KEGG   Pseudonaja textilis (eastern brown snake): 113452423
Entry
113452423         CDS       T09005                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex03030  DNA replication
ptex03410  Base excision repair
ptex03420  Nucleotide excision repair
ptex03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113452423
   03410 Base excision repair
    113452423
   03420 Nucleotide excision repair
    113452423
   03430 Mismatch repair
    113452423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptex03032]
    113452423
   03036 Chromosome and associated proteins [BR:ptex03036]
    113452423
   03400 DNA repair and recombination proteins [BR:ptex03400]
    113452423
DNA replication proteins [BR:ptex03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113452423
  DNA Replication Termination Factors
   ELG1-RFC complex
    113452423
Chromosome and associated proteins [BR:ptex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113452423
DNA repair and recombination proteins [BR:ptex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113452423
  Check point factors
   HRAD17(Rad24)-RFC complex
    113452423
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_22 AAA_16 AAA_14 Viral_helicase1 AAA_24 AAA_11 Mg_chelatase Rad17 MipZ RuvB_N nSTAND3 DEAD AAA_18 AAA_5 RCF1-5-like_lid AAA_19 AAA_30 AAA_28 AAA_25 ABC_tran DNAX_ATPase_lid AAA_23 MeaB RNA_helicase SLFN-g3_helicase NTPase_1 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 113452423
NCBI-ProteinID: XP_026579664
LinkDB
Position
Unknown
AA seq 241 aa
MAAPGTGKLLEGGKEGGSAADVASTSTSPAGSGHYELPWVEKYRPMKMLEIVGNEDTVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGSALKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQILMRLMKIIAKENVQYTDDGLEAIIFTAQGDMRQVSNVFLQL
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcggcacccggtacggggaagttgcttgaaggagggaaagaaggcgggagcgctgct
gatgtcgcctctacttctacttctcccgccgggagcggccattatgaattgccctgggtt
gaaaaatacaggccaatgaagatgttggaaattgttggcaatgaagacactgttagcaga
ttagaggtgtttgcaagagaaggaaatgttccaaatattattattgctggcccaccagga
accggtaaaaccaccagcatcctttgtctggctcgtgcacttctgggctctgcattgaaa
gatgccgttttggagctcaacgcatcaaatgacagaggcattgacgttgtcaggaacaaa
atcaagatgtttgcacaacaaaaagtgacacttccaaaaggccgacataaaataattatc
ttggatgaagcagacagcatgacagatggagcccagcaagccttgagacgcactatggaa
atttattctaaaacaactcgttttgctctggcttgcaatgcttctgacaaaatcatagaa
cccatccagtctcgctgtgcagttctgcgatacactaagctaacagatgcccagattctt
atgaggctaatgaaaatcattgcgaaggagaatgtacaatatacagatgatggtctagaa
gccattatcttcacagcccagggagacatgaggcaggtgagtaatgtcttcctgcagctt
ctttaa

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