Candidatus Profftia tarda: PROFFT_A_02200
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Entry
PROFFT_A_02200 CDS
T07286
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PROFFT_A_02200 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_02200 (recC)
Enzymes [BR:
ptf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PROFFT_A_02200 (recC)
DNA repair and recombination proteins [BR:
ptf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PROFFT_A_02200 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAD6508999
UniProt:
A0A8E4EY71
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All DBs
Position
1:446753..450127
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AA seq
1124 aa
AA seq
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MFIVYHSNTFYMLKHIIAELMESQSLQNPLEQEVILLQCHGIAEWVQIELAKQLGIAANI
KFSSPSTFIWNLFTILIPGLPKDNVFNKDVMTWKLMWLLSAKLDHEAFGLLENYIANDTD
NRKHYQLASCLADLYKQYLVYRPEWINLWEQGILIDGLDESQRWQALLWVALKENTTNLT
HPALHIANLYKKCKSILEHATECPLGLPKRIFIYGIISLPPIYLDILKALGNHIDVHLMF
NNPCRHNWHDIKDDGCLDKTQNSKIYYNIKQPNTIAISKNYQRLYDPFKAGRSQERINPL
LASWGMLGSDYINLLSQCDLKEVYAFVELTQDNLLTRIQRDILELENHSKVTNSSEEINN
SIGKRLLNIGDRSISINLCHTPHHEIEMLHNRLLDLFNEDLSLVPDDVIVIAADLDIYRP
FIQAIFGNTSCQNYIPFSISDCKISQENPVIQTFLMLLDLPNSRFTSQNVWSLLELPSLA
EHYGFNKEDLDFLHHWINDSGIRWGLNNNNILRLSLPIIGQNTWQFGLTRMLLGYAMDSD
AGDWNGVLPYNESSGLIAELVGKLADFLMKLDQWSVRLSTEYTLQEWQPVCREIINDFFV
QNTKTKVIHNFIDQKWRNIISHGMQAEYPRVIEISILRDKLVSSLDKQNIRQCFLSGYVN
FCTLKSMTSIPFKVVCLLGANDSAFKDTTVPMSFDLIARHPACGDINSRSYNRYLFLEAL
LSAQKYFYISYISRSIQDNSLRNPSIMVSELIEYIAQSHYIAGDESMDLDCSAERVTEYL
QIKHELNSFKTGSYLKTSERQSYNSDWLRDVSAIGETSKYFGLPLPPETLSVITLDELIR
FYRHPVRAFFQMRLGVNFSLELNKLSDEEPFVVDYINNYTINSQILNRLINDGDINTLFR
KFSSAGVLPYGVFSHIYFAKQAQEMLDLAVKVKQYLQPNRSIEIDSIISGIQITGSLDHI
QDSGLVRYRPAVLGIIDGMTLWIEHLFYSLSGGKGESHFFGRKNSAWHFPPLSLKDAEKE
LLPLLIGYCNGRSSPLLLLPRASWAWLKACFDKHTNAVNWDHEIQVKAQMKFLCSWQGDY
RMTGDRSDPYIQRVMPTLDNEQICYLQKLSEQYYSPLARNNLAS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtttattgtttatcattcaaatacattttatatgcttaagcatataattgctgaacta
atggaaagtcaatccttgcagaatcctttagaacaagaagttatcttgttacaatgccat
ggtatagcagaatgggtgcaaatagaattggctaaacaattaggtattgcagctaatatt
aagttttcttccccttctacttttatatggaatttatttactattttaataccaggtctc
cccaaagataatgtttttaataaagatgtaatgacttggaaactgatgtggttattatcc
gcaaagttagatcatgaagcatttggtcttttagagaattatatagctaatgacacagat
aatcgtaaacattatcaactcgcatcctgcttggctgatctttataaacaatacttagta
tatcgtccggaatggataaatctttgggaacagggtattttaatagatggactagatgaa
tcacagaggtggcaggcgctcttgtgggtagcgttaaaagagaatactactaatcttaca
catcctgcattgcatattgctaatttatataaaaagtgtaagtccatattagaacatgcc
acagagtgtccgctagggctgcccaagcgtatttttatttatggaattatatcattaccc
ccaatctatttagatattttaaaagcattaggaaatcacattgacgtgcatttaatgttt
aacaatccttgtcgacataattggcatgatattaaagatgatggatgtctagataaaaca
cagaatagtaaaatttactataatattaaacagcctaatactattgctatatctaaaaat
tatcagagattatacgatccttttaaagcaggtcgtagtcaagaacggattaatccttta
ctggcatcctggggaatgttgggaagtgattatataaatctcttatctcagtgtgatcta
aaggaagtatatgcctttgttgaattaactcaagataacttacttactcgtattcaaaga
gatattctagagttagaaaaccatagtaaagtcacaaatagttcagaagagattaataat
agcataggaaaaagactattaaatataggagatcgcagcattagcataaatctctgtcac
actccgcatcatgaaattgaaatgttacacaatagattactggatctgtttaatgaagat
ctttctctggttccagatgatgtcatagtcattgctgcagatcttgatatctataggcct
tttatacaggccatttttggcaatactagttgtcaaaactacatacctttttctatttct
gactgtaaaattagtcaagaaaatccggttattcagacgtttctaatgttgcttgactta
cctaatagtcgatttacctctcagaatgtttggtctttgctagaattaccatctttagct
gaacattatggtttcaataaagaagatctagattttttacatcattggattaatgattct
ggtattcggtgggggttaaataataataatatactaagactaagcctgccaataatagga
cagaatacatggcagtttggtttaacacgcatgttgcttggatatgcgatggacagcgat
gctggggattggaacggggtacttccttataatgaatccagtgggctgattgcggaatta
gttggtaaattagctgattttttaatgaagcttgatcaatggagtgtccgacttagcacg
gaatatacgttgcaagaatggcaaccagtatgtcgtgaaatcattaatgatttcttcgtt
caaaatactaaaactaaggtaattcataactttatagatcagaaatggcgaaatattatt
agtcatggaatgcaggctgagtatccgcgggttatagaaatatcgattcttcgtgataaa
ttggtatcaagtttggataaacaaaatataagacaatgctttttatctggatatgttaac
ttctgtactcttaagtctatgacttcgatcccattcaaagtagtttgtctactaggtgca
aatgatagtgccttcaaggatactactgtgccgatgagctttgacctaatagctcgccat
cccgcatgtggcgatataaacagtagatcttataatcgatacttgttccttgaagcactg
ctatcagctcagaaatatttctatatcagttatataagtaggtctattcaggataattct
ctacgtaatccatcaatcatggttagcgaacttatagaatatattgcccaaagccattat
atagctggagatgagtctatggaccttgattgcagtgcagagcgagttactgaatatcta
cagattaagcatgaattgaattcttttaaaacaggaagctacttaaagactagtgaaaga
caaagctacaatagtgattggttgcgtgatgtttcagctattggtgaaacatctaaatat
tttggtctaccattgcctccagaaaccctttctgtcattactctcgatgagcttattcgt
ttttatcgtcatcctgtgcgcgccttcttccagatgcgtcttggggtgaacttctcatta
gaattaaacaaactaagtgacgaagaaccttttgtggtggattatattaataattatacg
ataaatagccagatattgaaccggttgataaacgatggcgatattaatactctatttcgt
aagtttagttcagctggtgttttaccttatggtgtttttagtcatatttattttgcaaaa
caagcgcaagaaatgctagaccttgctgtaaaggtaaaacaatatctacagcctaaccgc
agcattgagattgatagtattatcagtggtatacagataacaggttctttagaccatata
caggatagcggtttagtacgttatcgtcctgctgtattaggtattatagatggtatgacg
ttatggattgagcatctgttttattctttaagtggcggtaaaggtgagagtcattttttt
gggcgtaaaaactcagcttggcattttcctcctttatccttaaaagatgctgaaaaagaa
ctattgccattattaattggttattgcaatggtcgcagcagtccactcctcctgctacct
agagctagctgggcatggcttaaggcatgttttgataagcatacaaatgcagttaattgg
gatcatgaaatacaagttaaagcacaaatgaagtttttatgttcatggcaaggtgattat
agaatgacaggggataggtcagatccttatatacagagagtgatgccaaccttagataat
gagcagatatgctatcttcagaaattgtctgaacagtattattcgccattggcacgcaat
aatttagcctcatag
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