Pseudonaja textilis (eastern brown snake): 113450836
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Entry
113450836 CDS
T09005
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1
KO
K16741
alstrom syndrome protein 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptex03036
]
113450836 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptex03037
]
113450836 (ALMS1)
Chromosome and associated proteins [BR:
ptex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113450836 (ALMS1)
Cilium and associated proteins [BR:
ptex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113450836 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
113450836
NCBI-ProteinID:
XP_026577935
LinkDB
All DBs
Position
Unknown
AA seq
2789 aa
AA seq
DB search
MEATSQGSSQVPPIATTPPQPGLKEELLSQSSSETQISNTSGVSLGEAIRRRSLMTQDPE
AWYRLCAETDISNLVGWRPGQTPGGCNVTEFPTMEEGLLTPTVNFRRPQASGMTHSPVLE
MADSQLSPNLPLLTTNATQGQTFFNETVFQPTGLDFAPLRATPDVSTTAAERPLAHLLIG
QSVQLASQDVGPESSREASLSQHPLAFSLTVPNNTTLGSCLSQHPLIFPDLPVPAQSENR
PMLRADLRAKTLDPKEETSRRPLPPTWPNQPLATERLPDESWKATPGQDLFLLDNSLPAP
LLLDLLDDEMGLPKRGGFLSSEGSSCKSGSGKDPGENELQRLTVNVDLSESAPQLMLEPR
QSKGQTTPPPELARPLTEAAGKPWRRASDPGAFSANFSPALVSSGAHPFSSLDSSVIPER
SLAPTHQRAGEKFQSGAEEDQRKLTPALVGNKPRASSSFQPVPAAADVRERTDTGKDILT
SVSQNELTLSDGNVEREHRYTGISPFDEASFVTHLAHPIHHSTPGFWTTRSLNRDAPGTA
FPSRSGFQRPLSCLHEEMSKTSQAKACNSLTVEPRGNPCSFPTKESFTSRGAPGLPNEKS
DGFTVLQPLKGRIQSMPSLNFMEKVGAWHLSSSAERLPDVSAVPGLGTPAPGSGGVSPMR
KAYSAIADSLNRILLKQQSLADLKAASFYGPSSMIDLHSSPKEVPPPALPFTRSQSETSV
SALSREISRTDLGSETRPSDALQRADVCANVSTDSRLKPTVAAEEAALHRCYKAVPVFVT
ASSDEESVSTGSHSDPLIRSRRVAELLRGETSSLEGSKEKLGGPQEKTRELSGCGFRASQ
TRMDYFRELSPDHLNQGTDSRMDSCTDLRLSSRQSSRSSPALNKLQSSLEEELQASNYSE
LNIDERIPVYLHNLGIDQSPSSILTPFMPRGPMREIEFSPTDLRTLKASSDLSRLHLSED
SHSPKDATQLTFDSSLLGGPSLAGSTVVSDSSQPAKPSPQQTSDLQLSGSPWHPCAVTSP
RTTSVPESQSAPGSTKETQVIPGSPSSLERSTTRLSSPEDNLDPAKLGASRVKSGSSSQD
RDEKPASEGIRSSGTIPGGERDDSFPRSNIPEESQKLPAEVDSRPSSTKFRSRLSLSSSS
SGSLKPIDRDDLSGDPGSIQRSTLGIQRGWSWDEAMDKQEITGSLKWEDLQRVDFFAEEP
AVSRELRPGSQRANEDGGRMQPLARSDPEGCPRTAVNRNLPIPTGGSTDSQASPSSPTLQ
EIRSVSNTDDVSKLLRDFPRAEQKANGSHPKEIGGSQESAESSSVDSLGLRVKKLLQYGH
PAMHRTPRMEERDGSSAKEPSVSGTGSAFRRGDVGAQGSNNGSSMDSLAIRVQTLLEEEQ
PVLHATQILRSVEEEEEKARAWVKLKLATEPHYFIPELTEEDRQMIERMKREQLSTSGET
EHLEVKLQTWVKLKLATEPHYFIPELTEEDRQMIERMKREQLSTSGETEHLENQQWRSSF
RRLPNANPAATVEPGSLQKPRDHDLQMALQKYGLQLAEFSGENMEAATDGALTAEPEAEL
SHGAQIPDSGQRQPPPSNALDSKAHSHLPLEVHFQGASKAPAKEDGNVATPLDLSESSTS
VEAAIQITSITFASRRRSPSPASRPPRTLLADVPPRDPVSLETRSVNRERQKLGGSQLPS
YQARPSAGVASARASEKDVGSPPFGSTKVARDDPRQEVLGPSLEGSPRRGAELKDLDRQA
REDEQASDPGLAEQRRYAKTLDNIYADGSKMERPVASPPPKTGEVRPQNCSPTEAGGAPK
PLFPEGKEKTRRREDLSTSDSYLHKPRSGGSGSTLLQSASLDCISTAVPVSPTSPTRKAL
SGVHLTLSPKRVELDLSGPVDIGPEGREVEVLKPTSSGVSGLSLEATSKPLESKRKTQES
FYFPREASPQEVPKGARPALPHAQEPRASRDLGEVAPSPRDAGTRCWSARDRLKATASSQ
TEWGSSDAITQITTESPEKTTYSAEIFVTAENGEAPYPKGHKTPDEMMLSKISVSDGQSG
EKPLVLPYKPPGCSEVYYVPCGKGTLKLSRVRSETTVESSHSGSNDAVPPDFPPQVLGSR
KDHPSDMAIVRHKEGIYSKTAAPRVAWMEEKAGAAAPTVVGPRGGRNPSGSLRTSQPAYE
SDQPPLKSFLKDDPNPAPGNKALGQVDAASGGPAPSPQDLQPRKGILESSPSPRSALHPS
QRDECFIPLTGEVDYSFLEEIKSKQASRRDWAEAQTTSSGRASQLPPGSRSIKEKWVADL
PRGPSTHRSSPLDVLWAKYLERQNQQQQLKPIESNHKTQLSLVERLDRLARLLQNPLRHS
LALALEDQKEPRRRAARLGSPRGKKMAARKKAALRPSVETSEEALVGPRGAWPSKSRHPK
TGHGGAVEPGARNRDGGPASETPSETSSDLRPRRDASVATGVTSESEGTRLETESATATE
GSESASTINTARLIRAFGQERVEVSPKLSQLYSTIDLQKTRLESWPKRGRRAKGDGGGYP
KMVHLERKGNEAQPSPSSTSSDSASSLGSSHGPSLALSSKRMSHKAVQAGDFEIVNSATK
KHTRDVGLTFPTPTASQATLHGGSRSRAEQGLAQHHGLSAESEEQQKWQPGSFLEGRRPR
RSRSQWTQGVSWFVPARDLKPDALEEAGGGFPPGPVLAWSEPPPRGKPWREPLREQNWPE
RLGGLQVRLAAPARDVENEPPSLLGKMTLQESLAMHRPDFISSSGERLKRLKLLTEERKL
QSVFQEEREQLFNPPEAMRCGNIGGLADR
NT seq
8368 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgacttctcaggggagcagccaggtgcctccgatcgcaacgacgcccccgcag
cccggcttgaaagaagagctgctgagccaaagcagcagcgagacgcaaatctcaaacacc
agcggtgtgtccttgggagaggccattaggcggaggtctctcatgactcaggacccagaa
gcctggtatcgtctttgtgctgaaacggatatcagcaatctcgtgggttggaggccgggc
caaaccccaggcggctgcaacgtaacagaatttccgactatggaggaaggcctgctcact
cccaccgtgaattttagaagacctcaagcgtctgggatgacccactcccccgtcctggag
atggcggatagccaactttctcccaacctcccactgctgacgacaaacgccactcaaggc
cagactttcttcaacgagaccgtctttcagccgacaggcttggattttgctcccttgagg
gcaactccggatgtttccaccacagccgccgagagacccttggcacatttgctgatcggc
caaagcgtgcaactggcatcccaagatgttggcccagaatcctcccgggaggcatccctc
tcgcagcatcccctggctttcagcctcacggttcccaacaacaccaccctgggcagctgc
ttatcgcaacaccctctgatttttcctgatttgcccgtacctgcccagtcggagaatcgg
cctatgcttcgtgctgaccttcgtgccaaaaccctggaccccaaggaggagacttcacgt
cggccgcttccaccgacgtggccaaaccaacccctggccacggagcgtcttccggacgaa
agttggaaagctacgcccggccaggatttgttccttttggacaacagcctgccagctcct
ctcctcctcgacttgttggatgacgagatgggcttacccaagcgcggcggcttcttatct
tccgaaggttcttcttgtaaaagcggctcgggaaaggatccgggagaaaatgagcttcaa
cggctgacggtgaatgtggatctgtcagaaagcgcgccccaattgatgctagaaccacgc
cagtcgaaaggccaaaccacgcctccccccgagttggcccggcccttgacagaggcagcg
gggaagccctggagacgtgccagcgatccgggagctttctcagcaaacttttctcccgcc
ttggtgtcctccggagctcatccgtttagttcgctggattcttccgtgattcccgaaaga
tccctggcgccgactcaccagcgggcgggcgagaaatttcaaagtggggccgaagaagac
caacgaaaattgacaccggctctggtcgggaataaacctcgtgcttcgtcatccttccag
ccggtcccggcggccgcagatgtcagggagcggacggacaccgggaaagacatcctaacc
agcgtgagccaaaacgaactaacgctctctgacgggaacgtagagagagagcacagatat
acgggaatctctccttttgacgaggcgtccttcgttacacatctggctcacccgattcat
cattccacccctggtttttggacaaccagaagcttgaaccgcgacgcgcccggcacggca
ttcccatcccgatcaggattccaacgtcctctttcttgcttgcacgaagagatgtcaaag
acctcgcaggccaaggcgtgcaattctttgacggtggagcctcgtggaaacccttgctcg
tttcccacgaaggagagttttacgtcgcgtggcgccccgggcttaccaaatgaaaagagc
gacggttttaccgttctgcagcctctgaaaggccggattcagtccatgccttctctgaat
ttcatggagaaggtgggagcgtggcacctgagctcttcggctgagagactgcccgacgtg
tcagcagtacctggtttgggtacccctgcacctggctctgggggcgtctcccccatgcgg
aaggcctacagcgcaatcgccgattccttgaaccgcatcctgctcaagcagcagagtcta
gctgacctcaaagctgcctctttttatgggccgagctccatgatcgatcttcacagctcc
ccaaaagaggtccctccgcctgccttgccctttacccgctcgcagtcggaaacctcggtg
agcgccctcagccgcgagatttcgaggacggacctcgggagcgaaaccagacccagtgat
gctcttcagcgagcggacgtctgcgccaatgtttcaacggactctcggctcaagccgacg
gtcgcggcggaggaagccgcccttcaccgatgttacaaagctgtgcccgtctttgtaacg
gcctccagtgacgaggaaagtgttagtacggggagccattcggatccccttattcggagc
agaagggtggccgagctcctgcgaggggaaaccagctcgcttgaggggagcaaagaaaaa
ttgggtggcccccaagagaagacgagagaattgtcgggctgcgggtttcgtgccagtcaa
acgaggatggattattttcgagagctttccccggatcatttaaaccaagggaccgattcc
agaatggacagctgtacggatttgaggctgtcgtccagacagtcttccagatcttctccg
gctttgaacaagttgcagagcagtttggaagaggaattgcaagcttccaattacagcgag
ctcaatatagatgagagaataccggtgtacctccacaacctgggcattgatcagtcgcct
tcttcgattctgactccgttcatgcctcggggacccatgcgagaaattgaattctctccg
acggatctccggacgttgaaagcatcgtcggatttatcccgcctgcacctttcggaagac
tcgcactctccgaaagacgccacgcagttgaccttcgactcttcgctgctgggtggaccc
tctctggcaggatcgaccgttgtctctgactcgtcacaacctgccaagccttctccgcaa
cagaccagtgatctccagctgagcggctctccctggcacccttgtgctgtcacatccccg
cgcaccacctctgttcccgagtcccagtctgctcccggttcaaccaaagagactcaagtc
atcccaggatctccctccagcttggaaagatccacaacacgtctgtcgtcgccagaggac
aatttagacccggccaaactcggcgcgagtcgagtaaaatccgggtcttcgtctcaggac
cgtgatgagaagcctgcaagcgaaggaatccgatcttcgggcacaattcctggtggagag
agagacgattccttcccaaggtcaaacatcccagaagagagtcagaagcttccagcagag
gttgactccagaccttccagtacaaaattcagatctcgtttatccctctcttcttcttct
tccggttcgctaaaaccaatcgaccgcgacgatttatccggagatcctggatcgatccag
agaagcacgctaggcattcaaagaggctggtcgtgggatgaggccatggacaagcaggag
ataaccggtagcttaaaatgggaagatctgcagagggtggacttcttcgccgaggagcca
gcggtatctcgagagctcaggccgggatcccagagagcgaacgaagacggcgggaggatg
caaccccttgcgcgatccgatcccgaaggttgccccaggacggctgtgaatcggaatctc
cccattccaacaggcgggtctacagatagtcaagcaagcccttcttctccaaccctccaa
gagatccggtccgtttccaatacggacgacgtgtctaaactcttgagagatttcccgcga
gccgagcagaaagcgaacggaagtcatccgaaagagattggcggctcgcaggaaagcgcc
gagagcagcagcgtggactctctgggcctcagagtgaagaaacttctccagtatggacat
cctgcgatgcaccgaacgcctcggatggaggagcgcgatgggtccagtgcgaaagagccc
tctgtgtcgggcaccggctcagcgttccgcagaggggacgtcggtgcccaaggaagcaat
aacgggagcagcatggactcgttggcgatacgggtccaaaccctcctggaggaggagcag
cctgtgctgcatgcaactcagatactccggagcgtagaggaagaagaagagaaagcccgc
gcctgggtgaaactaaaactggctacggagcctcactacttcattcctgagctgaccgaa
gaagacaggcagatgatagaacggatgaagagagagcagctttcgacttctggagaaacc
gaacatctggaggtaaaactccaaacctgggtgaaactaaaactggctacggagcctcac
tacttcattcctgagctgaccgaagaagacaggcagatgatagaacggatgaagagagag
cagctttcgacttctggagaaaccgaacatctggagaaccagcagtggagaagcagcttc
cggagacttccaaacgccaacccggctgcaacagtagaaccgggctccttgcagaagcca
agagaccacgacctgcaaatggcccttcagaaatacggtttgcagctggccgagttctcc
ggggaaaacatggaggctgcgacggatggcgccttaacagccgagccggaggccgaactc
tcccacggtgcccagattcctgactccggccaacggcagccacctcccagtaacgccttg
gactccaaagcccattctcaccttcccttggaggtgcatttccaaggggcctcgaaggcc
cctgcgaaagaggacgggaatgtagcaaccccactggatctgtccgagagcagcacctcc
gtagaagcagctattcaaattacctctatcaccttcgcctctcggaggaggtcgccttct
cccgcttcccgccctccccggactctccttgccgacgttccccctcgcgatcccgtatct
ttggaaacccggtccgtgaaccgggaacgccagaagttgggtggctcacagctgccaagt
taccaagctcgcccttccgccggcgtcgcttccgctcgcgcttcagagaaggacgttgga
tctccaccctttgggtctaccaaggtggccagggacgacccccgtcaagaagttctgggt
ccttccctggagggatccccaagaaggggtgccgagctgaaggacctcgatcgccaggcc
cgcgaggacgagcaagcttccgatccaggtcttgccgagcagaggcgatacgcgaaaacg
ctggataatatttacgccgacggatctaaaatggaaaggccggtggcgtcgcctccgccg
aagacgggtgaggtgcgtccccagaattgctcgccaactgaggcaggaggcgctcccaag
ccccttttccccgaaggcaaagaaaagacgcggcgaagagaagatttgtctacttctgat
tcatatttacacaagcccagaagcggaggcagtgggagtactttgttacagtcggcttcc
ctcgattgtatttccacagctgtaccggtgtctcctacgtcgcccaccaggaaagccctt
tccggtgtccaccttactctctctccaaagcgggtggaattggacctctcgggaccagtg
gatattggtccggaagggagagaggtcgaggttcttaagccaacctcttcaggtgtttcc
ggtctgtccttagaagctacctccaagcccctagaatctaagcgaaagactcaagaatcc
ttctacttcccccgagaggcatcccctcaagaggttccgaagggggctagaccagcccta
ccacacgctcaagagccccgggcaagccgagatctcggtgaagtagccccgtccccaaga
gacgccgggactcggtgttggagtgcaagggaccgcttgaaggctacggcttcttcccaa
accgaatgggggtcttcggatgccatcactcaaatcacaaccgaaagcccggagaagacc
acctattctgccgaaatctttgtcacagctgagaatggagaagctccttatccgaagggt
cacaaaacccctgacgagatgatgctctccaaaatctctgtttcggacggacaaagcgga
gagaagcccttggtgttgccctacaaacctcccggctgctccgaggtgtattacgttccc
tgtggaaaaggaaccttaaaactctcacgggtccggtctgagaccactgtggagagctcc
cattcaggctccaacgacgccgtccctccggatttccccccgcaggtcctgggttcgagg
aaggatcatccttcggacatggcaatcgtcagacacaaagagggcatttatagtaagacg
gccgctcccagggtggcctggatggaggagaaagcgggggcagcggcaccgacggtggtc
ggtcccagaggtggccggaatccctcgggatcactccgaacttcccagcctgcctatgaa
tcggatcagcctcctctgaagtcgtttttgaaggatgatccaaatcccgctcccgggaac
aaggctttgggacaagtggatgcggcttctggtgggccagctccttccccccaagattta
cagccacgtaaggggatcctagagagcagcccttccccacggtccgctctgcacccgtcc
caaagggacgaatgctttatcccactgacgggtgaggtagattatagtttccttgaggaa
ataaaatccaagcaggcttcccgacgagactgggccgaggcccaaacgacgagctcggga
agagcgagccaacttcctccaggaagccggtcgattaaggagaagtgggtagcggatctg
ccaagggggccaagcacccatcgaagcagccctttagatgttctttgggccaagtatttg
gagcgacagaaccagcagcagcagctgaagcccatcgaaagcaaccacaaaactcagctc
tcgctggtggagcggctggaccgcctggcccgcctcctgcaaaatcccctccgtcattcc
ctggctcttgccctggaggaccagaaggagcccaggaggagagcagcccggctaggcagc
ccgcgaggcaaaaagatggcggccaggaagaaagcagcgttgcggcccagtgtggagacg
tcggaggaagccctggtgggtccccgtggcgcctggccgtccaaatcccggcacccgaaa
accggccacggcggggctgttgaacccggggctcgaaaccgggacgggggcccggcctct
gagacgccgagcgagacgtcttcggacctgagaccgaggagagacgccagcgtggcgacc
ggcgtgacctccgagtccgaagggactcggctcgagaccgaaagcgccacggcgaccgag
ggcagcgagtcggcgtcgaccatcaacacggccaggttgatccgggctttcgggcaggag
cgagtggaggtgtctcccaaactctcccagctctacagcaccatcgacttgcaaaagacg
cgcttggagagctggcccaagcggggtaggagagccaagggggatggcggcggctacccg
aaaatggttcacctcgaacgaaaagggaacgaggcccagcccagcccgtcttccacgtcc
tccgattccgcctcgagcctcggcagttcccatgggccgagcctggccctgagcagcaag
cggatgtcccataaggccgtccaggcaggagactttgagattgtgaacagcgccaccaag
aagcacactcgcgacgtgggcttgactttccccaccccgactgcaagccaagccacgctc
cacggagggtcgaggagcagggcagagcaggggctggctcagcaccatgggctgtcggca
gaaagcgaggagcagcagaagtggcagccgggcagctttctggaagggaggaggcccaga
aggagccggtcgcagtggacgcaaggcgtgtcttggttcgtcccggcaagagatctaaaa
ccagatgccctggaagaggccgggggtggcttcccacccggcccagtccttgcctggtcc
gagcccccacccagagggaagccgtggcgggaacctctccgcgagcagaactggccggag
cgtctcgggggcctccaggtgcgtctggctgctccagcaagagatgttgagaatgagcct
ccctcccttttggggaaaatgaccctgcaggaatctctcgcaatgcaccgtccggatttc
atttcgagctccggcgaacgtctgaagcgcctcaagctgctcacggaagaaaggaagctg
cagagcgtcttccaggaggagagggaacaattgtttaacccccccgaggcgatgcgttgc
gggaacatagggggtcttgctgaccgag
DBGET
integrated database retrieval system
