Candidatus Profftia tarda: PROFFT_A_04480
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Entry
PROFFT_A_04480 CDS
T07286
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ptf
Candidatus Profftia tarda
Pathway
ptf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PROFFT_A_04480 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptf03021
]
PROFFT_A_04480 (rpoA)
03400 DNA repair and recombination proteins [BR:
ptf03400
]
PROFFT_A_04480 (rpoA)
Enzymes [BR:
ptf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PROFFT_A_04480 (rpoA)
Transcription machinery [BR:
ptf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PROFFT_A_04480 (rpoA)
DNA repair and recombination proteins [BR:
ptf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PROFFT_A_04480 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CAD6511115
UniProt:
A0A8E4EYW1
LinkDB
All DBs
Position
1:complement(832150..833139)
Genome browser
AA seq
329 aa
AA seq
DB search
MQVSVTEFLKPRLVDIEQLSSTHARITLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKLQGKNEVILNLYKSGIGPVTASDISYNSN
IEIVKPKYVICHLTDKNASISMRIKIQRGRGYVPASARINSEEDERPIGRLLVDACYSPV
ERIVYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVREP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRSLSLGMRLENWPPASIVDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttctgtgacagaatttctaaaaccgcgcttagtagatatcgagcaactaagt
tcgacacacgccagaattaccctagagccgttagagcgtggcttcggtcataccctaggt
aacgcattacgccgtattctgctatcgtctatgccgggttgtgcagtgacagaagttgag
attgatggagtactacatgaatatagtactaaagagggggtacaagaagatatcttagaa
atacttctcaacctcaaaggattagcagtgaaactgcaaggcaaaaacgaggtaatactg
aacttatataaatctggtattggtcctgtgacggcttctgatataagctataatagtaat
attgaaatagtcaaacccaaatacgtcatctgtcatctaactgataaaaacgcatcaatt
agtatgcgtattaaaattcagcgtggtcgtggttatgtgcccgcttcagcacggattaat
tcggaggaagatgagcgtccaataggtcgtctattagttgatgcctgttatagtcctgta
gagcgtattgtttacaatgttgaagcagctcgtgttgaacagcgcaccgacctcgacaag
ttagttatagagatggaaactaatggtacgattgaccctgaagaatcaatccggcgtgca
gcaactatattggctgaacaacttgaagctttcgttgatcttcgtgatgtgcgtgaacct
gaggtaaaagaagaaaaaccagagtttgatccgattttgctgcgtcctgttgatgatcta
gaactgactgtacgttctgctaattgcctgaaagcagaagctattcactacattggagat
ctggtccagcgcactgaagttgagttgctaaaaacgccaaatttgggtaaaaaatctctt
actgaaattaaagacgtattagcctctcgtagcttatctcttggtatgcgcctagaaaac
tggccgccagctagtattgttgatgagtaa
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