Pseudonaja textilis (eastern brown snake): 113452148
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Entry
113452148 CDS
T09005
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03020
RNA polymerase
ptex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113452148 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
113452148 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptex03021
]
113452148 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113452148 (POLR2B)
Enzymes [BR:
ptex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113452148 (POLR2B)
Transcription machinery [BR:
ptex03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113452148 (POLR2B)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113452148 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
113452148
NCBI-ProteinID:
XP_026579360
Ensembl:
ENSPTXG00000016421
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMTVQRIVE
DAPPIDLQAEAQHATGEIEEPPRYLLKFEQIYLSKPTHWERDGAPSSMRPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGFTDRELCEVNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAREVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKPRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPDQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPSRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENKDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMITLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgcggacgaagatatgcaatatgatgaggatgatgatgaaatcactccagat
ctgtggcaagaagcatgctggattgtcatcagctcctattttgatgaaaaaggtctggtt
cgacagcagctggattcttttgatgagttcattcagatgactgtgcaaagaattgtagaa
gatgccccaccaattgatctacaagcagaagctcaacatgctaccggtgaaatagaagag
ccgccacgttatcttttgaaatttgaacaaatttatctgtccaagccaactcattgggaa
agagatggtgctccttcatctatgaggccaaatgaagccaggctcagaaatcttacgtat
tctgcaccactgtatgtggacataactaagacagttattaaggaaggagaagaccagttg
cagacacaacatcaaaaaacattcataggaaaaattccaatcatgctgcgatccacatac
tgcctattaaatggtttcactgatcgtgaactttgtgaagtgaatgaatgccctcttgat
cctgggggctattttattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtatatgtatttgcaaagaaagattctaaatatgcatacacaggagag
tgtcgttcttgcctggagaactcatctcgaccgacaagtactatatgggttagcatgtta
gccagaggtgggcagggtgcaaagaagagtgcgataggtcaacgtattgtggcaactttg
ccatatatcaagcaggaagtgcccatcatcattgtgttccgtgcattggggtttgtatcc
gacagagacatcttggagcatataatttatgactttgaagatcctgagatgatggaaatg
gttaagccctctttggatgaagcatttgtcattcaggaacagaacgttgcattgaatttc
attggttcaagaggtgcaaagcccggtgtcactaaagagaagagaatcaagtatgccaga
gaagtcttacagaaagaaatgcttccacatgttggtgtcagtgacttctgtgaaacaaag
aaggcttattttcttggatacatggttcatagattgttgctagcagccttagggagacgg
gaactagatgatagggatcactacggcaacaagcggcttgacctggcaggacctttgctt
gctttcctcttcagaggaatgtttaagaatttgctgaaagaagttagaatatatgcccag
aaatttatagacagaggcaaagattttaacttggagttggcaattaaaccaaggattata
tcagatggtttgaaatattcattagcaactggcaactggggagatcagaagaaagctcac
caggctagagctggagtatcacaagtattgaatcgtctcacctttgcttctacactttcc
catttgcgacgtttaaactcacctattggaagagatggtaaactagcaaagcccaggcag
ttgcacaacactttgtggggaatgatctgtcctgctgaaactccagagggtcatgctgtg
gggcttgtgaagaatcttgctctgatggcctatatttctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaacttggaagaaatctctccagcagca
attgcagatgccacaaaaatatttgtgaatggttgctgggttggaattcacaaagatcca
gatcagcttatgaatacgctgagaaaactgcgacggcaaatggatatcattgtatcagag
gtgtccatgatcagagatatcagggagcgagaaattcgcatttatactgatgctggtagg
atctgccgcccacttctcattgtggaaaaacaaaaattgttactgaagaagaggcatata
gaccaattgaaagaacgtgaatataacaactacagctggcaggatttggtggccagtggt
gtagtcgaatacattgacactctagaagaggagactgttatgctggctatgactccagat
gacttacaggagaaaggtgtggcctattgttccacatatacacactgtgagattcatccc
tccatgattctaggagtttgtgcatctattattccatttccagatcacaatcagtctcct
aggaatacataccaatctgctatgggcaaacaagccatgggagtttatatcactaatttc
catgtccgcatggatacactggcccacgttttatattatcctcagaagcctcttgtgacc
acacgttctatggaatatttgaggttcagggagttgccagcaggcatcaactctatagtc
gccatagcttcatatacaggatataatcaagaagactctgttatcatgaaccgctctgct
gttgacagaggttttttcagatctgtgttctatcgctcgtataaagaacaggagtcaaaa
aaaggatatgaccaagaagaagtgtttgagaaacctagtcgtgaaacatgccaggggatg
aggcatgccatctatgacaagctggacgacgatggtttgattgcacctggtgtacgtgtc
tcaggagatgatgtcatcattggcaagacggtaactttgcctgagaacaaagacgaactg
gagagcaccaatcgtcgctataccaaaagggattgcagcacttttctacgaactagtgaa
actggtatcgttgaccaggtcatgattaccttgaaccaggaaggatacaagttttgtaaa
ataagagtacggtctgtccgaataccacagattggagataagtttgctagcagacatggt
cagaaaggtacctgtggtatccaatacaggcaagaggatatgccatttacctgtgaaggc
atcactcctgatatcattatcaatccgcacgctatcccttcgcgaatgaccattggtcac
ttgattgaatgtcttcaaggaaaggtatcagcaaataaaggggagataggtgatgctaca
ccttttaacgatgcagtcaacgtgcagaagatttcaaacttgctctctgattatgggtat
catctgagaggaaatgaggttctgtacaatggctttactggtcgcaaaatcacatcacag
atctttatcggccccacttactatcagcgactaaaacacatggtagatgataaaattcat
tccagggcaagaggacctattcagatccttaacaggcagcctatggagggtcgatctcgt
gatggaggtcttcggtttggagagatggaacgagactgtcagattgctcatggagcagcg
cagttcctaagggaaagattgtttgaagcctcagatccgtatcaggttcatgtatgcaac
ttgtgcgggctaatggcgatagcaaacacccggacccacacctatgaatgcaggggttgt
cgtaataagacacagatttctctggtgaggatgccatatgcctgcaaactacttttccaa
gaactgatgtcaatgagtattgcacctcgaatgatgagtgtgtag
DBGET
integrated database retrieval system
