Candidatus Profftia tarda: PROFFT_A_00440
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Entry
PROFFT_A_00440 CDS
T07286
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PROFFT_A_00440 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_00440 (ung)
Enzymes [BR:
ptf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PROFFT_A_00440 (ung)
DNA repair and recombination proteins [BR:
ptf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PROFFT_A_00440 (ung)
Prokaryotic type
PROFFT_A_00440 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD6507178
UniProt:
A0A8E4EXV1
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All DBs
Position
1:96927..97598
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AA seq
223 aa
AA seq
DB search
MYSSLNWHDVIGVEKEKPYFYKILSFLSSERRAGKIIYPPQKDIFNAFRFTAFKDVKVVI
LGQDPYHGPDQAHGLSFSVLPGISIPPSLMNIYKELQADIKGFNIPNHGCLKSWSDQGIL
LLNTILTVEAGQPHSHAKIGWDNFTDSVVSALNEYRKGIVFLLWGAYAHKKGNRICAHKH
WVLKASHPSPMSAHSSFLGCRHFSITNQLLVEQGISMIDWQPS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtattcttcattaaactggcatgatgttatcggcgttgagaaagaaaaaccttatttt
tataagattctctccttcctttcttcggagcgtcgagccggtaagatcatttatcctcct
caaaaagatatattcaacgcttttcgatttactgcttttaaagatgttaaagtagttatt
cttgggcaagacccctaccatggtcccgatcaggcacatggtctatctttctcagttctt
ccgggcatatcaatacctccttctcttatgaatatttataaagaacttcaagccgatatt
aagggatttaatatacctaatcatggctgtctaaaaagttggagtgatcaaggaattttg
cttctcaacacaatactaaccgtagaggccggtcagcctcattcacatgctaaaatagga
tgggataactttacagattcagtagtttctgcgcttaatgagtatcgcaaaggcattgtt
tttctgttgtggggtgcttatgcacacaagaaaggaaatagaatttgtgcgcataagcac
tgggttttaaaggcttctcatccatcccctatgtcggcacatagcagttttttaggatgt
cgtcacttctctataaccaatcagttactggtagaacagggtatatcgatgattgactgg
cagccttcttaa
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