Candidatus Profftia tarda: PROFFT_A_02000
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Entry
PROFFT_A_02000 CDS
T07286
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ptf
Candidatus Profftia tarda
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptf03009
]
PROFFT_A_02000 (ycaO)
Ribosome biogenesis [BR:
ptf03009
]
Prokaryotic type
ribosomal protein modification factors
PROFFT_A_02000 (ycaO)
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
CAD6508822
UniProt:
A0A8E4H407
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All DBs
Position
1:404315..406072
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AA seq
585 aa
AA seq
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MIQTYIPGKDDSLEASIMHFQQQLTKFGYNIEEVSFLNPVPNVWSVHIRDRDCHICSANG
KGSSKKAALASALGEYIERLSTNYFFADFYLGLEIAEGEFVHHPNEKWFRVPSDDSLPDR
ILDESLHKFYNPFDEVCGKDLIDLQSGNLDRGICTLPFTRQSDQKTIYIPINIIDNLYAS
NGMSAGNTRNEARVQAMSEVLERYVKNLIISEYICLPEIPSSVMNRYPRVVESIVRLRQE
GFPILSFDASLGGKYPVTCIVLFNPINGSCFASFGAHPDFGVALERTLTELLQGRSLKDL
DVFSPPTFNYAQVSDISNLETHFIDSSGVISWDMFKKNSDYEFVDWSFKGNTQESCNILM
KIFKRQDKEVYIADYEQLEVYTCRIIVPGISEIYPPEDLLLANNNMGSHLRKQILQLPAS
NLSKRNYLQIIDQLDDELIDDFTRVRELLGIATGTNNSWYTLRIGELKAMLALAGGDLKK
ALIWTDWTQEFNFSLFSYDRINFYRCLKDLLTLNVEGNREPKNYYYAFSLMYGSDILEKA
LDITVGKKRFYDLPAVDDSFKALPAHQALLQSYKKLQVAKYYSLN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaacctatattccaggtaaagatgattcattggaagcctctataatgcatttc
cagcagcaattgactaaatttgggtacaatattgaagaagtatctttccttaatcctgtt
cctaatgtttggtctgttcacatacgagatcgagattgccatatttgctctgccaacggt
aaaggaagtagtaaaaaagctgccttggcatctgctttaggtgaatacattgaacgttta
tctactaactatttttttgcagatttttatcttggcctcgaaattgcagaaggtgaattc
gtgcatcatcctaacgagaaatggttcagagtgccatctgacgatagcctaccagacaga
attttagatgaaagtttgcataaattttataatcctttcgatgaagtatgtggtaaagac
cttatcgatttacaatccggaaatctagaccgtggtatttgtacgctgccttttacacgt
cagtctgaccagaaaactatttatattcctataaatatcattgacaatctttacgcatca
aacggtatgtctgctggtaatacccgtaacgaagcacgtgtacaagctatgtctgaagtg
ttagagcgttacgtaaaaaatttgattatttctgaatatatttgcctaccagaaatacca
tctagtgttatgaatcgatatcccagagttgttgaatctatagtaagattaaggcaagaa
ggttttccaattctatcttttgatgcttcactaggtggtaagtatccagttacttgtatt
gttttatttaaccctattaatggtagttgctttgcatcatttggtgcgcaccctgacttc
ggggttgcattagaacgtactcttactgagttgttgcagggacgaagtttaaaagatttg
gatgtattttctccaccaacttttaactatgctcaagtcagcgatatatctaatctagaa
acgcatttcattgactctagtggtgtaatttcttgggatatgttcaagaaaaattcagac
tatgagttcgtcgattggtcctttaaaggtaatactcaagaatcatgtaacatactaatg
aaaatatttaaaaggcaagataaagaggtgtatattgcagactatgagcaacttgaagtt
tatacttgccgtataatagtaccgggaatctctgaaatttatcctcccgaagatttacta
ttggctaataataatatgggttcgcatttacgcaagcagatcctacaattacctgcttct
aatctcagcaaacgaaattatctacaaattatagatcaactcgatgatgaattaattgac
gattttactcgtgttcgagaactacttggtattgcgacgggtacgaataatagttggtac
actctccgtattggtgaactaaaggcaatgctggctctagctggcggtgatcttaagaaa
gctcttatttggactgactggacacaggaatttaatttctcgctattcagttacgatcgt
attaatttttatcgttgcttaaaagacttactgactcttaatgtagaaggaaatagagaa
ccgaaaaattattattatgcatttagccttatgtatggctctgatatattagaaaaagct
ttagatattactgttggtaaaaagaggttctatgatcttcctgccgtagatgatagtttc
aaggcattacctgcacatcaggcattattgcaatcttacaagaagttgcaagttgcaaaa
tattattcactaaattaa
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