KEGG   Candidatus Profftia tarda: PROFFT_A_03260
Entry
PROFFT_A_03260    CDS       T07286                                 
Symbol
hns
Name
(GenBank) DNA-binding protein H-NS
  KO
K03746  DNA-binding protein H-NS
Organism
ptf  Candidatus Profftia tarda
Brite
KEGG Orthology (KO) [BR:ptf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptf03036]
    PROFFT_A_03260 (hns)
   03400 DNA repair and recombination proteins [BR:ptf03400]
    PROFFT_A_03260 (hns)
Chromosome and associated proteins [BR:ptf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    PROFFT_A_03260 (hns)
DNA repair and recombination proteins [BR:ptf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PROFFT_A_03260 (hns)
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS DUF3037 TetR_C_24 IL2 PaaX_C DUF6626 MHC_I CR6_interact
Other DBs
NCBI-ProteinID: CAD6509965
UniProt: A0A8E4F1C2
LinkDB
Position
1:complement(641032..641454)
AA seq 140 aa
MRLKQMSEALKILNNIRTLRAQARECILETLEEMLEKLEVVVQERRAEENQAQAEIEDRT
RKLQQYREMLIADGIDPNELLQSMSDCKVPSKSKRLTRPAKYQYINKNNETKTWTGQGRT
PTTIKQAIEEQGQSLEDFLL
NT seq 423 nt   +upstreamnt  +downstreamnt
ttgagattaaaacaaatgagcgaagcgttaaagattctgaataacatacgcactcttcgt
gcgcaagctagagaatgtattttagaaactctggaagaaatgttggagaagttagaagtg
gtagtgcaagaacgtcgtgcagaagaaaaccaagctcaagcagaaatcgaagatcgcaca
cgcaaattacaacaatatcgtgaaatgcttatcgcagatggcattgaccctaacgaacta
ctacaaagtatgagtgattgcaaggtacctagtaaatcaaaacgtcttacacggccggct
aagtatcaatatatcaataaaaataacgaaactaaaacttggacgggtcaagggcgtact
cctacaactattaaacaagctatagaagagcaaggtcagtctctagaagattttttactg
taa

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