Candidatus Profftia tarda: PROFFT_A_03490
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Entry
PROFFT_A_03490 CDS
T07286
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptf
Candidatus Profftia tarda
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptf03016
]
PROFFT_A_03490 (truB)
Enzymes [BR:
ptf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PROFFT_A_03490 (truB)
Transfer RNA biogenesis [BR:
ptf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PROFFT_A_03490 (truB)
Prokaryotic type
PROFFT_A_03490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
CAD6510181
UniProt:
A0A8E4H467
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All DBs
Position
1:679731..680708
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AA seq
325 aa
AA seq
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MPRPIKYGRDVNGILLLDKQAHFSSNEMLQKIKRIYSANKAGHTGTLDPLAVGMLPICLG
ESTKFSQFLLGANKTYRVVARLGQRTNTSDANGEIIEERPINFSHIQLNNALKNLRGHIK
QVPSMYSAIKYQGKPLYQYARQGIVVPLKPRDITIYTLDCIRCTKDTLELEIQCSKGTYI
RTIIDDLGISLGCGAHVIYLRRLQVSSYYPEHMVTLEKLEKIVATAQKNYTEKNTILDSL
LLPVETAVSHLSEINIGDITAAHLMQGQQVEIQGLTSKEMVRIYAGKERIFIGVGNVDHK
GCLVPRRLLNSKYKMCERESRAHRG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccacgacctataaaatacggcagagatgttaatggcattcttttattagataagcaa
gcacatttctcttcaaatgaaatgttacagaaaataaagcgcatctatagcgctaataaa
gcagggcataccggtacgttagatcctctagcagtaggcatgcttcctatttgtttggga
gaatccactaagttttcccaatttttgttgggagcgaacaagacatatcgtgttgttgct
cgtttaggtcagcgcactaatacctctgatgctaatggcgaaataattgaagaaagacct
attaatttttcacacatacaacttaacaatgctcttaaaaatttgcgtggtcatattaag
caagtgccatcaatgtattctgctattaaatatcaaggtaagccattataccaatatgcg
cgtcaaggcatcgtggtgcctcttaaacctcgtgatattaccatttatacgttagactgt
atccgctgtacaaaagatacattagagctagaaattcaatgctctaaaggtacttatata
agaactattattgatgacttaggcatatctttaggttgtggtgcacatgttatctattta
cgcagattacaagtgtctagctattatccagagcacatggtaactctcgagaaattagaa
aaaatagttgccactgcacaaaaaaattatactgaaaagaacacaatactagactcactc
ttattgccagtagagacagcggtctcacatttatcagaaataaatataggcgatattacg
gctgctcaccttatgcaaggacagcaagtggaaatacagggtttaactagtaaagaaatg
gtacgcatatatgcaggtaaagaacgtatatttattggtgttggtaacgttgatcataaa
ggatgtttagtaccacgtcgcttattgaatagtaaatataagatgtgcgaaagagaatca
cgtgctcatcgcggatga
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