcaaccagatccctaaccggaggttcaccctctggtggtctccc
accatcaaccgggccaacgtgtacgtgggcttccaggtgcagctggacctgacgggcatc
ttcatgcacggcaagatccccacgctgaagatctccctgatccagatcttccgagctcac
ctgtggcagaagatccacgaaagcatcgtcatggacctctgccaggtgtttgaccaggag
ctggacgccttggagattgagacggtgcagaaggagaccatccaccccaggaagtcttac
aagatgaactcctcctgcgcggacatcctcctcttcgcctcctacaagtggaacgtctcc
cggccctccctgctggcagactccaaggacgtgatggacagcaccaccacccagaagtac
tggatcgacatccagctgcgttggggggactacgactcacacgacatcgagcgctacgcc
cgggccaagttcctggactacacgacggacaacatgagcatttacccctcccccaccggg
gtcctcattgccattgacctggcctacaacctgcacagcgcctacgggaactggttcccc
ggaagcaagccgctgatccagcaggccatggccaagatcatgaaggccaaccccgccctg
tacgtgctgagggagcggatccgcaagggcctgcagctttactcctcggagcccaccgag
ccctacctctcctcgcagaactacggggagctcttctccaaccagatcatctggtttgtg
gacgacaccaacgtctacagggtcaccatccacaagacctttgaaggaaacttgaccacg
aagccgatcaacggggccatcttcatcttcaaccctcggaccgggcagctcttcctgaag
atcatccacacgtccgtctgggctgggcaaaagcgtttgggccagctggccaagtggaag
acggcggaggaggtggcggctctgatccgctccctgccggtggaggagcagcccaagcag
atcatcgtcacccggaagggcatgttggaccccttggagggaggagccctggccgtggtg
cccgggaggcttcgatctgaccccccggccctgtcctcgctcttggccagtgtgaacgtg
gcttccttgacccagtccgagatccgggacatcatcctcggcatggagatctcggccccc
tcccagcagcggcagcagatcgcggagatcgagaagcagaccaaggagcaaagccagctg
acggccacccagacgcggaccgtcaacaagcacggcgacgagatcatcacctccaccacc
agcaactacgagacccagaccttctcctccaagaccgagtggcgggtcagggccatctct
gcagccaacctgcacttgcgcaccaaccacatctacgtctcctcggacgacatcaaagag
accggctacacctacatcctgcccaagaacgtcctgaagaaattcatctgcatctccgac
ctgcgggctcagattgcagggtacctgtatggggtgagtcccccagacaacccccaggtg
aaggagatccggtgtattgtgatggtgccccagtggggaacccaccagaccgtccacctc
cccggccagctgccccagcacgactacctcaaggagatggagcccctggggtggattcac
acccagcccaacgagtctccgcagctctccccgcaagacgtcaccacccacgccaaggtc
atggccgagaacccctcctgggacggggagaagaccatcatcatcacctgcagcttcacc
ccgggctcctgcaccttgacggcctacaagctgacccccagcggctacgagtggggccgg
cagaacacggacaagggcaacaaccccaagggctacctgccctcccactacgagcgggtg
cagatgctgctctcggaccgcttcctgggcttcttcatggtgccggcccagggctcctgg
aactacaacttcatgggtgtccggcacgaccccaacatgaagtacgagctgcagctggcc
aacccgaaggagttctaccacgaggtccatcgcccctcccacttcctcaacttcgccctc
ctgcaggagggggaggtctactcagcggaccgggaggatctctacgcctag
DBGET
integrated database retrieval system
