Candidatus Profftia tarda: PROFFT_A_00110
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Entry
PROFFT_A_00110 CDS
T07286
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptf
Candidatus Profftia tarda
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptf03021
]
PROFFT_A_00110 (rpoH)
Transcription machinery [BR:
ptf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PROFFT_A_00110 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_DeoR
SANT_DAMP1_like
UPF0231
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
CAD6506836
UniProt:
A0A8E4EZK8
LinkDB
All DBs
Position
1:25337..26203
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AA seq
288 aa
AA seq
DB search
MERMEMTREIQAIRLIPQGSLEGYMRAVSTYPMLTMEEEKKLGERLHYTADLDAAKQLIL
SHLRFVVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEIGVRLVSFAVHWIKAEIHE
YVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSEQDVREMESRM
SAQDMAFDILNDEDDSSSTAPALFLQDKFSDFANDIEGDNWDNHTADQLSVAMESLDERS
KHIIHARWLEDNNKSTLQDLAEQYGVSAERVRQLEKNAMKKLRCAIEN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
attgagaggatggaaatgaccagagagattcaagctataagattaattcctcaaggtagc
ctggaaggctatatgcgtgctgtaagcacttatcctatgctcacaatggaggaagagaaa
aaattaggcgaacgactgcattacacggctgatctagatgcagcaaaacagctcatccta
tctcacctgcgctttgtagttcatgtggcgcgcaactatgccggatatggcctaccacag
gctgatcttatccaggagggcaatattggtctaatgaaagcagtacgccgttttaatcca
gagataggcgttcgacttgtatcttttgctgttcattggatcaaagcagaaatacatgaa
tatgtgctacgtaattggcgtattgtaaaagttgctacaactaaggcacaacgtaagctt
ttttttaatttgcgtaaaacaaagcagcgcttgggatggtttaatcaagatgaagtagaa
ctagttgctcgtgagcttggagtttccgagcaagatgtaagagaaatggaatctcgcatg
tctgctcaggatatggcttttgatatacttaacgatgaggatgatagttcttctacggca
ccggccttattcttgcaggataaattctctgatttcgctaatgatatagaaggtgataac
tgggataaccacactgccgatcagctgagtgtagcgatggagtccctggacgaacgtagc
aaacatatcatccatgcgcgctggctagaagataataataagtcaacccttcaggaccta
gctgaacaatacggcgtatctgcggagcgcgttcgtcaacttgaaaagaatgcaatgaaa
aaattgcgttgtgcaattgaaaattaa
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