Candidatus Profftia tarda: PROFFT_A_01240
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Entry
PROFFT_A_01240 CDS
T07286
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03030
DNA replication
ptf03430
Mismatch repair
ptf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PROFFT_A_01240 (dnaQ)
03430 Mismatch repair
PROFFT_A_01240 (dnaQ)
03440 Homologous recombination
PROFFT_A_01240 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptf03032
]
PROFFT_A_01240 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_01240 (dnaQ)
Enzymes [BR:
ptf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PROFFT_A_01240 (dnaQ)
DNA replication proteins [BR:
ptf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PROFFT_A_01240 (dnaQ)
DNA repair and recombination proteins [BR:
ptf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PROFFT_A_01240 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAD6508051
UniProt:
A0A8E4F121
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All DBs
Position
1:254980..255747
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AA seq
255 aa
AA seq
DB search
MIVSQDYKISDNGIIDMIKTRQIILDTETTGINKNGCHYEGHQIIEIGAVELINRRLTKS
NFHVYIKPDRLVTPEAYSIHGISNEFLLDKPNFSKIANKLLEFISGSELIIHNAPFDIGF
LNYELRNLNRYAPTIEECCQITDSLVIARQLFPGKRNSLDALCNRYEIDNTKRKLHGALL
DSKILAEVYLRMTGGQTSLNFSIELEEKMPSINGELQKIVRTSQRLKVVRANKQELSKHD
HCLDLLKGSRCLWRD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ctgatcgttagtcaagattataagatatcagataatggtattatagatatgataaagact
agacagattatccttgataccgaaactactggtataaataaaaatggatgtcattatgaa
gggcatcagataattgaaattggtgctgtagagttaattaatagacgtttaaccaaaagc
aattttcatgtttatattaagccggatcgccttgttacccctgaagcatatagcattcac
gggattagtaatgaatttttgttagataaacctaacttttctaagattgccaataaatta
ctagagtttataagtggttctgagcttattattcataatgcaccatttgatattggtttt
ttaaactatgagctacgcaacctcaataggtatgcacctacgatagaagagtgctgtcaa
ataaccgatagcctggttatagcacgccagctatttccaggtaaacgcaatagtttagat
gctctatgcaatcgatatgaaatagataatactaaacgtaaactgcatggggctttacta
gattccaaaattctggctgaagtttatttaaggatgacaggagggcaaacctctttaaat
ttctcgatagaacttgaagagaaaatgccatctataaacggcgaattacaaaaaatagtc
cgtacatctcagagattaaaagttgttagagcaaataagcaagaattatccaaacatgat
cactgccttgatctattaaaaggaagcaggtgtttatggagagattaa
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