Candidatus Profftia tarda: PROFFT_A_00650
Help
Entry
PROFFT_A_00650 CDS
T07286
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PROFFT_A_00650 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_00650 (mutM)
Enzymes [BR:
ptf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PROFFT_A_00650 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PROFFT_A_00650 (mutM)
DNA repair and recombination proteins [BR:
ptf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PROFFT_A_00650 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-Tnp_2
Motif
Other DBs
NCBI-ProteinID:
CAD6507415
UniProt:
A0A8E4GIG3
LinkDB
All DBs
Position
1:140412..141227
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETICRGITPFLVGNVIEYLIVRQFKLRWPVSDELVIIREKLVLSVRRCAKYLL
IELTDGWIIVHFGMSGSIRILPFQKSAQKHDHIDVILSNGTVLRYTDPRRFGAWIWCKEL
NSLKIIAALGPDPLTDQFDGDYIFRKSRNKKTLIKSWLMDHKVVVGIGNIYASESLFTAR
ISPIRAVGLLTEADAELLVISIKSVLMRSIELGGTTLRNFSQVDGKPGSFVKELQVYGRA
GKNCLVCGQKILSRKQGHQRTTFFCPVCQKY
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaactatttgtcgtggaattacaccctttttagttggt
aatgtcattgaatatttgatagttcgtcaattcaagctgcggtggccagtctctgatgag
ttagttataataagagagaaattagtgctgagcgtaaggcgatgcgctaagtatctttta
attgaattaacagatggatggatcattgtccattttggtatgtctggcagcatacgtatt
ttgccatttcaaaaatctgctcagaagcatgatcatattgatgtgatcttgtctaacggt
actgtgctgcgctatacagatcctcgccgctttggagcttggatttggtgtaaagaacta
aattcattaaagataattgctgctctaggacctgatcctcttactgatcagtttgatggt
gactatatatttcgtaagtctcgtaacaagaagactcttattaagtcttggctgatggat
cataaagttgttgttggaataggtaatatctatgctagtgagtcgttatttaccgctcgt
atcagcccaattagagcagttggattgctgactgaagcagatgcagaattgttggttata
tcaattaaatctgtactaatgcgttcaattgagctcggaggcacaactctaagaaatttc
tctcaggtagatggcaagccaggatctttcgtaaaagaactacaagtatatggccgagca
ggaaaaaattgtcttgtgtgtggtcaaaaaatattaagccggaagcagggtcatcagcgt
acgacatttttttgccctgtttgccagaaatattag
DBGET
integrated database retrieval system
